GenomeNet

Database: Pfam
Entry: DUF3008
LinkDB: DUF3008
Original site: DUF3008 
#=GF ID   DUF3008
#=GF AC   PF11450.5
#=GF DE   Protein of unknwon function (DUF3008)
#=GF AU   Gunasekaran P, Mistry J
#=GF SE   Pfam-B_3521 (release 23.0)
#=GF GA   21.50 21.50;
#=GF TC   21.50 58.60;
#=GF NC   20.80 19.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR021553;
#=GF CC   This is a bacterial family of uncharacterised proteins.
#=GF SQ   55
#=GS A0A0A7PDD4_9SPHN/3-59  AC A0A0A7PDD4.1
#=GS A6X6Z0_OCHA4/3-59      AC A6X6Z0.1
#=GS D6ZZQ4_STAND/3-59      AC D6ZZQ4.1
#=GS I3TSU6_TISMK/3-59      AC I3TSU6.1
#=GS C3KLN8_RHISN/3-59      AC C3KLN8.1
#=GS A0A085BRS0_9RHOB/3-59  AC A0A085BRS0.1
#=GS A0A052IJT9_9BORD/3-59  AC A0A052IJT9.1
#=GS Q2YNH4_BRUA2/3-59      AC Q2YNH4.1
#=GS A0A0A8JXU7_9RHIZ/3-59  AC A0A0A8JXU7.1
#=GS A9I9J1_BORPD/3-59      AC A9I9J1.1
#=GS Q2G7N5_NOVAD/3-59      AC Q2G7N5.1
#=GS Q7VWQ3_BORPE/3-59      AC Q7VWQ3.1
#=GS Q1QZE5_CHRSD/3-59      AC Q1QZE5.1
#=GS Q2RUP2_RHORT/3-59      AC Q2RUP2.1
#=GS Q63I53_BURPS/3-59      AC Q63I53.1
#=GS I3U9C4_ADVKW/3-59      AC I3U9C4.1
#=GS G8AW90_AZOBR/4-60      AC G8AW90.1
#=GS C6XMQ6_HIRBI/3-59      AC C6XMQ6.1
#=GS E8TFE2_MESCW/3-59      AC E8TFE2.1
#=GS A6X1K9_OCHA4/3-59      AC A6X1K9.1
#=GS F2LJB2_BURGS/3-59      AC F2LJB2.1
#=GS I3U767_ADVKW/3-59      AC I3U767.1
#=GS A0A0B5E6C8_9RHOB/8-59  AC A0A0B5E6C8.1
#=GS F4GQU6_PUSST/3-59      AC F4GQU6.1
#=GS Q3IZA5_RHOS4/3-59      AC Q3IZA5.1
#=GS Q11I53_CHESB/31-87     AC Q11I53.1
#=GS A0A0D5LU38_9RHIZ/3-59  AC A0A0D5LU38.1
#=GS A8HRS1_AZOC5/3-59      AC A8HRS1.1
#=GS Q1GY36_METFK/3-59      AC Q1GY36.1
#=GS A0A0B4XY28_9PROT/3-59  AC A0A0B4XY28.1
#=GS A0A0A8K0V1_9RHIZ/3-59  AC A0A0A8K0V1.1
#=GS Q98NP7_RHILO/3-59      AC Q98NP7.1
#=GS D9QKP5_BRESC/3-59      AC D9QKP5.1
#=GS A7IL39_XANP2/3-59      AC A7IL39.1
#=GS A1B2J2_PARDP/3-59      AC A1B2J2.1
#=GS A4JQW4_BURVG/3-59      AC A4JQW4.1
#=GS U1ZN03_9BURK/3-61      AC U1ZN03.1
#=GS C5AKT3_BURGB/3-59      AC C5AKT3.1
#=GS A0A0B4X771_9RHIZ/3-59  AC A0A0B4X771.1
#=GS A7HQ58_PARL1/3-59      AC A7HQ58.1
