GenomeNet

Database: Pfam
Entry: DUF2606
LinkDB: DUF2606
Original site: DUF2606 
#=GF ID   DUF2606
#=GF AC   PF10794.7
#=GF DE   Protein of unknown function (DUF2606)
#=GF AU   Finn RD
#=GF SE   PRODOM
#=GF GA   25.00 25.00;
#=GF TC   25.10 25.90;
#=GF NC   24.80 24.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 17690987 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   16220534
#=GF RT   Proteomics-based consensus prediction of protein retention in a
#=GF RT   bacterial membrane.
#=GF RA   Tjalsma H, van Dijl JM;
#=GF RL   Proteomics. 2005;5:4472-4482.
#=GF DR   INTERPRO; IPR019730;
#=GF CC   Family of bacterial proteins with unknown function. These
#=GF CC   proteins have been classified as membrane proteins
#=GF SQ   4
#=GS A0A0A1MM71_9BACI/2-116  AC A0A0A1MM71.1
#=GS A0A0N1K0W8_THEVU/1-108  AC A0A0N1K0W8.1
#=GS YBFJ_BACSU/1-130        AC O31451.1
#=GS Q81HL4_BACCR/1-127      AC Q81HL4.1
A0A0A1MM71_9BACI/2-116             irllsc----------------LT.IFF--LVLFGCQQEESSNEA...NLQSGVVFIILNKDQSPVENFTITIVQT.--S--EPSPDIGVKPKPTDVNGRTEMELAEGETYEAALV..ISDyTTQYEEFTVSEDKKDNEFT---fil......
A0A0N1K0W8_THEVU/1-108             mrilag------------------.-ILACFILVGCA---HEESK..qPKLSPVTIRVLDQEGKPVSRVAVGITVViPEEEKERVGAIPVA-VYTNENGEIKDELVQGRKYILQLGskKKE.VVIT------------------dkpmivelt
YBFJ_BACSU/1-130                   ......MYSTIFNIGQINKYSKLA.IFMSILFLCGCSSQTHSSQK...ETTIPVTLHVEDAKGLPVEGVQVTIVKA.PSSDEEPSTEIGEILGKTDKNGDIKWDTGRKGDYSVALT..KGE.TSVTHHISLTEDKKDHAIPLVF.........
Q81HL4_BACCR/1-127                 ......MFLIILKNG-LNKYNKLLwILFCVLVIIVMTSYIVNNEKkfsKVVNSVTFHVKNKEKQPIKDFEIILMKD.ESP--EPSKEIGISIGKTDEEGKVIWRNVRTGKYIVFLP..NNE.T----QMVMINDRDATKKINIS.........
#=GC seq_cons                      ......................Lh.IhhshLlLhGCsp..psspK...phhssVTh+Vhsp-tpPVcshplsIsps..ps..EPSs-IGlt.shTDcNGclch-hscstcY.ltLs..psE.Ts.h.phsh.pD+cspth.............
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