GenomeNet

Database: Pfam
Entry: DUF848
LinkDB: DUF848
Original site: DUF848 
#=GF ID   DUF848
#=GF AC   PF05852.6
#=GF DE   Gammaherpesvirus protein of unknown function (DUF848)
#=GF AU   Moxon SJ
#=GF SE   Pfam-B_9475 (release 8.0)
#=GF GA   24.30 24.30;
#=GF TC   25.10 28.60;
#=GF NC   24.20 24.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR008566;
#=GF CC   This family consists of several uncharacterised proteins from
#=GF CC   the Gammaherpesvirinae.
#=GF SQ   27
#=GS E9M5L9_9GAMA/16-162  AC E9M5L9.1
#=GS UL96_ALHV1/2-152     AC O36384.1
#=GS Q80BP2_SHV2/1-147    AC Q80BP2.1
#=GS Q9YTN0_ATHV3/1-147   AC Q9YTN0.1
#=GS Q8B3Y7_9GAMA/3-145   AC Q8B3Y7.1
#=GS P88923_HHV8/3-147    AC P88923.1
#=GS Q98130_HHV8/3-28     AC Q98130.1
#=GS Q9Q1U3_SHV2/1-115    AC Q9Q1U3.1
#=GS Q2MG96_EBVB9/3-141   AC Q2MG96.1
#=GS Q8B3V8_9GAMA/3-150   AC Q8B3V8.1
#=GS Q993I4_9GAMA/3-148   AC Q993I4.1
#=GS G1EUJ1_BHV4/4-151    AC G1EUJ1.1
#=GS Q53D07_9GAMA/3-146   AC Q53D07.1
#=GS Q77NJ7_9GAMA/3-146   AC Q77NJ7.1
#=GS Q8JJQ4_9GAMA/3-150   AC Q8JJQ4.1
#=GS F5HCD4_HHV8P/3-147   AC F5HCD4.1
#=GS Q2VSK6_9GAMA/3-153   AC Q2VSK6.1
#=GS Q1HVE5_EBVA8/3-141   AC Q1HVE5.1
#=GS UL96_EHV2/5-150      AC Q66639.1
#=GS UL96_SHV21/1-147     AC Q01024.1
#=GS Q9WRR6_9GAMA/3-146   AC Q9WRR6.1
#=GS Q9WI12_BHV4/4-151    AC Q9WI12.1
#=GS O41952_MHV68/3-149   AC O41952.1
#=GS D0PPC4_MHV68/3-149   AC D0PPC4.1
#=GS D0U1M5_MHV68/3-149   AC D0U1M5.1
#=GS Q76RH5_HHV8/3-147    AC Q76RH5.1
#=GS A1BM23_9GAMA/3-153   AC A1BM23.1
E9M5L9_9GAMA/16-162             hktv----LKRLIGTAFKSGVEKKTAVSVYDRFGPQNPLFVAQYSCAKGAEAELSKSRELYDSAQLSNSLHKALSHKKQELAHLRA.CAKISVGELEKLTDDIFEARENIEDISSYLLNS....eGESPEDLNQQHGNCTDDILQWRIDEIPSVP-r.
UL96_ALHV1/2-152                ...n-PQSMKEQIRLDIELAVQRRVAVSVGDRFGTQSALFRRQFDEANAVSHRVQQTERLRAIKNKVVYLTTEIENRTKEVESLIR.FDPKKVDILEELTDKVEELEANVSFEVDRIQGYqeryhGGQQTSLPDCNGELETTLTQWRLEQAPRCPP..
Q80BP2_SHV2/1-147               ....MNSNKKEFLYSAFETEINKKASVSLFDRFGGKSCIFLHQLDHTKKSLIKHENLKRQKSIEGMLQAVDTSIQEKRKELSLLKN.FNRHKLTAAEDLQDKILELKEDIHFEIESLNNG....qPSSQEEENSSETSVPDTIMQWRIEALPRVPS..
Q9YTN0_ATHV3/1-147              ....MNSNRKKFLCSAFEAEINKKTSVSLFDRFGESNCLFLHQLDTTKKSLIKHENLKKQKSIEGMLQEVNLSIQEKKKELSLLKT.FDRHKLSDTEDLQDKISELTEDLQFEIEALNHG....qSSSQEEESSSENTVTGTIMRWRIEALPRVPS..
