#=GF ID FIVAR
#=GF AC PF07554.8
#=GF DE Uncharacterised Sugar-binding Domain
#=GF AU Yeats C
#=GF SE Yeats C
#=GF GA 21.30 10.80;
#=GF TC 21.30 10.80;
#=GF NC 21.20 10.70;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF RN [1]
#=GF RM 12438356
#=GF RT Identification of a fibronectin-binding protein from
#=GF RT Staphylococcus epidermidis.
#=GF RA Williams RJ, Henderson B, Sharp LJ, Nair SP;
#=GF RL Infect Immun 2002;70:6805-6810.
#=GF RN [2]
#=GF RM 14759609
#=GF RT Posttranslational processing of polysaccharide lyase: maturation
#=GF RT route for gellan lyase in Bacillus sp. GL1.
#=GF RA Miyake O, Kobayashi E, Nankai H, Hashimoto W, Mikami B, Murata
#=GF RA K;
#=GF RL Arch Biochem Biophys 2004;422:211-220.
#=GF RN [3]
#=GF RM 10896508
#=GF RT Tn551-mediated insertional inactivation of the fmtB gene
#=GF RT encoding a cell wall-associated protein abolishes methicillin
#=GF RT resistance in Staphylococcus aureus.
#=GF RA Komatsuzawa H, Ohta K, Sugai M, Fujiwara T, Glanzmann P,
#=GF RA Berger-BachiB, Suginaka H;
#=GF RL J Antimicrob Chemother 2000;45:421-431.
#=GF DR INTERPRO; IPR011490;
#=GF CC This domain is found in a wide variety of contexts, but mostly
#=GF CC occurring in cell wall associated proteins. A lack of conserved
#=GF CC catalytic residues suggests that it is a binding domain. From
#=GF CC context, possible substrates are hyaluronate or fibronectin
#=GF CC (personal obs: C Yeats). This is further evidenced by [1].
#=GF CC Possibly the exact substrate is N-acetyl glucosamine. Finding it
#=GF CC in the same protein as Pfam:PF05089 further supports this
#=GF CC proposal. It is found in the C-terminal part of Swiss:O82833,
#=GF CC which is removed during maturation ([2]). Some of the proteins
#=GF CC it is found in (e.g. Swiss:Q9RL69) are involved in methicillin
#=GF CC resistance ([3]). The name FIVAR derives from Found In Various
#=GF CC Architectures.
#=GF SQ 12786
#=GS D6S6B0_9LACO/1879-1924 AC D6S6B0.1
#=GS D1QIH3_STAAU/5809-5859 AC D1QIH3.1
#=GS H3VSH7_STAEP/4059-4108 AC H3VSH7.1
#=GS F5LUZ6_GARVA/1527-1575 AC F5LUZ6.1
#=GS F3A0Q5_9BACL/1405-1448 AC F3A0Q5.1
