GenomeNet

Database: Pfam
Entry: DUF3199
LinkDB: DUF3199
Original site: DUF3199 
#=GF ID   DUF3199
#=GF AC   PF11436.3
#=GF DE   Protein of unknown function (DUF3199)
#=GF AU   Pollington J, Finn RD
#=GF SE   pdb_1xn8
#=GF GA   25.00 25.00;
#=GF TC   25.40 27.60;
#=GF NC   24.60 24.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR013514;
#=GF CC   Some members in this family of proteins with unknown function
#=GF CC   are annotated as YqbG however this cannot be confirmed.
#=GF CC   Currently the proteins has no known function.
#=GF SQ   44
#=GS Q65L28_BACLD/3-124  AC Q65L28.1
#=GS I0F360_9BACI/1-125  AC I0F360.1
#=GS G4L6L9_TETHN/1-108  AC G4L6L9.1
#=GS Q62WH4_BACLD/1-122  AC Q62WH4.1
#=GS B3ZWM5_BACCE/2-127  AC B3ZWM5.1
#=GS I0UEG2_BACLI/1-122  AC I0UEG2.1
#=GS YKZL_BACSU/1-125    AC C0H3Z6.1
#=GS G4NS00_BACPN/1-125  AC G4NS00.1
#=GS I0U4Q9_BACTR/1-123  AC I0U4Q9.1
#=GS C3FD56_BACTU/2-124  AC C3FD56.1
#=GS A8FGQ5_BACP2/1-125  AC A8FGQ5.1
#=GS C2YJ93_BACCE/1-109  AC C2YJ93.1
#=GS E8VED1_BACST/2-129  AC E8VED1.1
#=GS F4ERD2_BACAM/1-125  AC F4ERD2.1
#=GS B3Z213_BACCE/2-127  AC B3Z213.1
#=GS D5MYK2_BACPN/1-125  AC D5MYK2.1
#=GS E0U1S3_BACPZ/1-125  AC E0U1S3.1
#=GS F4E6D0_BACAM/1-125  AC F4E6D0.1
#=GS H0FJS3_BACAM/1-125  AC H0FJS3.1
#=GS C2VKW7_BACCE/2-127  AC C2VKW7.1
#=GS A5ZPY6_9FIRM/6-127  AC A5ZPY6.1
#=GS E5W4K8_9BACI/1-122  AC E5W4K8.1
#=GS C2NSF8_BACCE/2-127  AC C2NSF8.1
#=GS G4NT58_BACPN/1-128  AC G4NT58.1
#=GS E3E567_PAEPS/1-121  AC E3E567.1
#=GS B4AH48_BACPU/1-128  AC B4AH48.1
#=GS C3GSS1_BACTU/2-127  AC C3GSS1.1
#=GS C2PP49_BACCE/2-128  AC C2PP49.1
#=GS E8VIA0_BACST/1-125  AC E8VIA0.1
#=GS H1I7M3_9BACI/2-133  AC H1I7M3.1
#=GS G4ETF8_BACIU/1-105  AC G4ETF8.1
#=GS G0IE12_BACAM/1-125  AC G0IE12.1
#=GS YQBG_BACSU/2-129    AC P45923.2
#=GS YQBG_BACSU/2-129    DR PDB; 1XN8 A; 2-129;
#=GS YQBG_BACSU/2-129    DR PDB; 1ZTS A; 2-129;
#=GS C2TQU0_BACCE/2-124  AC C2TQU0.1
#=GS A0RLX2_BACAH/5-130  AC A0RLX2.1
#=GS D4FVH5_BACNA/1-125  AC D4FVH5.1
#=GS B4AHK0_BACPU/1-125  AC B4AHK0.1
#=GS Q92CB6_LISIN/2-130  AC Q92CB6.1
#=GS H2AHK3_BACAM/1-125  AC H2AHK3.1
#=GS G4P2J5_BACIU/1-125  AC G4P2J5.1
#=GS G8UHF6_BACCE/2-127  AC G8UHF6.1
#=GS G4EXG2_BACIU/1-125  AC G4EXG2.1
#=GS E3DWZ6_BACA1/1-125  AC E3DWZ6.1
#=GS C3GC79_BACTU/2-128  AC C3GC79.1
Q65L28_BACLD/3-124             ..MLITPDDIIQYSVI.EAVKNRPQELLRQDILEAEAEAEQITGH.RFTDEKYDP......LPEKARLALLQLAQYFALK.NG...D....E...SLLKGYKSEKL..GDYSYTLSRSG..GLVKPDVYKLLEEFI....--LDYESVRFKVR............
