GenomeNet

Database: Pfam
Entry: DUF3236
LinkDB: DUF3236
Original site: DUF3236 
#=GF ID   DUF3236
#=GF AC   PF11576.7
#=GF DE   Protein of unknown function (DUF3236)
#=GF AU   Pollington J
#=GF SE   pdb_3brc
#=GF GA   25.00 25.00;
#=GF TC   186.40 183.90;
#=GF NC   23.90 23.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 26740544 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR012019;
#=GF CC   This family of proteins with unknown function appears to be
#=GF CC   restricted to Methanobacteria.
#=GF SQ   19
#=GS A0A162FNU5_9EURY/3-155  AC A0A162FNU5.1
#=GS A2SU94_METLZ/6-158      AC A2SU94.1
#=GS F0S2B9_DESTD/6-156      AC F0S2B9.1
#=GS A0A117KQN8_9EURY/2-154  AC A0A117KQN8.1
#=GS L0HD08_METFS/1-153      AC L0HD08.1
#=GS A6UWJ5_META3/3-161      AC A6UWJ5.1
#=GS D3E196_METRM/3-154      AC D3E196.1
#=GS Y488_METJA/4-156        AC Q57912.1
#=GS Y488_METJA/4-156        DR PDB; 3WB0 B; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 5D5Q D; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 3WB1 C; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 3WB1 D; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 5D5Q B; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 5D5Q A; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 3WB1 B; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 3WB2 C; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 5D5Q C; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 3WB2 A; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 3WB2 D; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 3WB0 C; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 3WB2 B; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 3WB0 D; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 3WB1 A; 4-156;
#=GS Y488_METJA/4-156        DR PDB; 3WB0 A; 4-156;
#=GS D5VQF5_METIM/6-158      AC D5VQF5.1
#=GS A0A125RAW4_9EURY/3-155  AC A0A125RAW4.1
#=GS Q6LX55_METMP/3-155      AC Q6LX55.1
#=GS Q6LX55_METMP/3-155      DR PDB; 5D5P D; 3-155;
#=GS Q6LX55_METMP/3-155      DR PDB; 5D5P A; 3-155;
#=GS Q6LX55_METMP/3-155      DR PDB; 5D5P C; 3-155;
#=GS Q6LX55_METMP/3-155      DR PDB; 5D5P B; 3-155;
#=GS O27213_METTH/2-154      AC O27213.1
#=GS O27213_METTH/2-154      DR PDB; 3BRC B; 2-154;
#=GS O27213_METTH/2-154      DR PDB; 3BRC A; 2-154;
#=GS A0A126QZE7_9EURY/3-154  AC A0A126QZE7.1
#=GS Q8TZB7_METKA/2-154      AC Q8TZB7.1
#=GS E3GZ38_METFV/3-155      AC E3GZ38.1
#=GS D7DUD3_METV3/4-166      AC D7DUD3.1