#=GS Q9ZHR9_MYCGL/71-116 AC Q9ZHR9.1
#=GS B9CRZ9_STACP/3814-3857 AC B9CRZ9.1
#=GS C5QSI3_STAEP/3735-3784 AC C5QSI3.1
#=GS H3WGE9_STAEP/6661-6710 AC H3WGE9.1
#=GS EBHA_STAAN/1646-1696 AC Q99U54.1
#=GS F3TNQ7_STAEP/6158-6208 AC F3TNQ7.1
#=GS H4DZZ0_STAAU/9205-9251 AC H4DZZ0.1
#=GS D3FHD4_MYCGH/178-231 AC D3FHD4.1
#=GS B9CRZ9_STACP/2533-2581 AC B9CRZ9.1
#=GS H3XI03_STAAU/1971-2022 AC H3XI03.1
#=GS D1QIH3_STAAU/7446-7496 AC D1QIH3.1
#=GS E1NXP5_9LACO/303-349 AC E1NXP5.1
#=GS G6L2Q8_STRPN/408-454 AC G6L2Q8.1
#=GS D3EWH8_STAA4/2788-2836 AC D3EWH8.1
#=GS B5QQZ2_LACRH/1213-1270 AC B5QQZ2.1
#=GS H3TPX1_STAAU/6439-6489 AC H3TPX1.1
#=GS C5QSI5_STAEP/1043-1089 AC C5QSI5.1
#=GS H3XI04_STAAU/181-228 AC H3XI04.1
#=GS D1GUD2_STAA0/2788-2836 AC D1GUD2.1
#=GS F5WIF7_STAAU/2046-2096 AC F5WIF7.1
#=GS H3VCC2_STAEP/7415-7465 AC H3VCC2.1
#=GS H0C691_STAAU/949-999 AC H0C691.1
#=GS H0DYU7_STAEP/3946-3993 AC H0DYU7.1
#=GS A5LZ62_STRPN/1227-1275 AC A5LZ62.1
#=GS C5QX55_STAEP/2707-2755 AC C5QX55.1
#=GS F9L008_STAAU/2612-2662 AC F9L008.1
#=GS H0CXK6_STAAU/4050-4100 AC H0CXK6.1
#=GS D1WNI2_STAEP/9305-9353 AC D1WNI2.1
#=GS EBHA_STAA1/512-562 AC A7X2C3.1
#=GS H4ACZ4_STAAU/5557-5607 AC H4ACZ4.1
#=GS F3TZ37_STAEP/5114-5164 AC F3TZ37.1
#=GS H4CMW6_STAAU/4195-4243 AC H4CMW6.1
#=GS F3TZ37_STAEP/2096-2146 AC F3TZ37.1
#=GS D6SGX3_STAAU/2635-2685 AC D6SGX3.1
#=GS H0CF12_STAAU/8073-8123 AC H0CF12.1
#=GS E7MHI9_STAAU/7446-7496 AC E7MHI9.1
#=GS D2Q5S8_BIFDB/1717-1760 AC D2Q5S8.1
#=GS H4EX71_STAAU/2401-2451 AC H4EX71.1
#=GS D4FIP8_STAEP/2969-3041 AC D4FIP8.1
#=GS Q7NBE2_MYCGA/140-189 AC Q7NBE2.1
#=GS E8MFN9_BIFL2/1106-1164 AC E8MFN9.1
#=GS H4C706_STAAU/6183-6232 AC H4C706.1
#=GS F3UY47_STRSA/1045-1093 AC F3UY47.1
#=GS H3WCR2_STAEP/3215-3261 AC H3WCR2.1
#=GS H6LQ97_STAAU/7490-7540 AC H6LQ97.1
#=GS H3Y1X0_STAAU/2653-2703 AC H3Y1X0.1
#=GS D2GRI6_STAAU/3163-3213 AC D2GRI6.1
#=GS C8ABV9_STAAU/3151-3201 AC C8ABV9.1
#=GS H4E7H5_STAAU/6942-6992 AC H4E7H5.1
#=GS D6SGX4_STAAU/31-81 AC D6SGX4.1
#=GS H0D3U0_STAAU/832-882 AC H0D3U0.1
#=GS C5QSI3_STAEP/2601-2650 AC C5QSI3.1
#=GS I0NZQ8_STRPN/337-389 AC I0NZQ8.1
#=GS E6U966_ETHHY/1474-1525 AC E6U966.1
