GenomeNet

Database: Pfam
Entry: DUF848
LinkDB: DUF848
Original site: DUF848 
#=GF ID   DUF848
#=GF AC   PF05852.7
#=GF DE   Gammaherpesvirus protein of unknown function (DUF848)
#=GF AU   Moxon SJ
#=GF SE   Pfam-B_9475 (release 8.0)
#=GF GA   25.30 25.30;
#=GF TC   25.30 33.70;
#=GF NC   24.40 25.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR008566;
#=GF CC   This family consists of several uncharacterised proteins from
#=GF CC   the Gammaherpesvirinae.
#=GF SQ   29
#=GS Q1HVE5_EBVA8/4-141   AC Q1HVE5.1
#=GS Q8JJQ4_9GAMA/5-150   AC Q8JJQ4.1
#=GS Q80BP2_SHV2/1-147    AC Q80BP2.1
#=GS Q9YTN0_ATHV3/1-147   AC Q9YTN0.1
#=GS Q77NJ7_9GAMA/4-146   AC Q77NJ7.1
#=GS Q993I4_9GAMA/4-148   AC Q993I4.1
#=GS A1BM23_9GAMA/4-152   AC A1BM23.1
#=GS P88923_HHV8/4-147    AC P88923.1
#=GS Q2MG96_EBVB9/4-141   AC Q2MG96.1
#=GS Q9WRR6_9GAMA/4-146   AC Q9WRR6.1
#=GS Q9WI12_BHV4/3-151    AC Q9WI12.1
#=GS O41952_MHV68/4-149   AC O41952.1
#=GS Q9Q1U3_SHV2/1-115    AC Q9Q1U3.1
#=GS Q2VSK6_9GAMA/4-152   AC Q2VSK6.1
#=GS Q76RH5_HHV8/4-147    AC Q76RH5.1
#=GS U5NM07_HHV8/4-147    AC U5NM07.1
#=GS Q8B3Y7_9GAMA/5-145   AC Q8B3Y7.1
#=GS I1YP38_EBVG/4-141    AC I1YP38.1
#=GS Q8B3V8_9GAMA/5-150   AC Q8B3V8.1
#=GS UL96_ALHV1/3-152     AC O36384.1
#=GS UL96_EHV2/6-150      AC Q66639.1
#=GS UL96_SHV21/1-147     AC Q01024.1
#=GS G1EUJ1_BHV4/3-151    AC G1EUJ1.1
#=GS E9M5L9_9GAMA/17-162  AC E9M5L9.1
#=GS D0PPC4_MHV68/3-149   AC D0PPC4.1
#=GS D0U1M5_MHV68/3-149   AC D0U1M5.1
#=GS ORF35_HHV8P/4-147    AC F5HCD4.1
#=GS Q98130_HHV8/4-28     AC Q98130.1
#=GS Q53D07_9GAMA/4-146   AC Q53D07.1
Q1HVE5_EBVA8/4-141              ......s-SS.KRDLVAQQLRASVEKRAAVSARDRFGRDHALFETQFTSARGALESLRRARET.FESKQLISTYQRVVTATKTQFPK---.INYKQLERVEELREQELEARDELRQALEP..FEEH..GCE.YGCGvEPDE.....-----.......LLQQWRVECLPRTPS.
Q8JJQ4_9GAMA/5-150              ....vlt---.-KEHVLKNLEIAVNKQVSVSAADRFGKGNPLFRAQFQFTTNLIRNQQKRDHE.RSLQMKLYNLESQIRQKQSEIATLSS.IDIKKIDHLEKLTDRVDELRDTLEFELERqdIEDN..GGA.HDEL.SGLQ.....PDIDN.......IIVDWRLERLPKCP-q
Q80BP2_SHV2/1-147               ......m-NSnKKEFLYSAFETEINKKASVSLFDRFGGKSCIFLHQLDHTKKSLIKHENLKRQ.KSIEGMLQAVDTSIQEKRKELSLLKN.FNRHKLTAAEDLQDKILELKEDIHFEIES..LNNG..QPS.SQEEeNSSE.....TSVPD.......TIMQWRIEALPRVPS.
Q9YTN0_ATHV3/1-147              ......m-NSnRKKFLCSAFEAEINKKTSVSLFDRFGESNCLFLHQLDTTKKSLIKHENLKKQ.KSIEGMLQEVNLSIQEKKKELSLLKT.FDRHKLSDTEDLQDKISELTEDLQFEIEA..LNHG..QSS.SQEEeSSSE.....NTVTG.......TIMRWRIEALPRVPS.
Q77NJ7_9GAMA/4-146              .....aa--A.KKMLIKSELESEINKKLSISVFDRFGADSAVFNAQYKGTRESLRSYNSLKKK.DDLATVVGTLETSLREKQSELGLLKG.FNRKKIEEFDAVADAVRDLKDELYGELEI..LGTL..DNE.SV--.PVEE.....ESPKD.......DIIRWKLERLPRVCP.