#=GS Q0C4R3_HYPNA/3-59      AC Q0C4R3.1
#=GS A0A060B2P6_9GAMM/3-59  AC A0A060B2P6.1
#=GS W0A299_9SPHN/3-59      AC W0A299.1
#=GS E3F4U6_KETVY/3-59      AC E3F4U6.1
#=GS V9VN91_9RHOB/3-59      AC V9VN91.1
#=GS X4ZJA1_9BORD/3-59      AC X4ZJA1.1
#=GS G4RA92_PELHB/3-59      AC G4RA92.1
#=GS A0A0A7PAW0_9SPHN/3-59  AC A0A0A7PAW0.1
#=GS Q2N8G8_ERYLH/4-60      AC Q2N8G8.1
#=GS A0A0B5E7L1_9RHOB/3-59  AC A0A0B5E7L1.1
#=GS A0A068SRW5_RHIGA/3-59  AC A0A068SRW5.1
#=GS B4RGJ9_PHEZH/3-59      AC B4RGJ9.1
#=GS W6S878_9RHIZ/3-59      AC W6S878.1
#=GS W8X696_CASDE/3-59      AC W8X696.1
#=GS Q0JYQ6_CUPNH/3-59      AC Q0JYQ6.1
A0A0A7PDD4_9SPHN/3-59             ...AKSKAQQKAAGAALSAKRGDTPKSKLKGASKQMADGMSEKQLEDFAKGS..TKGKPEH-a....
A6X6Z0_OCHA4/3-59                 ...AKSKAQQQAAGAALAAKRGDKSKSQLRGASREMAKSMSEKELEKLASTR..QKDKPEHK.....
D6ZZQ4_STAND/3-59                 ...AKSKAQQKAAGAALSAKRGETKKSELRGASKSMEKSMSEKQLEEFASTK..RKGKPEHV.....
I3TSU6_TISMK/3-59                 ...AKSKAQQKAAGAALSAKRGETKMSDLQGASKSMVKSMSEKELHDMAATR..RKGKPEH-a....
C3KLN8_RHISN/3-59                 ...AKSKAQQKAAGAALAAKRGDMKKSELKGASKGMAESMSEKELEEMASTK..RKGKKEHV.....
A0A085BRS0_9RHOB/3-59             ...AQSKAQQRAAGAALSAKRGETKVKDLQGASKDMYDSMSEDELEEMASTD..HDGLPDE-v....
A0A052IJT9_9BORD/3-59             ...AKSKAQQMAAGAALAAKRHETPVGSLKGASRQMYDSMTEKQLEEFAHTK..RRGKPRH-a....
Q2YNH4_BRUA2/3-59                 ...AKSQAQQKAAGAALAAKRGEIKVSELFGASKQMYESMTEKELEELAETK..RKGLPGHV.....
A0A0A8JXU7_9RHIZ/3-59             ...ATSKAQQKAAGAALAAKRGEQKVSELKGASKSMYDSMSEKELEDMASTP..RHGKPEHK.....
A9I9J1_BORPD/3-59                 ...AKSQAQQKAAGAALAAKRGEQKKSSLKGASKSMYESMDKKELEKMASTS..RHGKPQHK.....
Q2G7N5_NOVAD/3-59                 ...AKSAAQQKAAGAALSAKRGDTPKSKLQGASRSMEKSMTEKELEELASTS..RKGKPEHK.....
Q7VWQ3_BORPE/3-59                 ...AKSKAQQMAAGAALAAKRGESRVSDLKGASRDMYDSMSERELEHMAGTA..RKGKPYHK.....
Q1QZE5_CHRSD/3-59                 ...AKSQAQQMAAGAALAARRGEQKASDLDGAAKSMYDSMSEEELEAMASTS..QKGKPEH-d....
Q2RUP2_RHORT/3-59                 ...AKSKAQQKAAGAALSAKRGKTKKSALKGASKEMVESMSESELRKLASTK..LKGKPDHV.....
