GenomeNet

Database: Pfam
Entry: DUF3236
LinkDB: DUF3236
Original site: DUF3236 
#=GF ID   DUF3236
#=GF AC   PF11576.4
#=GF DE   Protein of unknown function (DUF3236)
#=GF AU   Pollington J
#=GF SE   pdb_3brc
#=GF GA   25.00 25.00;
#=GF TC   151.40 151.30;
#=GF NC   24.10 23.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR012019;
#=GF CC   This family of proteins with unknown function appears to be
#=GF CC   restricted to Methanobacteria.
#=GF SQ   34
#=GS A2SU94_METLZ/6-158  AC A2SU94.1
#=GS L0HD08_METFS/1-153  AC L0HD08.1
#=GS A4FW26_METM5/3-155  AC A4FW26.1
#=GS D3E196_METRM/3-154  AC D3E196.1
#=GS K6TNJ0_9EURY/3-155  AC K6TNJ0.1
#=GS Y488_METJA/4-156    AC Q57912.1
#=GS Y488_METJA/4-156    DR PDB; 3WB0 B; 4-156;
#=GS Y488_METJA/4-156    DR PDB; 3WB2 A; 4-156;
#=GS Y488_METJA/4-156    DR PDB; 3WB2 D; 4-156;
#=GS Y488_METJA/4-156    DR PDB; 3WB0 C; 4-156;
#=GS Y488_METJA/4-156    DR PDB; 3WB1 C; 4-156;
#=GS Y488_METJA/4-156    DR PDB; 3WB1 D; 4-156;
#=GS Y488_METJA/4-156    DR PDB; 3WB2 B; 4-156;
#=GS Y488_METJA/4-156    DR PDB; 3WB0 D; 4-156;
#=GS Y488_METJA/4-156    DR PDB; 3WB1 B; 4-156;
#=GS Y488_METJA/4-156    DR PDB; 3WB2 C; 4-156;
#=GS Y488_METJA/4-156    DR PDB; 3WB1 A; 4-156;
#=GS Y488_METJA/4-156    DR PDB; 3WB0 A; 4-156;
#=GS O27213_METTH/2-154  AC O27213.1
#=GS O27213_METTH/2-154  DR PDB; 3BRC B; 2-154;
#=GS O27213_METTH/2-154  DR PDB; 3BRC A; 2-154;
#=GS Q8TZB7_METKA/2-154  AC Q8TZB7.1
#=GS K2QC83_METFO/3-155  AC K2QC83.1
#=GS A5UKQ1_METS3/3-155  AC A5UKQ1.1
#=GS G0H2X1_METMI/3-155  AC G0H2X1.1
#=GS N6UTV0_9EURY/1-104  AC N6UTV0.1
#=GS E1RJE0_METP4/3-155  AC E1RJE0.1
#=GS R9SJE0_9EURY/3-155  AC R9SJE0.1
#=GS T2GJY3_METTF/2-154  AC T2GJY3.1
#=GS H1KWM5_9EURY/1-153  AC H1KWM5.1
#=GS R7PR67_9EURY/3-155  AC R7PR67.1
#=GS F0S2B9_DESTD/6-156  AC F0S2B9.1
#=GS A6UWJ5_META3/3-161  AC A6UWJ5.1
#=GS C7P7L0_METFA/1-153  AC C7P7L0.1
#=GS D5VQF5_METIM/6-158  AC D5VQF5.1
#=GS C9RF72_METVM/1-153  AC C9RF72.1
#=GS A6VH82_METM7/3-155  AC A6VH82.1
