GenomeNet

Database: Pfam
Entry: Erythro-docking
LinkDB: Erythro-docking
Original site: Erythro-docking 
#=GF ID   Erythro-docking
#=GF AC   PF09277.15
#=GF DE   Erythronolide synthase, docking
#=GF AU   Sammut SJ;0000-0003-4472-904X
#=GF SE   pdb_1pzq
#=GF GA   24.60 24.60;
#=GF TC   24.60 24.60;
#=GF NC   24.50 24.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   12954331
#=GF RT   The structure of docking domains in modular polyketide
#=GF RT   synthases. 
#=GF RA   Broadhurst RW, Nietlispach D, Wheatcroft MP, Leadlay PF,
#=GF RA   Weissman KJ; 
#=GF RL   Chem Biol. 2003;10:723-731.
#=GF DR   INTERPRO; IPR015357;
#=GF DR   SCOP; 1pzq; fa;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   Members of this family of docking domains are found in
#=GF CC   prokaryotic erythronolide synthase. They adopt a structure
#=GF CC   consisting of a bundle of four alpha-helices, and mediate
#=GF CC   homodimerisation of the protein, stabilising the resulting
#=GF CC   complex [1].
#=GF SQ   32
#=GS A0A7K2QJ56_9ACTN/130-196    AC A0A7K2QJ56.1
#=GS A0A291Q3Y1_9ACTN/4591-4648  AC A0A291Q3Y1.1
#=GS A4F7P0_SACEN/3490-3547      AC A4F7P0.1
#=GS A0A4R4XWS4_9ACTN/3387-3438  AC A0A4R4XWS4.1
#=GS A0A1V2RCB5_9ACTN/563-618    AC A0A1V2RCB5.1
#=GS A0A6H0CIY9_9ACTN/1740-1794  AC A0A6H0CIY9.1
#=GS A0A5R8YGV0_9ACTN/302-353    AC A0A5R8YGV0.1
#=GS A0A0B5EP70_STRA4/3295-3349  AC A0A0B5EP70.1
#=GS A0A7W9Q0Q1_9ACTN/1750-1800  AC A0A7W9Q0Q1.1
#=GS A0A1Q5GIQ8_9ACTN/1868-1914  AC A0A1Q5GIQ8.1
#=GS S3B9T2_9ACTN/2268-2321      AC S3B9T2.1
#=GS G2NJK5_STREK/1736-1782      AC G2NJK5.1
#=GS A0A0M8VK74_9ACTN/1741-1791  AC A0A0M8VK74.1
#=GS M3BYW5_STRMB/1218-1277      AC M3BYW5.1
#=GS H2JPR6_STRHJ/1763-1815      AC H2JPR6.1
#=GS A0A286EAV7_9ACTN/223-281    AC A0A286EAV7.1
#=GS A0A117Q5E5_9ACTN/1740-1789  AC A0A117Q5E5.1
#=GS A0A561UQ39_9ACTN/1728-1774  AC A0A561UQ39.1
#=GS A0A4P6UCF9_9NOCA/3525-3581  AC A0A4P6UCF9.1
#=GS A0A810ND78_9ACTN/827-878    AC A0A810ND78.1
#=GS A0A0F0HIL7_9PSEU/1750-1799  AC A0A0F0HIL7.1
#=GS A0A3G2JK27_9ACTN/1780-1831  AC A0A3G2JK27.1
#=GS A0A7W7QY86_KITKI/1747-1795  AC A0A7W7QY86.1
#=GS A0A7W7VAU5_9ACTN/4001-4058  AC A0A7W7VAU5.1
#=GS V6L516_STRRC/93-143         AC V6L516.1
#=GS A0A4Q7KHF7_9PSEU/3329-3381  AC A0A4Q7KHF7.1
#=GS A0A6G2VJI4_9ACTN/112-163    AC A0A6G2VJI4.1
#=GS A0A0F0HH81_9PSEU/451-507    AC A0A0F0HH81.1
#=GS A0A345I2F4_9ACTN/205-258    AC A0A345I2F4.1
#=GS A0A286EAE2_9ACTN/2531-2586  AC A0A286EAE2.1
#=GS D5ZU00_STRV1/129-185        AC D5ZU00.1
#=GS A0A2V4N3V6_9ACTN/1-59       AC A0A2V4N3V6.1
A0A7K2QJ56_9ACTN/130-196               .......tha-------VTEVLDQLDAAL.AA...V.A-.-QG.....A.ADparITARLEAVLRRWQDT..RTTEPA-------gpeqdfeavtddelfeald
A0A291Q3Y1_9ACTN/4591-4648             ........qg---PAVTVAAEIDRLAAAL.AA...G.PSgPEE.....H.AE...VGARLAELLRSWQSG..GAADDDLSSATDD...................
A4F7P0_SACEN/3490-3547                 ..........AASPAVDIGDRLDELEKAL.EA...L.SA.EDG.....H.DD...VGQRLESLLRRWNSR..RADAPSTSAISED...................
A0A4R4XWS4_9ACTN/3387-3438             .......pvl---------AEVDRLEAAL.SA...A.AA.AGG....dH.TR...ITARLEALLRSWQDR..EDGGTEP------epdsg..............
A0A1V2RCB5_9ACTN/563-618               ..saakpvlg----------QLAELEAAL.GA...LePD.EST.....R.ED...VAKRLQNLLWRWNES..ASPAPSS------gvdgd..............
A0A6H0CIY9_9ACTN/1740-1794             .......sal---------AELDRLEATL.HA...L.PD.QDG....sH.AR...VTARLEALLRDWQDThgRPAAPGT------padvgd.............