Q993I4_9GAMA/4-148              .....ak--T.KRDLIAQQLRASIEKKVAVSTCDRFGEDHVLFHNQLLAAQESVRELNRTRSD.LELKSLVSDYKCILSRSRRLRGTLPI.INHRELELAEDFQDRLEETCSEIKEALAP..FKRD..GGE.HGNGyEFDE.....-QPAD.......IVERWRLEQLPSVP-k
A1BM23_9GAMA/4-152              ....yat---.TKEQIRLDIELAVQKRVAVSVADRFGTHSSLFRQQFEQTNCLGRRARKVEQL.QDIRNKVDSLHTEIANRSKEVEALLH.FDPKKVDALEALSERVDELKTDLDFEVDR..VQSL..QDE.QYAA.QSDTlpgrgRELED.......TLLQWRLERAPTC--g
P88923_HHV8/4-147               .......TNS.KREFIKSALEANINRRAAVSLFDRFGGSSAVFEKQFQDAQHAVRAHGALKRE.AELGTLVRKAGQRFEALKRERSILRQpRDLPRVADIDALVDAVADLKEEVAVRLDA..LEEN..GEE.TP--.THSS.....SEIKD.......TIVRWRLDDLPPVCP.
Q2MG96_EBVB9/4-141              ......s-SS.KRDLVAQQLRASVEKRAAVSARDRFGRDHALFETQFTSARGALESLRHARET.FESKQLISTYQRVVTATKTQFPK---.INYKQLERVEELREQELEARDELRQALEP..FEEH..GCE.YGCGvEPDE.....-----.......LLQQWRVECLPRTPS.
Q9WRR6_9GAMA/4-146              .....aa--A.KKMLIKSELESEINKKLSISVFDRFGADSAVFNAQYKGTRESLRSYNSLKKK.DDLATVVGTLETSLREKQSELGLLKG.FNRKKIEEFDAVADAVRDLKDELYGELEI..LGTL..DNE.SV--.PVEE.....ESPKD.......DIIRWKLERLPRVCP.
Q9WI12_BHV4/3-151               srnkkia---.--ELFKINLLSEVNKKTSVSLFDRFGEHSDIFLQQFEVTQKNLQDCNQLRQS.TKVDNIISFVESTIRSQEKQLETLLK.FDKKKLERAEALTNRVSDLSEDIQAELSF..LTSE..GGDgTNIShGSED.....DTTRD.......TIMHWRLGTIPDVPA.
O41952_MHV68/4-149              ...klla---.-KKLIGSSLRADIEKRAAVSLTDRFGKSHSLTQFQYTKAKRAERTASSAREHcHRIENMVS-TKRELSDCVSELTHLKEiCQNFSVEDAERLIEETTVLKEELEDTVNT..VSAA..LQR.EESL.SADS.....EQEES.......DITCWRLDGLPTVT-a
Q9Q1U3_SHV2/1-115               ......m-NSnKKEFLYSAFETEINKKASVSLFDRFGGKSCIFLHQLDHTKKSLIKHENLKRQ.KSIEGMLQAVDTSIQEKRKELSLLKN.FNRHKLTAAEDLQDKILELKEDIHFEIES..LNN-..---.----.----.....-----.......---------------g
Q2VSK6_9GAMA/4-152              ....yat---.TKEQIRLDIELAVQKRVAVSVADRFGTHSSLFRQQFEQTNCLGRRARKVEQL.QDIRNKVDSLHTEIANRSKEVEALLH.FDPKKVDALEALSERVEELKTDLDFEVDR..VQSL..QDE.QYAA.QSDTlpgrgRELED.......TLVQWRLERAPTC--g
Q76RH5_HHV8/4-147               .......TNS.KREFIKSALEANINRRAAVSLFDRFGGSSAVFEKQFQDAQHAVRAHGALKRE.AELGTLVRKAGQRFEALKRERSILRQpRDLPRVADIDALVDAVADLKEEVAVRLDA..LEEN..GEE.TP--.THSS.....SEIKD.......TIVRWRLDDLPPVCP.
U5NM07_HHV8/4-147               ......r-NT.KRDFIKSALTVDVQRKTAVSLFDRFGAGSAIFERQFIDARAAERSHGTLQRQ.TKLRDLAREVHQKFENAKKERVALGDhRALPSTEEIDALGDTVADLKETVTARLDA..LEEH..GVD.CPGD.GTE-.....-EVQD.......TILHWRLGRLPPMCP.
Q8B3Y7_9GAMA/5-145              ....pln---.-KQLLLKNLEIAVNKQVTVSTCDRFGKDNSLFKAQFQFTTDLIKAQQHRESE.SHFQKKVAGLDSRIKQKQSEISSLSS.VDLRKFSYLEKLTERVEELKDILEVELPD..DGGI..QDE.LS--.-GVQ.....SDVDN.......VILNWRLEAMPRCP-t
I1YP38_EBVG/4-141               ......s-SS.KRDLVAQQLRASVEKRAAVSARDRFGRDHALFETQFTSARGALESLRRARET.FESKQLISTYQRVVTATKTQFPK---.INYKQLERVEELREQELEARDELRQALEP..FEEH..GCE.YGCGvEPDE.....-----.......LLQQWRVECLPRTPS.