#=GS A6UQE0_METVS/3-155  AC A6UQE0.1
#=GS Q6LX55_METMP/3-155  AC Q6LX55.1
#=GS D9PY09_METTM/2-154  AC D9PY09.1
#=GS B9AGK8_METSM/3-155  AC B9AGK8.1
#=GS D3S6G6_METSF/1-153  AC D3S6G6.1
#=GS D2ZN25_METSM/3-155  AC D2ZN25.1
#=GS A9A9G7_METM6/3-155  AC A9A9G7.1
#=GS E3GZ38_METFV/3-155  AC E3GZ38.1
#=GS D7DUD3_METV3/4-166  AC D7DUD3.1
#=GS F8AN83_METOI/3-161  AC F8AN83.1
#=GS F6BF29_METIK/1-153  AC F6BF29.1
A2SU94_METLZ/6-158             i-DCCVSSAYSQSLNGTRLGDTAEETMSIREYIKSSRHIVVPNHDDRKIAVINSVLSSFG..........LPRAVHLCIPTNSPDLTRTPAVSKALMALDITGADLVIARGRLGVPGSGSMLVIMDSRGRILSASLSPSHLYHAKSISDAVTHEMEEALVRVGF
L0HD08_METFS/1-153             .MEDLIRGAYHESLAGARKGDTDAELEAIRHYIRGARTIIVPNRNTVKISVINTVLAEFG..........LPRAVHLHCDTNCCDISRMPALTKALMALDISGCDLVIARGRLGMPGSGSMLVILDNRGRILTAGLSPSHSIHKKPVELAVHDEMVMALERIGL
A4FW26_METM5/3-155             .IEETIKTAYGESLNSARFGDKFEEIDAIQSIIKSAKSVVVATRNEKKFKVVFNIISKIT..........DANISMIEIPTNSADLTRMPAVSKGLIAVDSSDADIIISRGRLGIPGSGSFLLIMDKKGRILTGSISPSSIIHKNPIDKTVELELINALERIGI
D3E196_METRM/3-154             .FEESIRKASIQSYEGTRKGDTIEEIEAIQNYIRNA-KIVVPNKNGIKVEVINEVLAKFN..........IPPAEYLQVNTNYADFSRMPAIAKAMIAVDQSDADLVIARGRLGIPGSGSFLVFMDSKSRILTAATSPSHIIHNQPLEKTVYKETLEALKKVGF
K6TNJ0_9EURY/3-155             .FEKTIKNAYEESVDGERFGDTEAELLSLQKHIRSCKRIVVPNRNTVKTKVINEVLTRFN..........LPSAEHLCIHTNSADLSRTPAITKALMALDTCDCDLVIARGRLGVPGSGSLLVIMDKKGRILSAATSPSHILHGKEVEDAVRDEITHALLRIGF
Y488_METJA/4-156               .MEEIIKKAFIESINNIRRGDKEEELKKIQEKIVNAKKIVVATNNQKKFKVIRDIMLRVC..........NAEIKMLDIDTRFADLTRMPALTKGLIALDIEKADLYIARGRLGAPGSGSMLVILDEKGRVLTASLSPSSVIHKEDIEERIKKELIEALSRIGI
#=GR Y488_METJA/4-156    SS    .HHHHHHHHHHHHHTT---S--HHHHHHHHHHHHT-SEEEES-SSHHHHHHHHHHHTTT-..........--EEEEESS-GGGGGGSSSHHHHHHHHHHHH---SEEEEEEE-SSTTS-EEEEEEETTS-EEEEEEE--HHHH---HHHHHHHHHHHHHHTTT-
O27213_METTH/2-154             .LEDLIGKAYLESAEDRRRGDRSEEVEAIRKYIRSARRTVVPNWNAEKVDAINDVLRSFN..........LREAEHLQFNTNWADLTRMPAVTKALMALDISGADLVIARGRLGVPGSGSLLVIMDSRGRLLSAAMSPPHVIHSMEVREAVRSEMTHALERIGF
