GenomeNet

Database: Pfam
Entry: DUF848
LinkDB: DUF848
Original site: DUF848 
#=GF ID   DUF848
#=GF AC   PF05852.9
#=GF DE   Gammaherpesvirus protein of unknown function (DUF848)
#=GF AU   Moxon SJ
#=GF SE   Pfam-B_9475 (release 8.0)
#=GF GA   25.30 25.30;
#=GF TC   169.60 169.30;
#=GF NC   24.60 24.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 17690987 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR008566;
#=GF CC   This family consists of several uncharacterised proteins from
#=GF CC   the Gammaherpesvirinae.
#=GF SQ   6
#=GS Q2MG96_EBVB9/4-141  AC Q2MG96.1
#=GS Q1HVE5_EBVA8/4-141  AC Q1HVE5.1
#=GS ORF35_HHV8P/4-147   AC F5HCD4.1
#=GS UL96_ALHV1/3-152    AC O36384.1
#=GS UL96_EHV2/6-150     AC Q66639.1
#=GS UL96_SHV21/1-147    AC Q01024.1
Q2MG96_EBVB9/4-141             s-SS.KRDLVAQQLRASVEKRAAVSARDRFGRDHALFETQFTSARGALESLRHARETFESKQLISTYQRVVTATKTQFPK---.INYKQLERVEELREQELEARDELRQALEPFEEHGCEYGCGvEPDE-----.......LLQQWRVECLPRTPS
Q1HVE5_EBVA8/4-141             s-SS.KRDLVAQQLRASVEKRAAVSARDRFGRDHALFETQFTSARGALESLRRARETFESKQLISTYQRVVTATKTQFPK---.INYKQLERVEELREQELEARDELRQALEPFEEHGCEYGCGvEPDE-----.......LLQQWRVECLPRTPS
ORF35_HHV8P/4-147              .TNS.KREFIKSALEANINRRAAVSLFDRFGGSSAVFEKQFQDAQHAVRAHGALKREAELGTLVRKAGQRFEALKRERSILRQpRDLPRVADIDALVDAVADLKEEVAVRLDALEENGEETP--.THSSSEIKD.......TIVRWRLDDLPPVCP
UL96_ALHV1/3-152               p-QS.MKEQIRLDIELAVQRRVAVSVGDRFGTQSALFRRQFDEANAVSHRVQQTERLRAIKNKVVYLTTEIENRTKEVESLIR.FDPKKVDILEELTDKVEELEANVSFEVDRIQGYQERYH--.GGQQTSLPDcngeletTLTQWRLEQAPRCPP
UL96_EHV2/6-150                r-DQ.QRDLIARGLEAEVNKRAAVSLFDRFGPSNPLFKKQYADTRLSLRSYHSCSQTERVRASLELVNLTIETKNKERALLSK.LNRGAVARVEKLCDAVADLREEFDLELDSLTAAQDDPVEG.GPEPADVAD.......TITEWRAEALPSVPA
UL96_SHV21/1-147               m-NSnKKEFLYSAFETEINKKASVSLFDRFGGKSCIFLHQLDHTKKSLIKHENLKRQKSIEGMLQAVDTSIQEKRKELSLLKA.FNRHKLTAAEDLQDKILELKEDIHFEIESLNNGQPSSQEEeNSSETSIPD.......TIMQWRIEALPRVPS
#=GC seq_cons                  ..sS.KR-hltpsLEAsVpKRAAVSlhDRFGsssALFc+QFscA+tuLcuhcps+cptcl+shlpthspslpsp++EhshL.t.hNh+plsclE-LpDplhEL+-ElchcL-slpptts-hspt.ssspspl.D.......TlpQWRlEsLPRsPu
//
DBGET integrated database retrieval system