I0F360_9BACI/1-125             ..MLIEPTDVASYSVY.DQVKNRPEELLAQDIIEAEAEAALITGH.CFEDSVYDP......LPDKAKLALLKLAQYFALV.NS...D....E...SASSSYQSEKM..GDYSYTVSGEG..GIQRPEVYHLLEEFI...tPGYVPESSRLKVR............
G4L6L9_TETHN/1-108             ..MFIDRDEIISHSNYgDELGKLDDEQLKEYENRADSYITVVTNK.DYSNTDSKI......IQQALRTATWRLVDYLFYFdNE...DvedkE...KRYAGVKSENI..GDYSYTKQDQT..S--------------....-------------ddigl.......
Q62WH4_BACLD/1-122             ..MLITPDDIIQYSVI.EAVKNRPQELLRQDILEAEAEAEQITGH.RFTDEKYDP......LPEKARLALLQLAQYFALK.NG...D....E...SLLKGYKSEKL..GDYSYTLSRSG..GLVKPDVYKLLEEFI....--LDYESVRFKVR............
B3ZWM5_BACCE/2-127             ..PLITAQEVIDYTVL.PEVKKRPVPLLEQDILEADTEIYNLSKI.DFSDKTKYP.....eVPAEVKLACKKLAQYYAYT.NA...D....T...TAMKGIKSESIgsGDYSYT-KDSS..SIIKPSVLYLLQKFM....DHKGKNKITFKMR............
I0UEG2_BACLI/1-122             ..MLITPDDIIQYSVI.EAVKNRPQELLRQDILEAEAEAEQITGH.RFTDEKYDP......LPEKARLALLQLAQYFALK.NG...D....E...SLLKGYKSEKL..GDYSYTLSRSG..GLVKPDVYKLLEEFI....--LDYESVRFKVR............
YKZL_BACSU/1-125               ..MLIEPTDVASYSVY.DRVKNRPEELLAQDIIEAEAEAALITGH.RFEDSLYDP......LPGKVKLALVKLAQYFALV.NS...D....E...SASSSYQYEKM..GDYSYTVSGEG..RIQRPEVYHLLEEFI...kPGYVPESSRLKVR............
G4NS00_BACPN/1-125             ..MLIEPSDVASYSVY.ARVKNRPEELLAQDIIEAEAEAALITGH.CFEDSVYDP......LPNKAKLALLKLAQYFALV.NS...D....E...SASSSYQSEKM..GDYSYTISGED..GIQRPEVYHLLEEFI...iPGYVPESSRLKVR............
I0U4Q9_BACTR/1-123             ..MLITPADLKAYSVF.DIVKERPDSLLEQDIIEAEVEIESIVGH.DFSEYD--P......LPEKAKLALLKMAQFFALV.NS...D....E...SIVKGYKSEKI..GDYSYTLGDGS..VLRKPDVYGLLKEYI...iESSTNESIKFRMR............
C3FD56_BACTU/2-124             .a-IISPERLIDYTIF.DEVKQRDPKLLQMDIVEAQNDIFSLTFV.DFQDKSEYP.....tVPEEVEIACCKLAQYHALV.NS...D....E...ASVEDVQSQRM..GNYSE---QTN..GYIKPDVRSLLFKWI...kDKKQQGTVALRLR............
A8FGQ5_BACP2/1-125             ..MMISPEELQAYSVF.ERVKNRSVERLTADIIEAEAAVFQIVGH.DFSSEKYQP......LPEKARIALLKMAQYFAML.ND...D....E...SMMKGFTSEKM..GDYSYAKAADQ..VKGKPYVYALLVDYI...ePSLTRGSTKLKVR............
C2YJ93_BACCE/1-109             ..MYASPADVKERTSF.LEVSSLYNEKIQLYIDRAASWIHREVQR.TFENETNKQ......TLSDLLTATVLLVEYLWYQ.DHpemK....E...AQLSAASSEKI..GNYSYTLRDA-..---------------....-------------lggntademkf.