#=GR O27213_METTH/2-154  SS    .HHHHHHHHHHHHHTT---S--HHHHHHHHHHHHH-S-EEE----HHHHHHHHHHHHHTT..........----EE--S--GGGGGSSSHHHHHHHHHHHHH--SEEEEEEE-SSTTS-EEEEEEETTS-EEEEEEE--TTTS---HHHHHHHHHHHHHHTTT-
Q8TZB7_METKA/2-154             l-KETLLKAWWESWEGTRRGDEEREVEGLREYLTSADRLAVVTGNEDKLRAVNKVLRRFG..........LPEAEMIRVPTEMADATPCPAIFKAIMGVQVSDADVVIARGRLGVPGSGAMTVFMDARCRLLTAALSPPHVLHEMSVKEAMEREAEEALRRLGM
K2QC83_METFO/3-155             .FEKTIKNAYAESVEGERFGDTEEELLSLQKHIRSCKRIVVPNRNTVKTKAINEVLTKFN..........LPSAEHLCIHTNSADLSRTPAITKALMALDTCDCDLVIARGRLGVPGSGSLLVIMDKKGRILSAATSPSHILHGKKVEDAVRDEITHALLRIGF
A5UKQ1_METS3/3-155             .FEEMIKKALDESRNNCRLGDTLEEVREIQNYIKNAEKIYIPNKNGIKVDVLNKVLREYN..........LPSAKILQINTNEADSNRSPAFAKAIMALDVCDADLIIARGRLGLPGSGSLLLFVDNKGRILTCGTSPSHAISQKTLEDAVYEEANEALQKIGF
G0H2X1_METMI/3-155             .IENTIKSAYEESLNNARFGDKIEEIDTIQSTIKSAKNVTVATSNEKKFKVVSDIISRIT..........DANISMLEIPTNSADLTRMPALNKGLIAVDSSDADLIITRGRLGIPGSGSLLLIMDKKGRILTGSVSPSSIIHKNPIDKTVELELIVALERIGI
N6UTV0_9EURY/1-104             .--------------------------------------------------IKNIMLKFV.........kDAEIKMTDIDTSFADLTRMPAIFKALMAVDVENGDIYIARGRLGIPGSGAMLVILDNKGRILTASLSPPSSIHKEKIEKRIEKEIIEALNRVGI
E1RJE0_METP4/3-155             .LEDFISKACIESSTGIRRGDKREETEGIREYILNSKTIVIPNCNDEKVAAVNEVLDELD..........LPKAGHLNIHTDSCDVSRMPAVTKALMALDMTDADLIIARGRLGVPGSGSMLVIVDCKGRLLSASISPSHHIHGKTVYQAVKDEMTDALSRIGF
R9SJE0_9EURY/3-155             .FEKMIKNAFEESENNCRFGDKIEEVHEIQTYIKNAKKIYVPNKNGIKVKVLNKVLKEYG..........LNEAHILKINTNFADTSRIPALSKAYIALDQCDCDLIISRGRLGVPGSGSLLVFIDNKGRILTAGSSPSHAVTSKPLEEAVYMEAVEALEKVGF
T2GJY3_METTF/2-154             .LEDLIGKAYLESAEDRRRGDRSEEVEAIREYIRSARRTVVPNWNAEKVDAINDVLRSFN..........LREAEHLQFNTNWADLTRMPALTKALMALDISGADLVIARGRLGVPGSGSLLVIMDSRGRLLSAAMSPPHVIHSMEVREAVRSEMTHALERIGF
H1KWM5_9EURY/1-153             .MEKIIKKAYTESIENERKGDKEEEVEAIKRIILNAKKIIIATNNQKKFKVIGDILSHIV..........NAKIEMLNINTNYADLTRMPAVNKGLMAVDTEKADLIIARGRLGVPGSGSMLVIMDGKGRILSASLSPSSVLHKEDIEVRIKKELIDALKRIGI
