GenomeNet

Database: Pfam
Entry: DUF1938
LinkDB: DUF1938
Original site: DUF1938 
#=GF ID   DUF1938
#=GF AC   PF09153.6
#=GF DE   Domain of unknown function (DUF1938)
#=GF AU   Sammut SJ
#=GF SE   pdb_1mgt
#=GF GA   22.10 22.10;
#=GF TC   22.80 76.30;
#=GF NC   22.00 22.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   10497033
#=GF RT   Hyperthermostable protein structure maintained by intra and
#=GF RT   inter-helix ion-pairs in archaeal O6-methylguanine-DNA
#=GF RT   methyltransferase. 
#=GF RA   Hashimoto H, Inoue T, Nishioka M, Fujiwara S, Takagi M, Imanaka
#=GF RA   T, Kai Y; 
#=GF RL   J Mol Biol. 1999;292:707-716.
#=GF DR   INTERPRO; IPR015236;
#=GF DR   SCOP; 1mgt; fa;
#=GF CC   Members of this family, which are predominantly found in the
#=GF CC   archaeal protein O6-alkylguanine-DNA alkyltransferase, adopt a
#=GF CC   secondary structure consisting of a three stranded antiparallel
#=GF CC   beta-sheet and three alpha helices. Their exact function has
#=GF CC   not, as yet, been defined, though it has been postulated that
#=GF CC   they confer thermostability to the archaeal protein [1].
#=GF SQ   18
#=GS I6U9F6_9EURY/2-90  AC I6U9F6.1
#=GS G2M2A0_9EURY/1-85  AC G2M2A0.1
#=GS OGT_THEGJ/1-85     AC C5A3L5.1
#=GS OGT_THEBM/1-86     AC F0LIT8.1
#=GS OGT_THESM/1-86     AC C6A382.1
#=GS B6YXZ4_THEON/1-86  AC B6YXZ4.1
#=GS OGT_PYRAB/1-86     AC Q9V1N7.1
#=GS H3ZKP7_THELN/1-86  AC H3ZKP7.1
#=GS OGT_PYRFU/2-90     AC Q8TZV2.1
#=GS I3RGH3_9EURY/1-86  AC I3RGH3.1
#=GS F8AIH4_PYRYC/1-86  AC F8AIH4.1
#=GS OGT_PYRHO/1-86     AC O59499.2
#=GS W0I4H7_9EURY/1-86  AC W0I4H7.1
#=GS OGT_PYRSN/1-87     AC F4HK38.1
#=GS G0HLY8_THES4/1-85  AC G0HLY8.1
#=GS I3ZUS2_9EURY/1-85  AC I3ZUS2.1
#=GS OGT_THEKO/1-85     AC O74023.1
#=GS OGT_THEKO/1-85     DR PDB; 1MGT A; 1-85;
#=GS W8NW62_9EURY/1-85  AC W8NW62.1
I6U9F6_9EURY/2-90             ILEVRKFQVKNKAVYIGTLSEDK.IFGIIFSIDEPEVIRHRIPTLINFLEKR-LNKKLEIKEgnSGFSDVVFKTLIGKISNEEAAEfiE--vs
G2M2A0_9EURY/1-85             MLAVERFRVNGRDVWIGVIFHGR.IQGISFAFTRGELLE-RIRNLAGFLRRRNVAVSLDVQP..STYTELVYRVMVGELDNEKALS..ELS..
OGT_THEGJ/1-85                MLAVERFGVNGRDIWIGVIFHGR.IQGISFAFTRGELLE-RIRNLAEFLRGRDVRVSLDVQP..SNYTELVYRVLIGELENEKALP..ELS..
OGT_THEBM/1-86                MISIEKFEIFGREIWIAVFFEEK.IDGVTFSLDGCEYLMERINSLKALLERRNVSVNLAEEK..SDYPKIVYNVLVGDIENQDALR..FLS..
OGT_THESM/1-86                MISIKSFQIGEKEIVIAILFDKK.IQGITFSFDGEQFLQERVNALVEHLTNRGVKVNLEERD..SELPALVYKILIGEIRNQDGLE..YLS..
