GenomeNet

Database: Pfam
Entry: DUF3573
LinkDB: DUF3573
Original site: DUF3573 
#=GF ID   DUF3573
#=GF AC   PF12097.7
#=GF DE   Protein of unknown function (DUF3573)
#=GF AU   Assefa S, Coggill P, Bateman A
#=GF SE   PFAM-B_2286 (release 23.0)
#=GF GA   26.60 26.60;
#=GF TC   27.30 30.40;
#=GF NC   26.30 25.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 26740544 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR021956;
#=GF CC   This family of proteins is functionally uncharacterised. This
#=GF CC   protein is found in bacteria. Proteins in this family are
#=GF CC   typically between 372 to 530 amino acids in length.
#=GF SQ   6
#=GS Q5NIP1_FRATT/1-374        AC Q5NIP1.1
#=GS Q5NI23_FRATT/16-237       AC Q5NI23.1
#=GS Q5NGC7_FRATT/4-422        AC Q5NGC7.1
#=GS A0A0K2DUN8_PISSA/101-299  AC A0A0K2DUN8.1
#=GS Q5NGC6_FRATT/100-341      AC Q5NGC6.1
#=GS Q5NH68_FRATT/10-373       AC Q5NH68.1
Q5NIP1_FRATT/1-374                   ..................................MLNKINIVFICFLVLSITPFMGFS..........................NSFKNSNEQSQKSNSIDKQGITQLQSQIANIQAEINHLTQIKNS.......NNSAQFATYSSKVENIGLPNSLPDN---------...NKLTLDIMTNIDSDSSIINLSDCSIGGIFDKDGGINVGGAPAITTQGEVTFLGAYSGNNTVPIGMISSNLFASTVMGLRNKFDSYSIFFGGKIEADAQLWFGSSTIS-....NKATNLASNGQNISLTAANLYFLSNVGHYVTAEIEFNTTELNNFSLGNAFVIFGNLDTSPFFLTAGRNK.LSVGAFGGGGPWTGGITkNFLSPGKVTNVSLNYKSDVWNANVAVFG....S....NDNQFNFSTGLFYAQKWTQDIAVGFNTGYVYNMAGAGNPSLSRFLQSQGHPTDTIGSF........
Q5NI23_FRATT/16-237                  ...............................mkn------------------------..........................--------------------------------------------.......----------------------------------...----------------------------------------------------------------RISKNLYASTIIGQRDKFPNYSMFFGGYFEGDAQTWFGSQINRA....GGTSDFPATGQNIYMTTVDLYFLANVGEYMTAVFDFLTDDNSDFGLRNGFVILGNLDTSPFFVTVGKNRrISVGTYGGGGPWSNGLSeDFLAPGSVTNISLNYKTSSINANVTTFG....T....QNNHLDFSAAIFYANKLTTDLSYGLNFGYIFNLAGADNTSISKFLDSIDKGNDSVGT-i.......
Q5NGC7_FRATT/4-422                   ................................kf--KKTCLIVSSLLACSGLAYSEDSpqvvsqggplgatsigdqnlgqpdpnASGASSTTQTTGSNLNDRELLLKLQQQVQQLQGQLQQLKAQGNGgglqntyNGSSQFTTYSSKVDGNKNPRTLGGNGESKDLSQAligGQTSSDIMGNVNASNSIINLASEPLGGVFNQKGGIDVGGAPAITTQGQVTYLGSYSGNNSIPIGQISSNLFASTLLGQREKFDDYSVFFGGFIEADAQAWFGSAVTKV....QNAGQLSSNGQNIYLTSANLYFLSNLGHYVTAQFDFDTNESGSFSLGNAFVIFGNLDISPFFVTAGRNK.LSVGSYGGGGTWTSGIT.KFLSPNQVTNVSIDYKDQVWNANIAVFG....S....DDRRANFSTGLFYADSWTPNLAAGFNVGYVFNIAGAGNSSIANSLANLNRSSDNVGAL........
A0A0K2DUN8_PISSA/101-299             llsigglletdigygrntnldadyfhksqslshs------------------------..........................--------------------------------------------.......----------------------------------...------------------------------------------------------------------------------------------------------------....-----------DAEVTAARLHIMANINDWTTGFFYYDML-ANNLRTGK--ITFGNLNETPFYASIGKSY.SYFGNWSGPNIITTDVD.ASLFESRSNNAMLGYTQGGFNAQVGLTSpastVntpnHNNHAGFLTQAHYTLDLGNNNSAYLGAGYMSDLHGTEVSALSQAQAADGH--------tripaa..
Q5NGC6_FRATT/100-341                 ..............................sssd------------------------..........................--------------------------------------------.......----------------------------------...-------------------------------DREVDVGNQVKITTQGEISYVGSFSSNNTVPIGQLPSNLFASSILRQRAFFDDYSIFFGGFIQADAQIWNGTDITT-....RNGGNFTGNGENIYLTSATLYFLANLGHYVTANLDFVANQNNNYDLQDAFVIFGNLDTTPVFVSVGKYR.PSVGSFGGGGPWTSGITaNMFRPLRVTNAAINYRGDTSNANFTVFD....A....K-NHATFSVAYFDAVSIPNIAQVGFNLGYMHDIRGANNR-------------------fnfidkrv
Q5NH68_FRATT/10-373                  ..................................YIYKKLLIY-SFFMCSIC------..........................HSYAELNNQIS---------ILELQKQIKELQTEINHFEETKI-.......NENFEFTTYSSEVVDSK---SKLRNKETKVLYTV...QNNNVDIIQNISPESTIIDLRGKPLGKIFNQNGSIDVGNAPAITTDGQAAYLGSYSGNNSIPIGMIPGKLFASTIILQKEKFDQYSIFLGGLIRVDAQTWFGDSIPRVdfnnNPTTSFDSKGQNIYPSTARLFFLANMGNYITAAYNVSTSELNNFNIGDAFVIIGNMDVSPYFITVGKST.LTIANLGGGGPSTSGIA.NFLNTGRATNISLNYKTSTLNVSVAFFS....T....NDQKANFSAGLFYADKWTDNLSVGFNTGYVYDLAGAENSSIPRIALN-----KTIGAFsi......
#=GC seq_cons                        ................................p..........................................................................................................................................................................pttlsVGststITTpGphsalGuaSuNNolPIG.IsuNLFASTlltQRpKFDsYSlFFGGhIcuDAQhWFGoslsp.....psssshsusGQNIYlToAsLYFLANlGcYlTAta-FsTs-sNNFsLGsAFVIFGNLDsSPFFlTlGKs+.lSVGsaGGGGPWToGIo.sFLsPu+VTNlSLNYKssshNANVulFu....o....psN+AsFSsulFYAschTsslusGFNsGYlaslAGAsNoSluphhts.s+..cslGs.........
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