R7PR67_9EURY/3-155             .FEEMIKKALDESRNNCRLGDTLEEVQEIQNYIKNAEKIYIPNKNGIKVDVLNKVLREYN..........LPSAKILQINTNEADSNRSPAFAKAIMALDVCDADLIIARGRLGLPGSGSLLLFVDNKGRILTCGTSPSHAISQKTLEDAVYEEANEALQKIGF
F0S2B9_DESTD/6-156             l--ELFKNAFLESLVGNRKGDKPEETALLRERILKG-KIGIVTNNKKKFTIAKKTISLFG..........IKNISQIEIPTEIFDLTEIPTLSKALAGRFFKNCNFYVARGRLGAPGSGALTIMIDEFGHVISAVTSPPHHLHKFSLETSVFLDIFRLLKRLGF
A6UWJ5_META3/3-161             n-NKIIKDAYLESITNKRCGDKIEELLYIQNKILNAKKIVVATNNKKKFDIINNILISLFkny....dkpLPTIEKLDLPTNSVDLTRFPAINKGLIAVDTSDADIVIARGRLGAPGSGSMLIIMNNKGRCLSASLSPTSLIHKKDIEDAVKDELNEALERIGI
C7P7L0_METFA/1-153             .MEEIIKNAFIESINNTRRGDKREEVKKIQEKIINAKKIVVATNNQKKFKVIRDIMLRIC..........NAEIKMLNIDTRFADLTRMPALNKGLMAVDTEKADLYIARGRLGVPGSGSMLIILDEKGRVLTAALSPSSVIHKEDIEERIKKELIEALKRIGI
D5VQF5_METIM/6-158             l-SNLIKRAYLQSLKGEREGDREEEVEAIRETIKSAKKIVVATNNEKKFKVIKNIISEIC..........DAEIKMIDLDTKVADLSRMPAIAKGLIALDVEDADLYIARGRLGVPGSGSMLVIMDSKGRILTASLSESSAIHKESLERRIEKEVKDALRRVGL
C9RF72_METVM/1-153             .MEEIIKRAYLESLDGRRFGDKKEEVEKIREKILSAKKIVVATNNQKKFNIIKDIISKIC..........NATITMIDIDTRFADLTRVPALNKGLMALDTETADLVIARGRLGVPGSGSMLVILDGKGRILTASLSPSSIVHRENIEDRIKKEIIEALSRIGI
A6VH82_METM7/3-155             .IEKTIKCAYDESINNARFGDKFEEIEAIQSTIKSAKSVVVATRNEKKFKVVSDIISKIT..........DADISMIEIPTNSADLTRMPALNKGLIAVDSSNADIVVSRGRLGIPGSGSLLIILDKKGRILTGSVSPSSIIHKNPIEKTVELELINALERIGI
A6UQE0_METVS/3-155             .LEKLISNAYAESLKNMRFGDKSEELSEIQSIILNSKRIVVATNNEKKFKVVFDIISKVC..........NAEVLMLGISTNSADLTRMPALSKGLIAVDSTDADVVISRGRLGIPGSGSLLLIMDKKGRILTGAMSSSSLIHKNRIEDSINLELTIALERIGI
Q6LX55_METMP/3-155             .IENTIKSAYEESLNNARFGDKIEEIDAIQSTIKSAKNVTVATSNEKKFKVVSDIISRIT..........DANISMLEIPTNSADLTRMPALNKGLIAVDSSDADLIITRGRLGIPGSGSLLLIMDKKGRILTGSVSPSSIIHKNPIDKTVELELITALERIGI
D9PY09_METTM/2-154             .LEDIIASAYLESAEDRRRGDREEEVRAVRDYISGAQRIVVPNWNREKVDVINEVLRSFN..........LREAEHLQFNTNWADLTRMPAVTKALMALDISGADLVIARGRLGVPGSGSLLVIMDSRGRILSAAMSPPHVIHEMGVQEAVRSEMTHALERIGF