A0A5R8YGV0_9ACTN/302-353               ......sasp-------VFAELDALETAL.ENcdvM.GD.ESG.....-.-R...ITARLEALLRRWQDS..R------------vmggiaat...........
A0A0B5EP70_STRA4/3295-3349             .....deaaa-------VLADLDRLESAL.TA...L.PA.EDG.....R.RD..rIGARLRSLLTRWQD-..-------------gerggagaepaq.......
A0A7W9Q0Q1_9ACTN/1750-1800             .......ala----------GLDRLEADL.HA...L.PD.QDG....sH.AR...VTARLEALLRGWQDT..HGRA---------ggpvpted...........
A0A1Q5GIQ8_9ACTN/1868-1914             ......sala----------DLDRLEAAL.LA...L.PD.RDG....sH.TR...VTARLEALLRGWYDA..R------------dthgrd.............
S3B9T2_9ACTN/2268-2321                 ...aepegdg------GLEEALDRLEERL.AA...A.PE.ETA.....H.DQ...VAARLRSLARRWEER..RGPAG--------dge................
G2NJK5_STREK/1736-1782                 .......lad-----------VDRVEAAL.LA...L.PD.EDG....sH.AR...VTARLEALLRGWQDA..RDAAPES------pq.................
A0A0M8VK74_9ACTN/1741-1791             .......ala----------GLDRLEATL.HD...L.PD.QDG....sH.AR...VTARLEALLRSWQDT..HGRHTAP------eaped..............
M3BYW5_STRMB/1218-1277                 .....qgpgr------SLTDRIDDLEAAL.LA...A.AG.GDGvpdreH.AD...VAARLDSLLRRWRDE..RGEEPRA------daht...............
H2JPR6_STRHJ/1763-1815                 .......sal---------AELDRLEAAL.HA...L.PD.QDG....sH.AR...VTARLEALLRGWQDS..HARPTGP------aspadv.............
A0A286EAV7_9ACTN/223-281               ..aapadhgr------EVRAGLDRLEAAL.EA...L.PR.EDG.....ArDE...AGTRLRSLLARLGGT..GADAPAA------tgst...............
A0A117Q5E5_9ACTN/1740-1789             ........al---------AELDRLEATL.HD...L.PD.QDG....sH.AR...VTARLEALLRSWQDT..H------------grhsapgape.........
A0A561UQ39_9ACTN/1728-1774             ......llva----------EVDRLETAL.AA...V.AD.QDG....sH.AR...ITARLEALLRTWR--..-------------dahgtggta..........
A0A4P6UCF9_9NOCA/3525-3581             .....stssk------GIDDRLDELDRAL.EA...L.PE.DER.....D.ED...IANRLESMLRRWNAK..RAPGPDAPVIDDD...................
A0A810ND78_9ACTN/827-878               ....satpli---------AEIDRLDRGL.RA...L.PP.DGD.....H.TE...ITRRLEDLLARWSGR..RPT----------tipaprr............
A0A0F0HIL7_9PSEU/1750-1799             .....rlmva----------EVDRLEAAL.TA...L.PD.QDG....sH.AR...ITARLEALLRTWRD-..-------------thgsagaaea.........
A0A3G2JK27_9ACTN/1780-1831             .......tal---------AELDRLEAAL.LT...L.PD.EGG....sH.AR...VTARLEALLRSWQDT..HGRHPAPVA----ped................
A0A7W7QY86_KITKI/1747-1795             .....rlmva----------EVDRLEAAL.TA...L.PD.QDG....sH.AR...ITARLEALLRTWRD-..-------------thstggeap..........
A0A7W7VAU5_9ACTN/4001-4058             .........e-AEPDTGVLDQLDRLERAL.FD...L.AD.DGT.....A.TK...VDLRLRALLAKWSDT..RADATDEEADSGD...................
V6L516_STRRC/93-143                    ........al---------AELDRLETAL.HG...L.PD.QDG....sH.AR...VTARLEALLRSWQDThgRHPAPE-------apad...............
A0A4Q7KHF7_9PSEU/3329-3381             ........gd---PAQPVLAEVDRLESAL.AA...A.TD.LNG....dH.AR...VTARLEALLRRWRDQ..-------------etqgndga...........
A0A6G2VJI4_9ACTN/112-163               ......sala----------EVDRLEAAL.HA...L.PD.QDG....sH.TR...VTARLEALLRSWQDA..HGRHSE-------pesped.............
A0A0F0HH81_9PSEU/451-507               ...adavvpl--------LAELDRLEAALaDT...A.PD.DEG.....H.LR...VANRLQSLLAKWNDQ..QVPAENA------avaee..............
A0A345I2F4_9ACTN/205-258               ........pg---PESGVLDQLDRLESAL.RT...L.PD.DGT.....A.TK...VDLRLRALLARWGEA..RAGAV--------dedsg..............
A0A286EAE2_9ACTN/2531-2586             ....apsldt----------ELDRLESAL.SL...LtPD.DTR.....H.AD...IGARLRALLSRWDEThsRTEAAD-------tgtdar.............
D5ZU00_STRV1/129-185                   ....epdpva------PVLAELDRLERAL.GR...L.PV.V--.....-.DE...ISTRLHTLLRRWDER..SAPAEA-------galssasad..........
A0A2V4N3V6_9ACTN/1-59                  gadpsapllg----------EVDRLDAAL.AA...F.AP.TGG.....AaAK...ITARLEALLRKWQDL..QATDHDTDT----eadl...............
#=GC seq_cons                          ........st.........t-LDRLEuAL.tA...L.PD.psG.....H.s+...loARLEALLRpWpDp..+s.t.t.......stts...............
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