#=GS H1BPF3_9FIRM/1975-2028 AC H1BPF3.1
#=GS H4E7H5_STAAU/7824-7874 AC H4E7H5.1
#=GS F9KDL2_STAAU/2119-2169 AC F9KDL2.1
#=GS EBH_STAAW/3919-3969 AC Q8NWQ6.1
#=GS EBH_STAAW/3919-3969 DR PDB; 1XVH B; 11-61;
#=GS EBH_STAAW/3919-3969 DR PDB; 1XVH A; 11-61;
#=GS D2UM56_STAAU/1598-1648 AC D2UM56.1
#=GS C7TF98_LACRL/927-982 AC C7TF98.1
#=GS F9JU88_STAAU/4170-4220 AC F9JU88.1
#=GS H3UKE3_STAEP/1912-1957 AC H3UKE3.1
#=GS H0DMI5_STAEP/3784-3832 AC H0DMI5.1
#=GS F3TAV6_STAAU/4171-4221 AC F3TAV6.1
#=GS F9JS29_STAAU/4033-4083 AC F9JS29.1
#=GS F9KDL2_STAAU/1614-1664 AC F9KDL2.1
#=GS B1BZX6_9FIRM/743-787 AC B1BZX6.1
#=GS C0EAI8_9CLOT/1431-1479 AC C0EAI8.1
#=GS E7MV52_STAAU/9332-9383 AC E7MV52.1
#=GS D2GG79_STAAU/5175-5225 AC D2GG79.1
#=GS H7G1R4_STAA5/6184-6233 AC H7G1R4.1
#=GS D6T4S2_STAAU/9458-9509 AC D6T4S2.1
#=GS H3TPX1_STAAU/7321-7371 AC H3TPX1.1
#=GS H3Z5Y2_STAEP/3043-3091 AC H3Z5Y2.1
#=GS H4GGY5_STAAU/4423-4473 AC H4GGY5.1
#=GS H4B8W1_STAAU/4170-4220 AC H4B8W1.1
#=GS C8M380_STAAU/7572-7622 AC C8M380.1
#=GS D0DXJ3_9LACO/382-429 AC D0DXJ3.1
#=GS F9KGF4_STAAU/2703-2750 AC F9KGF4.1
#=GS H4A4Q8_STAAU/3288-3339 AC H4A4Q8.1
#=GS I0TIR4_STAAU/3920-3968 AC I0TIR4.1
#=GS H3V7M9_STAEP/2703-2751 AC H3V7M9.1
#=GS F9LLX0_STAEP/4774-4824 AC F9LLX0.1
#=GS EBH_STAA2/7824-7874 AC A6U1Q5.1
#=GS D1WCS0_9LACO/24-71 AC D1WCS0.1
#=GS EBH_STAA9/2788-2836 AC A5ISW6.1
#=GS EBH_STAA9/2618-2666 AC A5ISW6.1
#=GS G5JM28_9STAP/4057-4107 AC G5JM28.1
#=GS C8MKT1_STAAU/6690-6740 AC C8MKT1.1
#=GS F9KDL2_STAAU/5016-5066 AC F9KDL2.1
#=GS D4FIP8_STAEP/6318-6368 AC D4FIP8.1
#=GS D3EWH8_STAA4/6061-6111 AC D3EWH8.1
#=GS H4BH40_STAAU/7064-7114 AC H4BH40.1
#=GS F3ASS2_9FIRM/1016-1059 AC F3ASS2.1
#=GS F0DEP4_STAAU/1474-1524 AC F0DEP4.1
#=GS B6EFH1_CLODI/596-640 AC B6EFH1.1
#=GS C8M380_STAAU/5179-5229 AC C8M380.1
#=GS H0D3U0_STAAU/5501-5549 AC H0D3U0.1
#=GS G8RFQ9_STAAU/2788-2836 AC G8RFQ9.1
#=GS H4ACZ4_STAAU/7068-7118 AC H4ACZ4.1
#=GS I0C4E4_STAA5/8325-8375 AC I0C4E4.1
#=GS H7MP46_STRPN/475-518 AC H7MP46.1
#=GS H0DYU6_STAEP/1139-1188 AC H0DYU6.1
#=GS H4H017_STAAU/5049-5099 AC H4H017.1
#=GS D2FVC5_STAAU/4159-4209 AC D2FVC5.1