#=GS A5UKQ1_METS3/3-155      AC A5UKQ1.1
#=GS E1RJE0_METP4/3-155      AC E1RJE0.1
#=GS R9SJE0_9EURY/3-155      AC R9SJE0.1
A0A162FNU5_9EURY/3-155             .FEKMIKKAFDESLNDCRFGDTLDEIKEIQNYIQNAEKIYIPNKNGIKVEVLNNILKEYG..........LPPADILNLNTNTADTSRIPALAKAYIALDQCDGDLIIARGRLGIPGSGSLLIFIDNKGRILTAGTSPSHLIHNKSIETAVENEAREALEKIGF
A2SU94_METLZ/6-158                 i-DCCVSSAYSQSLNGTRLGDTAEETMSIREYIKSSRHIVVPNHDDRKIAVINSVLSSFG..........LPRAVHLCIPTNSPDLTRTPAVSKALMALDITGADLVIARGRLGVPGSGSMLVIMDSRGRILSASLSPSHLYHAKSISDAVTHEMEEALVRVGF
F0S2B9_DESTD/6-156                 l--ELFKNAFLESLVGNRKGDKPEETALLRERILKG-KIGIVTNNKKKFTIAKKTISLFG..........IKNISQIEIPTEIFDLTEIPTLSKALAGRFFKNCNFYVARGRLGAPGSGALTIMIDEFGHVISAVTSPPHHLHKFSLETSVFLDIFRLLKRLGF
A0A117KQN8_9EURY/2-154             .LEEHIKKAYNESAKGKRKGDKHIEVEKIREYILSAENIIIPNWDEKKLKSINKILKEFG..........LPKAKGLKIHTNAADLTRMPTITKALMAVDTTDADLIIARGRLGAPGSGSMLIIMDHKGRILSAAISSPHIIHGKSLEKAVEEELKTALQRLGL
L0HD08_METFS/1-153                 .MEDLIRGAYHESLAGARKGDTDAELEAIRHYIRGARTIIVPNRNTVKISVINTVLAEFG..........LPRAVHLHCDTNCCDISRMPALTKALMALDISGCDLVIARGRLGMPGSGSMLVILDNRGRILTAGLSPSHSIHKKPVELAVHDEMVMALERIGL
A6UWJ5_META3/3-161                 n-NKIIKDAYLESITNKRCGDKIEELLYIQNKILNAKKIVVATNNKKKFDIINNILISLFkny....dkpLPTIEKLDLPTNSVDLTRFPAINKGLIAVDTSDADIVIARGRLGAPGSGSMLIIMNNKGRCLSASLSPTSLIHKKDIEDAVKDELNEALERIGI
D3E196_METRM/3-154                 .FEESIRKASIQSYEGTRKGDTIEEIEAIQNYIRNA-KIVVPNKNGIKVEVINEVLAKFN..........IPPAEYLQVNTNYADFSRMPAIAKAMIAVDQSDADLVIARGRLGIPGSGSFLVFMDSKSRILTAATSPSHIIHNQPLEKTVYKETLEALKKVGF
Y488_METJA/4-156                   .MEEIIKKAFIESINNIRRGDKEEELKKIQEKIVNAKKIVVATNNQKKFKVIRDIMLRVC..........NAEIKMLDIDTRFADLTRMPALTKGLIALDIEKADLYIARGRLGAPGSGSMLVILDEKGRVLTASLSPSSVIHKEDIEERIKKELIEALSRIGI
#=GR Y488_METJA/4-156        SS    .HHHHHHHHHHHHHTT---S--HHHHHHHHHHHHT-SEEEES-SSHHHHHHHHHHHTTT-..........--EEEEESSTGGGGGGSSSHHHHHHHHHHHHS--SEEEEEEE-SSTTS-EEEEEEETTS-EEEEEEE--HHHH---HHHHHHHHHHHHHHTTT-
D5VQF5_METIM/6-158                 l-SNLIKRAYLQSLKGEREGDREEEVEAIRETIKSAKKIVVATNNEKKFKVIKNIISEIC..........DAEIKMIDLDTKVADLSRMPAIAKGLIALDVEDADLYIARGRLGVPGSGSMLVIMDSKGRILTASLSESSAIHKESLERRIEKEVKDALRRVGL
A0A125RAW4_9EURY/3-155             .FEKMIKNAFEESRNNCRFGDTIEEITEIQDYIKNAEKIYIPNKNGIKVEVLNRVLKTYG..........LPKAEILQINTNTADTSRIPALAKAYMALDQSDADLIIARGRLGIPGSGSLLIFIDNKGRILTAGTSPSHVIHKKTIEEAVYKEACEALEKIGF
Q6LX55_METMP/3-155                 .IENTIKSAYEESLNNARFGDKIEEIDAIQSTIKSAKNVTVATSNEKKFKVVSDIISRIT..........DANISMLEIPTNSADLTRMPALNKGLIAVDSSDADLIITRGRLGIPGSGSLLLIMDKKGRILTGSVSPSSIIHKNPIDKTVELELITALERIGI