E8VED1_BACST/2-129             .l-LITPDELKSYSVF.ESVKTRPDELLKQDILEATADIILKVGH.DFTDAEYIP......LPETVRLALLKLSQFYALI.NG...D....E...SIIKGYTTEKI..GDYSYTLGDGS..SLQKPDVYALIKDYVkpadPDLEGIEAKVRMR............
F4ERD2_BACAM/1-125             ..MLIQPSDVVSYSVY.DQVKNRPEQLLIQDILEAEAEAARLAGH.PFTDPVYSP......LPEKIKLALLKLSQYFALI.NQ...N....E...AAASAYQSEKI..GDYSYTVAGEG..GIRKPAVYHLLCEYI...aPG-----------ctpasasakvr.
B3Z213_BACCE/2-127             .a-LITAQELIDYTVL.PEVKKRPVPLLEQDILEADTEIYNLSKI.DFSNKTKYP.....eVPAEVKLACKKLAQYYAST.NS...D....T...NAMKGIKSESIggGDYSYT-KDTG..SITKPSVLYLLQKFM....NHKEKNKVTFKM-g...........
D5MYK2_BACPN/1-125             ..MLIEPTDVASYSVY.DRVKNRPEELLAQDIIEAEAEAALITGH.CFEDSVYDP......LPDKAKLALLKLAQYFALV.NS...D....E...SASSSYQSEKM..GDYSYTVSGEG..GIQRPEVYHLLEEFI...iPGYVPESSRLKVR............
E0U1S3_BACPZ/1-125             ..MLIEPTDVASYSVY.DRVKNRPEELLAQDIIEAEAEAALITGH.CFEDSVYDP......LPDKAKLALLKLAQYFALV.NS...D....E...SASSSYQSEKM..GDYSYTVSGEG..GIQRPEVYHLLEEFI...iPGYVPESSRLKVR............
F4E6D0_BACAM/1-125             ..MLIQPSDVVSYSVY.DQVKNRPEQLLIQDILEAEAEAARLAGH.PFTDPVYSP......LPEKIKLALLKLSQYFALI.NQ...N....E...AAASAYQSEKI..GDYSYTVAGEG..GIRKPAVYHLLCEYI...aPG-----------ctpasasakvr.
H0FJS3_BACAM/1-125             ..MLIQPSDVVSYSVY.DQVKNRPEPLLIQDILEAEAEAARMAGH.SFTDPVYSP......LPEKIKIALLKLSQYFALI.NQ...N....E...AAASAYQSEKI..GDYSYTVAGEG..GIRKPAVHHLLCEYI...tP------------gyspvsahakvr
C2VKW7_BACCE/2-127             .a-LITAQELIDYTVL.PEVKKRPVPLLEQDILEADTEIYNLSKI.DFGDKTKYP.....eVPAEVKLACKKLAQYYAYT.NA...D....T...NAMKGIKSESIggGDYSYT-MDSS..SIAKPSVLYLLQKFM....DHKGKNKVTFKMR............
A5ZPY6_9FIRM/6-127             ..PWVLPNDVKSYTSH.KEVSERSDEKLTFDIARAEMKIIHITNN.KFAEYDE--......IPEPVRMAVILVAEAYA-K.ND...I....E...SAKKKIKSETF..DDYSYTVEAGT.iSLDSLDLEELLADYI....ITDGIGKTVMRLR............
E5W4K8_9BACI/1-122             ..MLITPDDIIQYSVI.EAVKNRPQELLRQDILEAEAEAEQITGH.RFTDEKYDP......LPEKARLALLQLAQYFALK.NG...D....E...SLLKGYKSEKL..GDYSYTLSRSG..GLVKPDVYKLLEEFI....--LDYESVRFKVR............
C2NSF8_BACCE/2-127             ..PLITAQELIDYTVL.PEVKKRPVPLLEQDILEAETEIYNLSKI.DFTDKTKYP.....eVPAEVKLACKKLAQYYAYT.NA...D....T...TAMKGIKSESIgsGDYSYT-KDSS..SITKPSVLYLLQKFM....NHKGKNKVTFKMR............
G4NT58_BACPN/1-128             ..MLITPADLKNYTVF.DSVKDRSDSLLTQDIIEGIAEITYQVGH.DFSGPEYDP......LPETVRLALLKMAQYFALI.NS...D....E...SITKGYTTEKI..GDYSYSLGNGS..SIQKPDVYTLIKDYVvssePSLEGTEVKMRMR............