B9AGK8_METSM/3-155             .FEEMIKKALDESRNNCRLGDTLEEVQEIQNYIKNAEKIYIPNKNGIKVDVLNKVLREYN..........LPSAKILQINTNEADSNRSPAFAKAIMALDVCDADLIIARGRLGLPGSGSLLLFVDNKGRILTCGTSPSHAISKKTLEDAVYEEANEALQKIGF
D3S6G6_METSF/1-153             .MEEIIKNAFIESINNVRRGDKEEELKKIQEKIINAKKIVVATNNQKKFKVIRDIILRVC..........NAEIKMLDIDTRFADLTRMPAITKGLLALDIEKADLYIARGRLGVPGSGSMLVILDEKGRILTASLSPSSVVHKEDIEKRIEKEMIEALGRVGI
D2ZN25_METSM/3-155             .FEEMIKKALDESRNNCRLGDTLEEVQEIQNYIKNAEKIYIPNKNGIKVDVLNKVLREYN..........LPSAKILQINTNEADSNRSPAFAKAIMALDVCDADLIIARGRLGLPGSGSLLLFVDNKGRILTCGTSPSHAISQKTLEDAVYEEANEALQKIGF
A9A9G7_METM6/3-155             .IEETIKTAYEESLNNTRFGDKFEEIEAIQSTIKSAKSVVVATRNEKKFKVVFDIISKIT..........DANISMIEIPTNSADLTRIPAVNKGLIAVDSSNADIVISRGRLGIPGSGSFLLIMDKKGRILTGSVSPSSIIHKNPIENTVELELLNALERIGI
E3GZ38_METFV/3-155             .MEKLIKKAYVESVEGRRQGDKIKEVKEIQKYILNAKNIVVPNKTKEKVKAINEVLEKFG..........IQKAKHLKFYTDACDLNRTPAISKALMALDIVDCDLVIARGRLGVPGSGSMLVIMDSKGRILSAALSPPHIIHKKSVEKAVKDEMTTALKRIGL
D7DUD3_METV3/4-166             v-NKIIKNSYIHSLENCRNGDQIEEIEAIQNVIKNSKKIVVATSNGKKFKVVKNIILKVLdnhcndnnqnNVNIEMLDICTNSADLTRMPALTKGLIAVDITDADLIIARGRLGIAGSGSLLLLMDGKGRILTGAMSPSSIIHKESIEHKMEFELLQALKKIGI
F8AN83_METOI/3-161             .IEDSIKRAYEESCHGNRMGDKKEEVELIRQTILNAKNIVIATNNPKKFKVVKDILLEILdke....knnNISVSKIDLHTEVSDLTRMPVLNKGLIAVDISNADIVIARGRLGVPGSGSMLLIMDNKGRILTGSLSPPSVIHKRNIEDTVKSELIDALKRIGI
F6BF29_METIK/1-153             .MENLIKKAYTQSIKNKRRGDEEEEVEAIKRIILNAKKIIIATNNQKKFKVISDILSRVV..........NAKIEMLNINTNCADLTRMPAVSKGLIAVDTEEADVVIARGRLGVPGSGSMLVIMDGKGRILSASLSPSSVVHKEDIETRIKKEIIDALKRVGI
#=GC SS_cons                   .HHHHHHHHHHHHHTT---S--HHHHHHHHHHHHC-SEEEES-SSHHHHHHHHHHHCCTT..........--EEEEESS-GGGGGGSSSHHHHHHHHHHHHH--SEEEEEEE-SSTTS-EEEEEEETTS-EEEEEEE--CCCC---HHHHHHHHHHHHHHTTT-
#=GC seq_cons                  .hEchIKpAYhESlpspRhGD+.EElctIpphIpsAK+IVVsspNpcKhcVlscllpchs...........sphchLpIsTN.ADLTRhPAlsKuLhAlDhscADLlIARGRLGlPGSGShLlIhDsKGRILTAuhSPSplIH+cslEcsVccEhhcALcRIGh
//
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