#=GR Q6LX55_METMP/3-155      SS    .HHHHHHHHHHHHHTT---S--HHHHHHHHHHHHT-SEEEES---HHHHHHHHHHHTTT-..........--EEEE-SS--GGGGGSSSHHHHHHHHHHHHS--SEEEEEEESSSTTS-EEEEEEETTS-EEEEEEE--TTTS---HHHHHHHHHHHHHHTTT-
O27213_METTH/2-154                 .LEDLIGKAYLESAEDRRRGDRSEEVEAIRKYIRSARRTVVPNWNAEKVDAINDVLRSFN..........LREAEHLQFNTNWADLTRMPAVTKALMALDISGADLVIARGRLGVPGSGSLLVIMDSRGRLLSAAMSPPHVIHSMEVREAVRSEMTHALERIGF
#=GR O27213_METTH/2-154      SS    .HHHHHHHHHHHHHTT---S--HHHHHHHHHHHHH-S-EEE----HHHHHHHHHHHHHTT..........----EE--S--GGGGGSSSHHHHHHHHHHHHH--SEEEEEEE-SSTTS-EEEEEEETTS-EEEEEEE--TTTS---HHHHHHHHHHHHHHTTT-
A0A126QZE7_9EURY/3-154             .FEESIKKASIQSYEGSRKGDTEEEIKEIQNYIRNA-KIVVPNKNGIKVEVINEVLKRFK..........IPPAEHLDVNTNYADFSRTPAISKAKIAIDQSDADLVIARGRLGIPGSGSFLVFMDNKSRILTAASSPSHIIHKQSLEKTVYRETLDALKKVGF
Q8TZB7_METKA/2-154                 .LKETLLKAWWESWEGTRRGDEEREVEGLREYLTSADRLAVVTGNEDKLRAVNKVLRRFG..........LPEAEMIRVPTEMADATPCPAIFKAIMGVQVSDADVVIARGRLGVPGSGAMTVFMDARCRLLTAALSPPHVLHEMSVKEAMEREAEEALRRLGM
E3GZ38_METFV/3-155                 .MEKLIKKAYVESVEGRRQGDKIKEVKEIQKYILNAKNIVVPNKTKEKVKAINEVLEKFG..........IQKAKHLKFYTDACDLNRTPAISKALMALDIVDCDLVIARGRLGVPGSGSMLVIMDSKGRILSAALSPPHIIHKKSVEKAVKDEMTTALKRIGL
D7DUD3_METV3/4-166                 v-NKIIKNSYIHSLENCRNGDQIEEIEAIQNVIKNSKKIVVATSNGKKFKVVKNIILKVLdnhcndnnqnNVNIEMLDICTNSADLTRMPALTKGLIAVDITDADLIIARGRLGIAGSGSLLLLMDGKGRILTGAMSPSSIIHKESIEHKMEFELLQALKKIGI
A5UKQ1_METS3/3-155                 .FEEMIKKALDESRNNCRLGDTLEEVREIQNYIKNAEKIYIPNKNGIKVDVLNKVLREYN..........LPSAKILQINTNEADSNRSPAFAKAIMALDVCDADLIIARGRLGLPGSGSLLLFVDNKGRILTCGTSPSHAISQKTLEDAVYEEANEALQKIGF
E1RJE0_METP4/3-155                 .LEDFISKACIESSTGIRRGDKREETEGIREYILNSKTIVIPNCNDEKVAAVNEVLDELD..........LPKAGHLNIHTDSCDVSRMPAVTKALMALDMTDADLIIARGRLGVPGSGSMLVIVDCKGRLLSASISPSHHIHGKTVYQAVKDEMTDALSRIGF
R9SJE0_9EURY/3-155                 .FEKMIKNAFEESENNCRFGDKIEEVHEIQTYIKNAKKIYVPNKNGIKVKVLNKVLKEYG..........LNEAHILKINTNFADTSRIPALSKAYIALDQCDCDLIISRGRLGVPGSGSLLVFIDNKGRILTAGSSPSHAVTSKPLEEAVYMEAVEALEKVGF
#=GC SS_cons                       .HHHHHHHHHHHHHTT---S--HHHHHHHHHHHHT-SEEEES-SSHHHHHHHHHHHTTTT..........--EEEEESSTGGGGGGSSSHHHHHHHHHHHHS--SEEEEEEESSSTTS-EEEEEEETTS-EEEEEEE--TTTS---HHHHHHHHHHHHHHTTT-
#=GC seq_cons                      .hEchIKcAahEShpssRpGDphEElctIppYIpsAc+IlVPNpNtcKlcVlNclLpcas..........lspAchLclsTNhADloRhPAlsKALhAlDhoDADLlIARGRLGlPGSGShLlhhDsKGRILTAuhSPSHlIHpcolEcAVccEhh-ALcRlGh
//
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