Q63I53_BURPS/3-59                 ...AKSQAQQRAAGAALSAKRGRTKASELKRPSKSMYSSMSEKELEKLAGTK..TRDKPKHK.....
I3U9C4_ADVKW/3-59                 ...AKSQDQQQAAGAALAAKRGETKVSSLKGASKSMYDSMSEKELEELASTP..RKGKPEHV.....
G8AW90_AZOBR/4-60                 ...AESKKQQMAAGAALAAKRGEQPESSLRGASKEMAKSMSEKELREMASAK..RKDLPAR-s....
C6XMQ6_HIRBI/3-59                 ...AQSKAQQRAAGAALSAKRGDTKVDDLEGASKDMYESMSEDELEEIASTS..HDNLPEKV.....
E8TFE2_MESCW/3-59                 ...ATSKAQQKAAGAALSAKRGETKKSELQGASKGMYESMSEKQLEEFAETK..RKGLPEKK.....
A6X1K9_OCHA4/3-59                 ...AKSQAQQKAAGAALAAKRGEIKKSELFGASKEMYESMTEKELEEFAEIK..RKGLPEHV.....
F2LJB2_BURGS/3-59                 ...AKSQAQQRAAGAALAAKRGETKKSSLKPASKSMYESMNKKQLEDFASTK..TRGKPHHK.....
I3U767_ADVKW/3-59                 ...AKSKSQQQAAGAALSAKEGEKKVGDLKGASKSMYKSMSKKELKEMASTS..RSDKPKHK.....
A0A0B5E6C8_9RHOB/8-59             lkr--------DAGTALAAKRGEVREGDLRGASRNMYETLTENELAEMAGVD..LRD-----vsars
F4GQU6_PUSST/3-59                 ...AKSKSQQQAAGIALAAKEGDKKVSELKGPAKSMYESMSKKELHDLAATK..TKHKPEHK.....
Q3IZA5_RHOS4/3-59                 ...ATSKAQQKAAGAALSAKRGDTKKSDLKGASRSMEDSMSEKELKEMAATE..RKGKPEHK.....
Q11I53_CHESB/31-87                ...AKSKAQQKAAGAALSAKRGETPKSKLKGPSKSMEESMSEKQLEELAHTK..RKKLPNKK.....
A0A0D5LU38_9RHIZ/3-59             ...AQSKSQQKAAGAALAAKRGEQKKSDLKGPARQMEKSMSEKELDDMASGK..RKRKPDHK.....
A8HRS1_AZOC5/3-59                 ...AKSKAQQMAAGAALAAKRDHSKAQELKGASKSMYKSMDKKELHDLAATP..RKGKPRH-a....
Q1GY36_METFK/3-59                 ...AKSKAQQMAAGAALAAKRGEASKKDLKGASRSMVESMSEQELEKLASTK..HKGKPYK-v....
A0A0B4XY28_9PROT/3-59             ...AKSKSQQKAAGLALSVKRGEQKKSELTGAAREMAESMSEEELEELASGQ..RKGKPEHK.....
A0A0A8K0V1_9RHIZ/3-59             ...ATSKAQQNAAGAALAAKRGEQKVSSLKGASKSMYDSMSEKELEEMASTP..RRGKPQH-a....
Q98NP7_RHILO/3-59                 ...ATSKAQQKAAGAALSAKRGETKKSELKGASKGMYESMSEKQLEEFAETK..RKGLPEKK.....
D9QKP5_BRESC/3-59                 ...ARSAAQQKAAGAALSAKRGDTLKSDLKGASRQMVESMSETQLEDFARTT..RKGKPAHV.....
A7IL39_XANP2/3-59                 ...AKSKAQQMAAGAALAAKRGERKTSELKGASREMVETMTEKELSELASTR..RKGKPDHV.....
A1B2J2_PARDP/3-59                 ...AKSKAQQKAAGAALAAKRGETRKGDLREPSKQMYESMSEKELEELAGTR..HKGKPEHK.....