#=GS H4C706_STAAU/9327-9375 AC H4C706.1
#=GS D2Z041_CLOPF/1876-1922 AC D2Z041.1
#=GS EBHB_STAAM/2955-3002 AC Q99U53.1
#=GS G6KIJ2_STRPN/1203-1251 AC G6KIJ2.1
#=GS H7I067_STRPN/339-389 AC H7I067.1
#=GS EBH_STAAW/3793-3843 AC Q8NWQ6.1
#=GS B3DPW6_BIFLD/558-603 AC B3DPW6.1
#=GS D2FLX1_STAAU/3368-3418 AC D2FLX1.1
#=GS F1T5X4_9ACTN/780-825 AC F1T5X4.1
#=GS F9JU88_STAAU/7319-7369 AC F9JU88.1
#=GS H3XS15_STAAU/3541-3591 AC H3XS15.1
#=GS F9JU88_STAAU/6060-6110 AC F9JU88.1
#=GS H4DA92_STAAU/4801-4851 AC H4DA92.1
#=GS F9KR87_STAAU/3477-3527 AC F9KR87.1
#=GS H3X2M1_STAAU/6680-6730 AC H3X2M1.1
#=GS G8RFQ9_STAAU/4423-4473 AC G8RFQ9.1
#=GS C7T8K3_LACRG/1139-1195 AC C7T8K3.1
#=GS D2GRI6_STAAU/5306-5356 AC D2GRI6.1
#=GS H3XI04_STAAU/810-857 AC H3XI04.1
#=GS H0DYU7_STAEP/4953-5003 AC H0DYU7.1
#=GS H4AU37_STAAU/6312-6362 AC H4AU37.1
#=GS D1QXB9_STAAU/2955-3002 AC D1QXB9.1
#=GS D0DXT2_9LACO/126-175 AC D0DXT2.1
#=GS D4UH98_STAAU/8076-8126 AC D4UH98.1
#=GS G6MJF0_STRPN/475-518 AC G6MJF0.1
#=GS H0D3U0_STAAU/3490-3540 AC H0D3U0.1
#=GS E6EYL9_ENTFL/432-479 AC E6EYL9.1
#=GS C8M3D7_STAAU/3288-3339 AC C8M3D7.1
#=GS C8LVB0_STAAU/4901-4951 AC C8LVB0.1
#=GS B1C4V9_9FIRM/825-876 AC B1C4V9.1
#=GS H3W8R5_STAEP/5276-5327 AC H3W8R5.1
#=GS D0K511_STAAD/3290-3341 AC D0K511.1
#=GS F5W8V8_STAAU/3208-3258 AC F5W8V8.1
#=GS D9RH17_STAAJ/4424-4474 AC D9RH17.1
#=GS Q7NBR4_MYCGA/178-225 AC Q7NBR4.1
#=GS H0AWE0_STAAU/9080-9131 AC H0AWE0.1
#=GS H4HNY9_STAAU/3287-3338 AC H4HNY9.1
#=GS H0AFZ9_STAAU/9459-9507 AC H0AFZ9.1
#=GS E1NR99_9LACO/271-312 AC E1NR99.1
#=GS D2FLX1_STAAU/5005-5056 AC D2FLX1.1
#=GS D6HGT6_STAAU/5040-5090 AC D6HGT6.1
#=GS H3Z5Y2_STAEP/5781-5830 AC H3Z5Y2.1
#=GS F3TAV6_STAAU/2703-2750 AC F3TAV6.1
#=GS D6SXG1_GARVA/1875-1914 AC D6SXG1.1
#=GS EBHA_STAAE/1669-1719 AC A6QGY4.1
#=GS D1QIH3_STAAU/7068-7118 AC D1QIH3.1
#=GS D4QZD9_ENTFC/244-296 AC D4QZD9.1
#=GS H0CAY1_STAAU/1978-2025 AC H0CAY1.1
#=GS EBH_STAES/3352-3398 AC Q8CP76.1
#=GS C9YIP6_CLODR/860-904 AC C9YIP6.1
#=GS E5TX59_STAAU/2955-3002 AC E5TX59.1
#=GS H3UTM8_STAEP/3350-3398 AC H3UTM8.1
#=GS H1TKN3_STAAU/4171-4221 AC H1TKN3.1
#=GS D0K510_STAAD/3510-3560 AC D0K510.1
