GenomeNet

Database: Pfam
Entry: DUF2606
LinkDB: DUF2606
Original site: DUF2606 
#=GF ID   DUF2606
#=GF AC   PF10794.8
#=GF DE   Protein of unknown function (DUF2606)
#=GF AU   Finn RD
#=GF SE   PRODOM
#=GF GA   25.00 25.00;
#=GF TC   25.10 25.20;
#=GF NC   24.80 24.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 26740544 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   16220534
#=GF RT   Proteomics-based consensus prediction of protein retention in a
#=GF RT   bacterial membrane.
#=GF RA   Tjalsma H, van Dijl JM;
#=GF RL   Proteomics. 2005;5:4472-4482.
#=GF DR   INTERPRO; IPR019730;
#=GF CC   Family of bacterial proteins with unknown function. These
#=GF CC   proteins have been classified as membrane proteins
#=GF SQ   7
#=GS A0A0A1MM71_9BACI/2-116   AC A0A0A1MM71.1
#=GS A0A0N1K0W8_THEVU/1-108   AC A0A0N1K0W8.1
#=GS YBFJ_BACSU/1-130         AC O31451.1
#=GS A0A0K9GE43_9BACI/45-138  AC A0A0K9GE43.1
#=GS Q81HL4_BACCR/1-127       AC Q81HL4.1
#=GS A0A0M4FN83_9BACI/2-116   AC A0A0M4FN83.1
#=GS W7ZG60_9BACI/6-119       AC W7ZG60.1
A0A0A1MM71_9BACI/2-116              ....irllsc----------------LT.IFF--LVLFGCQQEE.SSNEA...NLQSGVVFIILNKDQSPVENFTITIVQT.--S--EPSPDIGVKPKPTDVNGRTEMELAEGETYEAALV..I..SDyTTQYEEFTVSEDKKDNEFT---fil..................
A0A0N1K0W8_THEVU/1-108              ....mrilag------------------.-ILACFILVGCA---.HEESK..qPKLSPVTIRVLDQEGKPVSRVAVGITVViPEEEKERVGAIPVA-VYTNENGEIKDELVQGRKYILQLGskK..KE.VVIT------------------dkpmivelt............
YBFJ_BACSU/1-130                    ..........MYSTIFNIGQINKYSKLA.IFMSILFLCGCSSQT.HSSQK...ETTIPVTLHVEDAKGLPVEGVQVTIVKA.PSSDEEPSTEIGEILGKTDKNGDIKWDTGRKGDYSVALT..K..GE.TSVTHHISLTEDKKDHAIPLVF.....................
A0A0K9GE43_9BACI/45-138             ysfgesasaa------------------.---------------.-----...DQEIPVTLSITDQDDAPIGNLEVIL-KS.ASN------GNASFPQKTNEKGIVQWT-ASQGLYTVEIY..M..NH.QVIKKKIVVIDHKKQPTI----qltl.................
Q81HL4_BACCR/1-127                  ..........MFLIILKNG-LNKYNKLLwILFCVLVIIVMTSYI.VNNEKkfsKVVNSVTFHVKNKEKQPIKDFEIILMKD.ESP--EPSKEIGISIGKTDEEGKVIWRNVRTGKYIVFLP..N..NE.T----QMVMINDRDATKKINIS.....................
A0A0M4FN83_9BACI/2-116              ..lkfisncl-----------------LfTLFFVL-ISACSSANnKEEEQ...PVMATVTINVSDKDNKPLKNIKVT----.--EDLHTSNDIGHEIGTTDKDGNIKWET-QTGKYDVILY..DvkAG.NDSEHTINITEDTT--------tihlvy...............
W7ZG60_9BACI/6-119                  ...vlgksfg------------------.LLFMLLLLSACS--L.VDDEP...RNIKDVTFLIVDQHNKPVANRWIGI-DN.DSTD--EGREIGTYLGETDENGIIERYSNEVREYQIAYY..Q..GS.F---------------------vlteedegaritvvitieedq
#=GC seq_cons                       .........h...................hhh.hLhl.uCs....hpppt...phhtsVThplhDp-spPlpshplsl.ps..ps..c.ut-IGhh.spTDcsGplchc.spstcYpltLh..p..sc.ss...phsh.pcpp.........h...................
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