Q8B3Y7_9GAMA/3-145              ..ra--PLNKQLLLKNLEIAVNKQVTVSTCDRFGKDNSLFKAQFQFTTDLIKAQQHRESESHFQKKVAGLDSRIKQKQSEISSLSS.VDLRKFSYLEKLTERVEELKDILEVELPDD---.....GGIQDELSGVQSDVDNVILNWRLEAMPRCPT..
P88923_HHV8/3-147               ...s-TNSKREFIKSALEANINRRAAVSLFDRFGGSSAVFEKQFQDAQHAVRAHGALKREAELGTLVRKAGQRFEALKRERSILRQpRDLPRVADIDALVDAVADLKEEVAVRLDALE--.....ENGEETPTHSSSEIKDTIVRWRLDDLPPVCP..
Q98130_HHV8/3-28                ...s-TNSKREFIKSALEANINRRAAVSLF--------------------------------------------------------.---------------------------------.....-------------------------------..
Q9Q1U3_SHV2/1-115               ....MNSNKKEFLYSAFETEINKKASVSLFDRFGGKSCIFLHQLDHTKKSLIKHENLKRQKSIEGMLQAVDTSIQEKRKELSLLKN.FNRHKLTAAEDLQDKILELKEDIHFEIESLN--.....-------------------------------ng
Q2MG96_EBVB9/3-141              ...m-SSSKRDLVAQQLRASVEKRAAVSARDRFGRDHALFETQFTSARGALESLRHARETFESKQLISTYQRVVTATKTQFPK---.INYKQLERVEELREQELEARDELRQALEPFE--.....--EHGCEYGCGVEPDELLQQWRVECLPRTPS..
Q8B3V8_9GAMA/3-150              .gpv---LTKEQVLKNLEIAVNKQVSVSAADRFGKGNSLFRAQFQFTTNLIRNQQKRDHERSLQMKLCSLESQIRQKQSEIATLSS.IDLKKIVHLEKLTDRADELRDTLEFELERQAIEe...nGGARDELSGLQPDIDNIIVDWRLERLPKCPQ..
Q993I4_9GAMA/3-148              ...t-AKTKRDLIAQQLRASIEKKVAVSTCDRFGEDHVLFHNQLLAAQESVRELNRTRSDLELKSLVSDYKCILSRSRRLRGTLPI.INHRELELAEDFQDRLEETCSEIKEALAPFKRD.....GGEHGNGYEFDEQPADIVERWRLEQLPSVPK..
G1EUJ1_BHV4/4-151               ...r-NKKIAELFKINLLSEVNKKTSVSLFDRFGEHSDIFLQQFEVTQKNLQDCNQLRQSTKVDNIISFVESTIRSQETQLETLLK.FDKKKLERVEALTNRVSDLSEDIQAELSFLTSEg...gDGTNISHGSEDDTTRDTIMHWRLGTIPDVPA..
Q53D07_9GAMA/3-146              ...s-ATAKKLLIKSELESEINKKLSISVFDRFGADSAVFNAQYKGTRESLRSYDSLKKKDNLATVVGTLETSLREKQSELGLLKG.FNRKKIEEFDAVTDAVRDLKDELYGELEILG--.....TLNDESVPVEEESPKDHIIRWKLERLPRVCP..
Q77NJ7_9GAMA/3-146              ...s-AAAKKMLIKSELESEINKKLSISVFDRFGADSAVFNAQYKGTRESLRSYNSLKKKDDLATVVGTLETSLREKQSELGLLKG.FNRKKIEEFDAVADAVRDLKDELYGELEILG--.....TLDNESVPVEEESPKDDIIRWKLERLPRVCP..
Q8JJQ4_9GAMA/3-150              .gpv---LTKEHVLKNLEIAVNKQVSVSAADRFGKGNPLFRAQFQFTTNLIRNQQKRDHERSLQMKLYNLESQIRQKQSEIATLSS.IDIKKIDHLEKLTDRVDELRDTLEFELERQDIEd...nGGAHDELSGLQPDIDNIIVDWRLERLPKCPQ..
F5HCD4_HHV8P/3-147              ...s-TNSKREFIKSALEANINRRAAVSLFDRFGGSSAVFEKQFQDAQHAVRAHGALKREAELGTLVRKAGQRFEALKRERSILRQpRDLPRVADIDALVDAVADLKEEVAVRLDALE--.....ENGEETPTHSSSEIKDTIVRWRLDDLPPVCP..