E3E567_PAEPS/1-121             ..-MLTPTILQQRSRV.TPIQEAPAELLQQYIDDAQVRIELYLPI.PFPAEPD--......--KQIMLAWTKLAEGLALQ.DS...E....EylaSVARNYASESD..GAWTYTRQAVEgkTTGNPDVDAILFLWV....KKQ----------tgpddgn.....
B4AH48_BACPU/1-128             ..MLISPEDVRAYTVF.ESVKNRSEELLTSDIIEAEAAVFQIVGH.DFTAEKYQL......LPEKAKIALIKMAQFFALI.NG...D....E...SIIKGYKSEKI..GDYSYTLADGN..AVSKPDVYNLLIDFIepgePPEDPGSVKLRLR............
C3GSS1_BACTU/2-127             ..PLITAQELIDYTVL.PEVKKRSVPLLEQDILEADTEIYNLSKI.DFSDKTKYP.....eVPEEVKLACKKLAQYYASI.NS...D....T...NAMKGIKSESIggGDYSYT-KDSA..SVTKPSVLYLLQKFM....NHKEKNKVTFKMR............
C2PP49_BACCE/2-128             ..PLITAQELIDYTVL.PEVKKRPVPLLEQDILEAETEINNIPNIaNFADKTKFP.....vIPEVVKLACKKLAQYYAYT.NA...D....T...TTMKGIKSESVggGDYSYT-KDSS..SIIKPEVLNLLKGFI....PNAGKKKVTFKMR............
E8VIA0_BACST/1-125             ..MLIEPTDVASYSVY.DRVKNRPEELLAQDIIEAEAEAALITGH.RFEDSLYDP......LPGKVKLALVKLAQYFALV.NS...D....E...SASSSYQSEKM..GDYSYTVSGEG..GIQRPEVYHLLEEFI...kPGYVPESSKLKVR............
H1I7M3_9BACI/2-133             pr--ITAADVIGYTVF.DKVKQRPPTLLEMDIIEADQEIKSIVGH.TFNGVDTEGnplypaLPPEVEIAYLKMAQFFALI.NS...D....E...SITKGYQSERI..GDYSYTLANGQ..TVRKPDVFDLLSAYIq..eKEKTTGNTRMKMR............
G4ETF8_BACIU/1-105             .m--------------.----------LKQDILEATADIILKVGH.DFSDAEYIP......LPETVRLALLKLSQFYALI.NG...D....E...SIIKGYTTEKI..GDYSYTLGDGS..SLQKPDVYALIKDYVkpadPDLEGIEAKVRMR............
G0IE12_BACAM/1-125             ..MLIQPSDVVSYSVY.DQVKNRPEQLLIQDILEAEAEAARLAGH.PFTDPVYSP......LPEKIKLALLKLSQYFALI.NQ...N....E...AAASAYQSEKI..GDYSYTVAGEG..GIRKPAVYHLLCEYI...aPG-----------ctpasasakvr.
YQBG_BACSU/2-129               .l-LITPDELKSYSVF.ESVKTRPDELLKQDILEATADIILKVGH.DFSDAEYIP......LPETVRLALLKLSQFYALI.NG...D....E...SIIKGYTTEKI..GDYSYTLGDGS..SLQKPDVYALIKDYVkpadPDLEGIEAKVRMR............
#=GR YQBG_BACSU/2-129    SS    .-----HHHHHHH---.HHHHHS-HHHHHHHHHHHHHHHHHHHT-.----CCG--......--HHHHHHHHHHHHHHHHT.TS...S....S...S-B-STTSSS-..SSS--B-TTS-..B------HHHHCCCSS-S--TTSS-SSHHHHH............
C2TQU0_BACCE/2-124             .a-IISPERLIDYTIF.DEVKQRDPKLLQMDIVEAQNDIFSLTFV.DFQDKSKYP.....tVPEEVEIACCKLAQYHALV.NS...D....E...ASVEDVQSQRM..GNYSE---QTN..GYIKPDVRSLLFKWI...kDKKQHGTVALRLR............
