GenomeNet

Database: Pfam
Entry: DUF746
LinkDB: DUF746
Original site: DUF746 
#=GF ID   DUF746
#=GF AC   PF05344.8
#=GF DE   Domain of Unknown Function (DUF746)
#=GF AU   Yeats C, Eberhardt R
#=GF SE   Yeats C
#=GF GA   24.80 24.80;
#=GF TC   24.90 37.80;
#=GF NC   24.10 24.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   21348639
#=GF RT   Ab Initio Modeling Led Annotation Suggests Nucleic Acid Binding
#=GF RT   Function for Many DUFs.
#=GF RA   Rigden DJ;
#=GF RL   OMICS 2011;0:0-0.
#=GF DR   INTERPRO; IPR008008;
#=GF CC   This is a short conserved region found in some transposons.
#=GF CC   Structural modelling suggests this domain may bind nucleic acids
#=GF CC   [1].
#=GF SQ   15
#=GS Q8XUK9_RALSO/243-306      AC Q8XUK9.1
#=GS A0A0D5V318_9BURK/358-416  AC A0A0D5V318.1
#=GS Q8XUK9_RALSO/95-158       AC Q8XUK9.1
#=GS B2JXE0_BURP8/108-171      AC B2JXE0.1
#=GS B9JG85_AGRRK/49-110       AC B9JG85.1
#=GS Q63II2_BURPS/78-141       AC Q63II2.1
#=GS Q63IL9_BURPS/242-305      AC Q63IL9.1
#=GS Q8Y104_RALSO/361-422      AC Q8Y104.1
#=GS A0A0D5V318_9BURK/102-163  AC A0A0D5V318.1
#=GS Q8Y104_RALSO/102-164      AC Q8Y104.1
#=GS Q63IL9_BURPS/94-157       AC Q63IL9.1
#=GS B2JXE0_BURP8/255-318      AC B2JXE0.1
#=GS B9TBN6_RICCO/8-59         AC B9TBN6.1
#=GS A0A0C4YGJ0_9BURK/97-160   AC A0A0C4YGJ0.1
#=GS Q63II2_BURPS/1-32         AC Q63II2.1
Q8XUK9_RALSO/243-306                 ...RQRALIRYLGLPLSITQLAEIVGGDHGNVARLIREFRERCDQLDPTGQLSHRIRAGARPAEDTP.....
A0A0D5V318_9BURK/358-416             lfa----FLPWLSQHRPLTHAAAEFGTSPEVIKAWVGRFRVWLLELDPSGRYEQRVRLGLK------vp...
Q8XUK9_RALSO/95-158                  ..s-AEELITMLPQAIGCPEAARRLGVMERTIRNTVRMFRRWVLELDPSGHHERHIRLGGRFTAVR-d....
B2JXE0_BURP8/108-171                 ..q-AGELIALLPQEISCAEAARQLGVMEHTVLETVRLVRRWLLELDASGHYEPGVRLGGRFTAAQP.....
B9JG85_AGRRK/49-110                  ...KLELFVRLLSQQRPITDAAEMIDVKVVTVIRWVKRMRQWIPELDPSGYWEARVRLGR-------hdals
Q63II2_BURPS/78-141                  ...RMRLVIRRLSLPLLVMQVADLVGTSHGMVRKWHSMFTDFADRLEPSGSLSARIRLRSNSANAP-n....
Q63IL9_BURPS/242-305                 ...RMRLFIRHLSLPLSVMQAADLVGTSHGIIHKWLRMFIEFADQLEPSGSLSARIQLGVEPTETTP.....
Q8Y104_RALSO/361-422                 ..a-LPHFIRLLSQQRPLHDAIDALKLDERIAKQWVGKFRSWLLQLDPSGHYEAMVRLGLKPAA---p....
A0A0D5V318_9BURK/102-163             ...KVPAFVRLLGQPIPLEEASRRLRVDYTALSNWLMRFRELIAQDDPDARWASRVLLGVK------yrpe.
Q8Y104_RALSO/102-164                 ...KMPAFIRLLSQQISLEEASFRLGLDVECISNWLARFRQLILLHDPSGQWESRVRLGIKFQF---sg...
Q63IL9_BURPS/94-157                  ...KLDLFVFLLSQPISCLEAGKQMGSLPDDIGQRVKVWRAWLLQLDPSGQWERRVRLGGRPTELNP.....
B2JXE0_BURP8/255-318                 ...RQRELIRYLGLPLPLAQLADMIDTDPAITARLVDEFRTRCAQLDPSGRLASRIRACVRPATDTP.....
B9TBN6_RICCO/8-59                    ...KQRELIRYLGLPLGVTQVAEILSTDPLSIRRWIRSFSRRCAQLDPSGDW---------------lag..
A0A0C4YGJ0_9BURK/97-160              ...KAEAFFNLASQQMSVAEAARRLGIKSETVRHWSIQTRLWLLTLDPQGDWERRVQLGVRYAV---lpa..
Q63II2_BURPS/1-32                    .mt----------------------------------AWRAWLLELDPSGKWERRVRLSHRPP----hcpn.
#=GC seq_cons                        ...+hcthIRhLuQ.lsltcAAchlGss.tslppWlppFRpalhpLDPSGcaEpRVRLGs+.s.........
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