Q2VSK6_9GAMA/3-153              ..ly--ATTKEQIRLDIELAVQKRVAVSVADRFGTHSSLFRQQFEQTNCLGRRARKVEQLQDIRNKVDSLHTEIANRSKEVEALLH.FDPKKVDALEALSERVEELKTDLDFEVDRVQSLqdeqyAAQSDTLPGRGRELEDTLVQWRLERAPTCG-l.
Q1HVE5_EBVA8/3-141              ...m-SSSKRDLVAQQLRASVEKRAAVSARDRFGRDHALFETQFTSARGALESLRRARETFESKQLISTYQRVVTATKTQFPK---.INYKQLERVEELREQELEARDELRQALEPFE--.....--EHGCEYGCGVEPDELLQQWRVECLPRTPS..
UL96_EHV2/5-150                 ...s-RDQQRDLIARGLEAEVNKRAAVSLFDRFGPSNPLFKKQYADTRLSLRSYHSCSQTERVRASLELVNLTIETKNKERALLSK.LNRGAVARVEKLCDAVADLREEFDLELDSLTAA.....QDDPVEGGPEPADVADTITEWRAEALPSVPA..
UL96_SHV21/1-147                ....MNSNKKEFLYSAFETEINKKASVSLFDRFGGKSCIFLHQLDHTKKSLIKHENLKRQKSIEGMLQAVDTSIQEKRKELSLLKA.FNRHKLTAAEDLQDKILELKEDIHFEIESLNNG....qPSSQEEENSSETSIPDTIMQWRIEALPRVPS..
Q9WRR6_9GAMA/3-146              ...s-AAAKKMLIKSELESEINKKLSISVFDRFGADSAVFNAQYKGTRESLRSYNSLKKKDDLATVVGTLETSLREKQSELGLLKG.FNRKKIEEFDAVADAVRDLKDELYGELEILG--.....TLDNESVPVEEESPKDDIIRWKLERLPRVCP..
Q9WI12_BHV4/4-151               ...r-NKKIAELFKINLLSEVNKKTSVSLFDRFGEHSDIFLQQFEVTQKNLQDCNQLRQSTKVDNIISFVESTIRSQEKQLETLLK.FDKKKLERAEALTNRVSDLSEDIQAELSFLTSEg...gDGTNISHGSEDDTTRDTIMHWRLGTIPDVPA..
O41952_MHV68/3-149              .tkl---LAKKLIGSSLRADIEKRAAVSLTDRFGKSHSLTQFQYTKAKRAERTASSAREHCHRIENMVSTKRELSDCVSELTHLKEiCQNFSVEDAERLIEETTVLKEELEDTVNTVSAA.....LQREESLSADSEQEESDITCWRLDGLPTVT-a.
D0PPC4_MHV68/3-149              ...t-KQLAKKLIGTSLRADIEKRAAVSLTDRFGKSHSLTQLQYSRAKRAERGISSVREHCNRLENMVSAKRELSECMTELTHLKGvCQNFSVEDAEKLIEETTVLKEELEDTVNAVSTA.....LQKEEYLLTEPGQEDSDILCWRLDGLPTVT-a.
D0U1M5_MHV68/3-149              ...t-KQLAKKLIGTSLRADIEKRAAVSLTDRFGKSHSLTQFQYSRAKRAERGISSVREHCNRLENMVSAKRELSECMTELTHLKGvCQNFSVEDAEKLIEETTVLKEELEDTVNAVSTA.....LQKEESLLTEPGQEDSDILCWRLDGLPTVT-a.
Q76RH5_HHV8/3-147               ...s-TNSKREFIKSALEANINRRAAVSLFDRFGGSSAVFEKQFQDAQHAVRAHGALKREAELGTLVRKAGQRFEALKRERSILRQpRDLPRVADIDALVDAVADLKEEVAVRLDALE--.....ENGEETPTHSSSEIKDTIVRWRLDDLPPVCP..
A1BM23_9GAMA/3-153              ..ly--ATTKEQIRLDIELAVQKRVAVSVADRFGTHSSLFRQQFEQTNCLGRRARKVEQLQDIRNKVDSLHTEIANRSKEVEALLH.FDPKKVDALEALSERVDELKTDLDFEVDRVQSLqdeqyAAQSDTLPGRGRELEDTLLQWRLERAPTCG-l.
#=GC seq_cons                   .....ssspK-hltpsLEuslNK+suVSlhDRFGtssslFptQappspcul+shpph+cpppltshlsslcpplpppppElshLpt.hsh++lpchEtLp-clt-L+--lphcl-tlp.......ttpp-shssppsp.c-sIhpWRL-pLPpVs...
//
DBGET integrated database retrieval system