A0RLX2_BACAH/5-130             ..PLITAQELIDYTVL.PEVKNRPVPLLEQDILEADTEIYNLSKI.DFSDKTKYP.....eVPEEVKLACKKLAQYYAYT.NA...D....T...TAMKGIKSESIgsGDYSYT-KDSS..SIVKPSVLYLLQKFM....DHKGKNKVIFKMR............
D4FVH5_BACNA/1-125             ..MLIEPTDVASYSVY.DRVKNRPEELLAQDIIEAEAEAALITGH.RFEDSLYDP......LPGKVKLALVKLAQYFALV.NS...D....E...SASSSYQSEKM..GDYSYTVSGEG..GIQRPEVYHLLEEFI...tPGYAPESSRLKVR............
B4AHK0_BACPU/1-125             ..MIISPEELQAYSVF.ERVKNRSVERLTADIIEAEAAVFQIVGH.DFSSGKYQP......LPEKARIALLKMAQYFAML.ND...D....E...SMMKGFTSEKM..GDYSYAKAADQ..VKGKPYVYALLVDYI...ePSFTGGSTKLKVR............
Q92CB6_LISIN/2-130             .s-YITPEELITYSDF.EAVRERKPEKLKMDILEAEMDLQAALGK.SLVDIKSRSve.etgFPETLKLALLRLAQFRALY.NT...S....E...SMQKGYSAEKI..ADYSYSLANGE..SINYPDVSNLIADYL....DQKSTDKRKFRFR............
H2AHK3_BACAM/1-125             ..MLIQPSDVVSYSVY.DQVKNRPEPLLIQDILEAEAEAARMAGH.SFTDPVYSP......LPEKIKLALLKLSQYFALI.NQ...N....E...AAASAYQSEKI..GDYSYTVAGEG..GIRKPAVHHLLCEYI...aP------------gyspvsahakvr
G4P2J5_BACIU/1-125             ..MLIEPTDVASYSVY.DRVKNRPEELLAQDIIEAEAEAALITGH.RFEDSLYDP......LPGKVKLALVKLAQYFALV.NS...D....E...SASSNYQSEKM..GDYSYTVSGEG..GIQRPEVYHLLEEFI...kPGYVPESSRLKVR............
G8UHF6_BACCE/2-127             ..PLITAQEVIDYTVL.PEVKKRPVPLLEQDILEADTEIYNLSKI.DFSDKTKYP.....eVPAEVKLACKKLAQYYAYT.NA...D....A...TAMKGIKSESIgsGDYSYT-KDSS..SIIKPSVLYLLQKFM....DHKGKNKITFKMR............
G4EXG2_BACIU/1-125             ..MLIEPTDVASYSVY.DRVKNRPEELLAQDIIEAEAEAALITGH.RFEDSLYDP......LPGKVKLALVKLAQYFALV.NS...D....E...SASSSYQSEKM..GDYSYTVSGEG..GIQRPEVYHLLEEFI...kPGYVPESSKLKVR............
E3DWZ6_BACA1/1-125             ..MLIEPTDVASYSVF.EQVHNRPEHLLTQDIIEAEAEAARITGH.HFTDAVYVP......LPDKARLALLKLAQYFALV.NS...D....E...TSVSSYQSEKM..GDYSYTISTNG..GIQKPDVYNLLQEYI...aAGYSPASSKLKVR............
C3GC79_BACTU/2-128             .a-LITAQELIDYTVL.PEVKKRPVPLLEQDILEAETEINNIPNIaNFADKTEFP.....vIPEVVKLACKKLAQYYAYI.NA...D....T...TAMKGIKSESVggGDYSYT-KDSS..SIAKPDVLNLLKGFI....PNAGKKKVTFKMR............
#=GC SS_cons                   .-----HHHHHHH---.HHHHHS-HHHHHHHHHHHHHHHHHHHT-.----CCG--......--HHHHHHHHHHHHHHHHT.TS...S....S...S-B-STTSSS-..SSS--B-TTS-..B------HHHHCCCSS-S--TTSS-SSHHHHH............
#=GC seq_cons                  ...LIsPs-lhsYSVa.-pVKsRPppLLpQDIlEAEuEhtplsGH.cFsDpsh.P......LP-cl+LALlKLAQYaALl.Nu...D....E...oshcuYpSEKl..GDYSYTlussu..ulpKP-VapLLp-aI....sths.tpsph+hR............
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