#=GS EBH_STAA9/6564-6614 AC A5ISW6.1
#=GS E6F989_ENTFL/1374-1417 AC E6F989.1
#=GS I0TSX8_STAAU/6187-6236 AC I0TSX8.1
#=GS H0CF12_STAAU/2529-2577 AC H0CF12.1
#=GS B8ZMP6_STRPJ/408-454 AC B8ZMP6.1
#=GS C8M3D7_STAAU/5053-5103 AC C8M3D7.1
#=GS H3XCJ3_STAAU/6061-6111 AC H3XCJ3.1
#=GS F5LUZ6_GARVA/1376-1416 AC F5LUZ6.1
#=GS E3BUU6_9LACO/559-609 AC E3BUU6.1
#=GS D3EWH8_STAA4/4549-4599 AC D3EWH8.1
#=GS E5T9W4_STAAU/385-435 AC E5T9W4.1
#=GS F9KGF4_STAAU/5935-5985 AC F9KGF4.1
#=GS F3LZ29_9LACO/477-524 AC F3LZ29.1
#=GS H4E7H5_STAAU/3162-3212 AC H4E7H5.1
#=GS D2US55_STAAU/2527-2577 AC D2US55.1
#=GS H3WNK3_STAEP/9385-9433 AC H3WNK3.1
#=GS D2GG79_STAAU/4923-4973 AC D2GG79.1
#=GS H3RXY8_STAAU/5935-5985 AC H3RXY8.1
#=GS E7MV52_STAAU/4801-4851 AC E7MV52.1
#=GS EBH_STAA3/9205-9253 AC Q2FH04.1
#=GS F9LQU4_STAEP/171-221 AC F9LQU4.1
#=GS D1QIH3_STAAU/4423-4473 AC D1QIH3.1
#=GS F9KDL2_STAAU/5898-5944 AC F9KDL2.1
#=GS H1BPF3_9FIRM/2061-2104 AC H1BPF3.1
#=GS D2GRI6_STAAU/6062-6112 AC D2GRI6.1
#=GS B6FVD4_9CLOT/2078-2122 AC B6FVD4.1
#=GS EBH_STAEQ/2081-2127 AC Q5HPA2.2
#=GS C5Q016_STAAU/8831-8881 AC C5Q016.1
#=GS D4EUP6_ENTFL/1444-1490 AC D4EUP6.1
#=GS E5QVY2_STAAH/5301-5351 AC E5QVY2.1
#=GS C5F730_LACPA/893-939 AC C5F730.1
#=GS H4CVJ3_STAAU/7064-7114 AC H4CVJ3.1
#=GS H4CVJ3_STAAU/4419-4469 AC H4CVJ3.1
#=GS EBHB_STAAE/4171-4221 AC A6QGY5.1
#=GS H4ACZ4_STAAU/3415-3465 AC H4ACZ4.1
#=GS A5KME8_9FIRM/1751-1798 AC A5KME8.1
#=GS C7VV12_ENTFL/1691-1738 AC C7VV12.1
#=GS H0DYU7_STAEP/2083-2131 AC H0DYU7.1
#=GS H3UBB0_STAAU/3707-3757 AC H3UBB0.1
#=GS B9CRZ9_STACP/7710-7759 AC B9CRZ9.1
#=GS H3V3M9_STAEP/3976-4024 AC H3V3M9.1
#=GS H0CXK6_STAAU/4554-4604 AC H0CXK6.1
#=GS E7FK76_BIFLN/1741-1792 AC E7FK76.1
#=GS H3RXY8_STAAU/4927-4977 AC H3RXY8.1
#=GS F9JS30_STAAU/3411-3461 AC F9JS30.1
#=GS Q9L8D5_MYCGL/88-133 AC Q9L8D5.1
#=GS H1TP31_STAAU/3919-3969 AC H1TP31.1
#=GS I0TIR4_STAAU/3750-3798 AC I0TIR4.1
#=GS C8MKT1_STAAU/8579-8629 AC C8MKT1.1
#=GS F5W8V7_STAAU/4286-4334 AC F5W8V7.1
#=GS D0K510_STAAD/1285-1335 AC D0K510.1
#=GS H3UKE2_STAEP/2139-2190 AC H3UKE2.1
#=GS D6UAI0_STAAU/2788-2836 AC D6UAI0.1
#=GS H0DBV6_STAAU/3148-3198 AC H0DBV6.1