A4JQW4_BURVG/3-59                 ...AKSQAQQRAAGAALSAKRGDTKMKDLKPPSKSMAKSMSEKELEKMASTP..THGKPKHK.....
U1ZN03_9BURK/3-61                 ...ALSQAQQKAAGAALSAKRGETPVASLKGASLEMYNTMSTKELEELASTDtaRRNLPEHK.....
C5AKT3_BURGB/3-59                 ...AKSQSQQRAAGAALAAKRGQTKVRSLKPASKSMYDSMSEKQLEDFAHTK..VRGKPRHK.....
A0A0B4X771_9RHIZ/3-59             ...AKSKAQQKAAGAALSAKRGETPKSELKGASKQMVKSMSEKQLEEFAATK..TKGKPEH-a....
A7HQ58_PARL1/3-59                 ...AKSKAQQKAAGAALAAKRGDIKKSELKGASKSMVNSMSEKELHDMASTK..RKGKPAKK.....
Q0C4R3_HYPNA/3-59                 ...AQSEAQQKAAGAALSAKRGDTPKSKLKGASVEMYESMSEKELEEMASTK..HDKIPERK.....
A0A060B2P6_9GAMM/3-59             ...ATSKAQQKAAGAALSAKRGETKPSELYDSSKDMYDSMSEEELEEMASTQ..RKGKPQK-r....
W0A299_9SPHN/3-59                 ...AKSAAQQKAAGAALSAKRGDTPKSKLKGASREMEKSMSEQQLEEFAETK..RKGKPEHV.....
E3F4U6_KETVY/3-59                 ...AKSKAQQKAAGAALSAKRGETAVKDLVGASKEMYDTMTEAELDELASTP..HDGLPDKV.....
V9VN91_9RHOB/3-59                 ...AKSKAQQRAAGAALAAKRGETSKSDLYGAAREMYDTMTEEELEDYAATD..HDGLPEKK.....
X4ZJA1_9BORD/3-59                 ...AKSKAQQMAAGAALAAKRHEAPVGSLKGASRQMYDTMTQKQLEEFAHTK..QRGKPRH-t....
G4RA92_PELHB/3-59                 ...AKSKAQQKAAGAALAAKRGEIPKKELKGASRDMVDSMTEKELEEFASTK..RKDLPNKK.....
A0A0A7PAW0_9SPHN/3-59             ...ATSKAQQKAAGAALAAKRGEAPKFKLKGASKQMEKSMSEDQLEEFASTK..RKGLPDKK.....
Q2N8G8_ERYLH/4-60                 ...AKSKAQQQAAGAALAAKRGEQDKSDLQGASKQMYESMSEDELEEMASTD..RENLPDT-v....
A0A0B5E7L1_9RHOB/3-59             ...AKSKAQQKAAGAALSAKRGDTRKGDLQGASKGMYDSMSEDELEDLASTK..RKGKPEHV.....
A0A068SRW5_RHIGA/3-59             ...AKSKAQQKAAGAALAAKRGDMKKSELKGASKDMEKSMSEKQLEDFASTK..RKGKPDH-a....
B4RGJ9_PHEZH/3-59                 ...AKSAAQQKAAGAALSAKRGDTPKSKLKGASKSMADSMSEKELEKMASTK..RKGKPEHV.....
W6S878_9RHIZ/3-59                 ...AKSKAQQKAAGAALAAKRGQTPKSRLKGASKEMVDSMSEKQLEEFASTK..RRGKPER-v....
W8X696_CASDE/3-59                 ...AQSKSQQQAAGIALAAKHGDKKVSELKGASRSMYESMDEKELRELAKTK..TRDKPEHK.....
Q0JYQ6_CUPNH/3-59                 ...AKSKAQQQAAGAALSAKRGEKKAGSLKGPSRSMYKSMSEKELDKMASTK..TKGMPKHK.....
#=GC seq_cons                     ...AKSKAQQ+AAGAALuAKRGEs+pS-LKGASKsMh-SMSEKELE-hAST+..RKGKP-Hh.....
//
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