B6YXZ4_THEON/1-86             MLSVERFDIARKEVWIAVIFDEK.IQGITFSLDGEGFLRERIANMAFFLKKRGVNVELTLLE..SDYPRLVRDVILGKLENEELLP..EL-g.
OGT_PYRAB/1-86                MLSCESFKIKGREIIICVIWEEG.IQGIVYSLDGREFLEKQLSRLISMLNKRGVSLSLKERH..SKYPELVFNVLTGKISNEEGFE..ELS..
H3ZKP7_THELN/1-86             MIAIDSFKIGGREIQIAVIYEEK.IQGIAFSLDGEEFLRERIRGLVKHLQKRGVNVDLREKE..SDFPQLVYRVLLGEIKNEEALE..YLS..
OGT_PYRFU/2-90                ILEVRKFQVKNKAVYIGTLSEDK.IFGIIFSIDEPEVIRHRIPTLINFLEKR-LNKKLEIKEgnSGFSDVVFKTLIGKISNEEAAEfiE--vs
I3RGH3_9EURY/1-86             MLTIREFTVKAKKIYIGTIWDKR.ILGIAFSLDGRKFLEDRIQNLAEFLRKRGVRVKLNTKD..SEYPELVYQTLVGRIENHEMLD..KLS..
F8AIH4_PYRYC/1-86             MISIEAFSLANRKILIAVLWEEK.IEGITFSLDGKEFLKERITRLREFLLRRGASISLRLET..SNYPELVFKILVGEVENREALK..ELS..
OGT_PYRHO/1-86                MLTYKTFKILGREILIGVVWEEK.IQGIAYSLDGLEFLKDQLSRVTSHLKSRGVKVNLLEEK..SRYPDLVFDVLKGKIGNEKGFE..ELS..
W0I4H7_9EURY/1-86             MISIEKFEILGREIWIAVIFEQK.IDGLTFSLDGYEYLKERINSLKALLEHRKVLVNLVEEK..TDYPEIVYNALVGRIENEDALE..FLS..
OGT_PYRSN/1-87                MISYGRFNILGRELTIAIVWNNKgIQGITYSLDGIEFLEEQISRIINHLKSRNVRVNLSQEE..SEYPELVFMVLTGYVSNEEAFK..ELS..
G0HLY8_THES4/1-85             MLSVEKFRIANRDVWIAVLFEGG.VQGITFALDGEQFER-NLDRLTGFLRKRGVDVSIERER..SDYPALVRDVIIGRVSNSEILP..ELS..
I3ZUS2_9EURY/1-85             MLSVDVFEMAGRKVWIGVIHEKK.IQGITFALDGAQF-RANIERLSDFLERRGVDVDASDGE..SDYPSLVRDVIVGRLENEDLLL..ELS..
OGT_THEKO/1-85                MLSVEKFRVGERVVWIGVIFSGR.VQGIAFAFDRGTLMK-RIHDLAEHLGKRGVSISLDVQP..SDYPEKVFKVLIGELDNASFLR..ELS..
#=GR OGT_THEKO/1-85     SS    -EEEEEEEETTEEEEEEEEESSS.EEEEEEESSHHHHHH-HHHHHHHHHHHTT------B--..-SHHHHHHHHHTTSS-GGGGGG..GB-..
W8NW62_9EURY/1-85             MLAVERFRVSGRDVWIGVIFHGR.IQGISFAFTRGELLG-RIRNLAEFLRGRNVAVSLDVQP..SNYTELVYRVMVGELDNGKALS..ELS..
#=GC SS_cons                  -EEEEEEEETTEEEEEEEEESSS.EEEEEEESSHHHHHH-HHHHHHHHHHHTT------B--..-SHHHHHHHHHTTSS-GGGGGG..GB-..
#=GC seq_cons                 MLol-+FcltuR-laIuVla-cK.IQGIoFSLDGtEaLccRIssLspaLc+RsVsVsLc.cc..ScYP-LVacVLlGclcNE-uLc..ELS..
//
DBGET integrated database retrieval system