#=GS D2FD40_STAAU/2527-2577 AC D2FD40.1
#=GS D0DQB0_9LACO/506-552 AC D0DQB0.1
#=GS H4CFT1_STAAU/1656-1706 AC H4CFT1.1
#=GS H4FZG4_STAAU/3288-3339 AC H4FZG4.1
#=GS C8AIB3_STAAU/3403-3453 AC C8AIB3.1
#=GS D1WNI2_STAEP/3976-4024 AC D1WNI2.1
#=GS F9LBC2_STAEP/6535-6584 AC F9LBC2.1
#=GS EBH_STAA8/3415-3465 AC Q2FYJ6.1
#=GS E6I9M1_ENTFL/1095-1139 AC E6I9M1.1
#=GS H3WCR2_STAEP/6410-6460 AC H3WCR2.1
#=GS H0AVY6_STAAU/260-310 AC H0AVY6.1
#=GS C8MKT1_STAAU/5809-5859 AC C8MKT1.1
#=GS E1ETD3_ENTFL/1237-1281 AC E1ETD3.1
#=GS H4DSU6_STAAU/6690-6740 AC H4DSU6.1
#=GS H4DZZ0_STAAU/5049-5099 AC H4DZZ0.1
#=GS Q7NAP2_MYCGA/178-231 AC Q7NAP2.1
#=GS D6HRF7_9FIRM/1785-1828 AC D6HRF7.1
#=GS E4R0Q8_BIFLM/1759-1802 AC E4R0Q8.1
#=GS C8L9I1_STAAU/1111-1161 AC C8L9I1.1
#=GS H4CFT1_STAAU/1405-1455 AC H4CFT1.1
#=GS H3TPX1_STAAU/4928-4978 AC H3TPX1.1
#=GS F3SRG4_STAWA/4003-4053 AC F3SRG4.1
#=GS F9KR87_STAAU/2595-2645 AC F9KR87.1
#=GS D1QXB9_STAAU/8328-8378 AC D1QXB9.1
#=GS F3A7G0_9BACL/899-943 AC F3A7G0.1
#=GS H3U392_STAAU/6311-6361 AC H3U392.1
#=GS H4BQQ4_STAAU/3541-3591 AC H4BQQ4.1
#=GS H3U392_STAAU/6941-6991 AC H3U392.1
#=GS G6TYE7_STRPN/1203-1251 AC G6TYE7.1
#=GS C7WIJ8_ENTFL/1233-1277 AC C7WIJ8.1
#=GS H3WCR2_STAEP/5781-5830 AC H3WCR2.1
#=GS EBH_STAA8/3162-3212 AC Q2FYJ6.1
#=GS G8RFQ9_STAAU/6942-6992 AC G8RFQ9.1
#=GS H1SJN2_STAAU/3792-3842 AC H1SJN2.1
#=GS H4BQQ4_STAAU/7320-7370 AC H4BQQ4.1
#=GS E1E5X8_STAAU/5166-5216 AC E1E5X8.1
#=GS EBH_STAAT/8831-8881 AC A8Z414.1
#=GS H3VSH8_STAEP/578-629 AC H3VSH8.1
#=GS B1C037_9FIRM/1473-1524 AC B1C037.1
#=GS F9K2V5_STAAU/3667-3717 AC F9K2V5.1
#=GS H3UHT7_STAEP/7415-7465 AC H3UHT7.1
#=GS H7LDV9_STRPN/415-461 AC H7LDV9.1
#=GS E5TKZ8_STAAU/8202-8252 AC E5TKZ8.1
#=GS D9RH17_STAAJ/2704-2751 AC D9RH17.1
#=GS F9E0U6_STRSA/1176-1222 AC F9E0U6.1
#=GS H4BH40_STAAU/3411-3461 AC H4BH40.1
#=GS H4B8W1_STAAU/4674-4724 AC H4B8W1.1
#=GS D6ZX19_BIFLJ/413-459 AC D6ZX19.1
#=GS H7GXU2_STRPN/1203-1251 AC H7GXU2.1
#=GS Q8GCW3_STRAG/1264-1310 AC Q8GCW3.1
#=GS D2FLX1_STAAU/7147-7197 AC D2FLX1.1
#=GS H0CJW2_STAAU/1839-1889 AC H0CJW2.1
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