Q8B3V8_9GAMA/5-150              ....vlt---.-KEQVLKNLEIAVNKQVSVSAADRFGKGNSLFRAQFQFTTNLIRNQQKRDHE.RSLQMKLCSLESQIRQKQSEIATLSS.IDLKKIVHLEKLTDRADELRDTLEFELERqaIEEN..GGA.RDEL.SGLQ.....PDIDN.......IIVDWRLERLPKCP-q
UL96_ALHV1/3-152                ......p-QS.MKEQIRLDIELAVQRRVAVSVGDRFGTQSALFRRQFDEANAVSHRVQQTERL.RAIKNKVVYLTTEIENRTKEVESLIR.FDPKKVDILEELTDKVEELEANVSFEVDR..IQGY..QER.YH--.GGQQ.....TSLPDcngeletTLTQWRLEQAPRCPP.
UL96_EHV2/6-150                 ......r-DQ.QRDLIARGLEAEVNKRAAVSLFDRFGPSNPLFKKQYADTRLSLRSYHSCSQT.ERVRASLELVNLTIETKNKERALLSK.LNRGAVARVEKLCDAVADLREEFDLELDS..LTAA..QDD.PVEG.GPEP.....ADVAD.......TITEWRAEALPSVPA.
UL96_SHV21/1-147                ......m-NSnKKEFLYSAFETEINKKASVSLFDRFGGKSCIFLHQLDHTKKSLIKHENLKRQ.KSIEGMLQAVDTSIQEKRKELSLLKA.FNRHKLTAAEDLQDKILELKEDIHFEIES..LNNG..QPS.SQEEeNSSE.....TSIPD.......TIMQWRIEALPRVPS.
G1EUJ1_BHV4/3-151               srnkkia---.--ELFKINLLSEVNKKTSVSLFDRFGEHSDIFLQQFEVTQKNLQDCNQLRQS.TKVDNIISFVESTIRSQETQLETLLK.FDKKKLERVEALTNRVSDLSEDIQAELSF..LTSE..GGDgTNIShGSED.....DTTRD.......TIMHWRLGTIPDVPA.
E9M5L9_9GAMA/17-162             ...ktvl---.-KRLIGTAFKSGVEKKTAVSVYDRFGPQNPLFVAQYSCAKGAEAELSKSREL.YDSAQLSNSLHKALSHKKQELAHLRA.CAKISVGELEKLTDDIFEARENIEDISSY..LLNS..EGE.SPEDlNQQH.....GNCTD.......DILQWRIDEIPSVP-r
D0PPC4_MHV68/3-149              ...tkql---.AKKLIGTSLRADIEKRAAVSLTDRFGKSHSLTQLQYSRAKRAERGISSVREH.CNRLENMVSAKRELSECMTELTHLKGvCQNFSVEDAEKLIEETTVLKEELEDTVNA..VSTAlqKEE.YLLT.EPGQ.....--EDS.......DILCWRLDGLPTVT-a
D0U1M5_MHV68/3-149              ...tkql---.AKKLIGTSLRADIEKRAAVSLTDRFGKSHSLTQFQYSRAKRAERGISSVREH.CNRLENMVSAKRELSECMTELTHLKGvCQNFSVEDAEKLIEETTVLKEELEDTVNA..VSTA..LQK.EESL.LTEP.....GQEDS.......DILCWRLDGLPTVT-a
ORF35_HHV8P/4-147               .......TNS.KREFIKSALEANINRRAAVSLFDRFGGSSAVFEKQFQDAQHAVRAHGALKRE.AELGTLVRKAGQRFEALKRERSILRQpRDLPRVADIDALVDAVADLKEEVAVRLDA..LEEN..GEE.TP--.THSS.....SEIKD.......TIVRWRLDDLPPVCP.
Q98130_HHV8/4-28                .......TNS.KREFIKSALEANINRRAAVSLF------------------------------.--------------------------.-----------------------------..----..---.----.----.....-----.......---------------.
Q53D07_9GAMA/4-146              .....at--A.KKLLIKSELESEINKKLSISVFDRFGADSAVFNAQYKGTRESLRSYDSLKKK.DNLATVVGTLETSLREKQSELGLLKG.FNRKKIEEFDAVTDAVRDLKDELYGELEI..LGTL..NDE.SV--.PVEE.....ESPKD.......HIIRWKLERLPRVCP.
#=GC seq_cons                   ......h..t.p+-hltpsLEuslpK+suVSlhDRFGtssulFppQappsppul+shpph+cp.pclpshlsslcpplpppppElshLpt.hsh++lpchEtLp-plt-L+--lphcl-t..lpst..ts-.ps...sspp.....tp.ps.......sIhpWRL-pLPpss..
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