GenomeNet

Database: Pfam
Entry: GBP_repeat
LinkDB: GBP_repeat
Original site: GBP_repeat 
#=GF ID   GBP_repeat
#=GF AC   PF02526.10
#=GF DE   Glycophorin-binding protein
#=GF AU   Bashton M, Bateman A
#=GF SE   Pfam-B_1047 (release 5.4)
#=GF GA   25.00 25.00;
#=GF TC   44.60 42.50;
#=GF NC   22.40 21.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Repeat
#=GF RN   [1]
#=GF RM   7891744
#=GF RT   Isolation of a third member of the Plasmodium falciparum
#=GF RT   glycophorin-binding protein gene family. 
#=GF RA   Rudolph B, Nolte D, Knapp B; 
#=GF RL   Mol Biochem Parasitol 1994;68:173-176.
#=GF RN   [2]
#=GF RM   3512098
#=GF RT   A tandemly repeated sequence determines the binding domain for
#=GF RT   an erythrocyte receptor binding protein of P. falciparum. 
#=GF RA   Kochan J, Perkins M, Ravetch JV; 
#=GF RL   Cell 1986;44:689-696.
#=GF DR   INTERPRO; IPR003681;
#=GF CC   This family contains glycophorin binding proteins from P.
#=GF CC   falciparum the malarial parasite [2]. Glycophorin is a cell
#=GF CC   surface protein of erythrocytes. The Glycophorin binding protein
#=GF CC   contains a tandem 38 residue repeat. In Swiss:P02895 the repeat
#=GF CC   occurs 11 times.
#=GF SQ   85
#=GS Q8IM78_PLAF7/150-186      AC Q8IM78.1
#=GS Q8IEU3_PLAF7/300-337      AC Q8IEU3.1
#=GS W4IYK1_PLAFP/110-147      AC W4IYK1.1
#=GS A0A024V2N5_PLAFA/80-105   AC A0A024V2N5.1
#=GS GBP_PLAFG/576-613         AC P02895.2
#=GS Q8IM78_PLAF7/110-147      AC Q8IM78.1
#=GS Q9U591_PLAFA/101-138      AC Q9U591.1
#=GS W7F228_PLAF8/110-128      AC W7F228.1
#=GS Q9U591_PLAFA/51-88        AC Q9U591.1
#=GS GBP_PLAF7/327-364         AC Q8I6U8.1
#=GS W7JTY4_PLAFA/30-67        AC W7JTY4.1
#=GS GBP_PLAF7/776-813         AC Q8I6U8.1
#=GS Q9U591_PLAFA/151-188      AC Q9U591.1
#=GS W7J7Q0_PLAFA/110-147      AC W7J7Q0.1
#=GS GBP_PLAF7/626-663         AC Q8I6U8.1
#=GS GBP_PLAFG/726-763         AC P02895.2
#=GS Q25767_PLAFA/52-89        AC Q25767.1
#=GS W7JBY3_PLAFA/223-254      AC W7JBY3.1
#=GS W7JTY4_PLAFA/1-29         AC W7JTY4.1
#=GS GBP_PLAF7/377-414         AC Q8I6U8.1
#=GS GBP_PLAF7/676-713         AC Q8I6U8.1
#=GS Q25859_PLAFA/80-117       AC Q25859.1
#=GS GBPH_PLAFB/230-266        AC P32072.1
#=GS GBPH_PLAFB/190-227        AC P32072.1
#=GS Q25767_PLAFA/2-39         AC Q25767.1
#=GS Q25859_PLAFA/118-155      AC Q25859.1
#=GS W4IYK1_PLAFP/148-184      AC W4IYK1.1
#=GS GBP_PLAFG/676-713         AC P02895.2
#=GS A0A024VN44_PLAFA/110-130  AC A0A024VN44.1
#=GS Q8IM78_PLAF7/268-305      AC Q8IM78.1
#=GS W4ICP5_PLAFA/110-129      AC W4ICP5.1
#=GS GBP_PLAF7/426-463         AC Q8I6U8.1
#=GS W7FYI9_PLAFA/94-131       AC W7FYI9.1
#=GS GBPH_PLAFB/110-147        AC P32072.1
#=GS GBP_PLAFG/277-314         AC P02895.2
#=GS Q8IEU3_PLAF7/148-185      AC Q8IEU3.1
#=GS GBP_PLAF7/576-613         AC Q8I6U8.1
#=GS W4IU77_PLAFP/110-138      AC W4IU77.1
#=GS A0A024W162_PLAFA/110-135  AC A0A024W162.1
#=GS Q25859_PLAFA/156-193      AC Q25859.1
#=GS GBP_PLAF7/227-264         AC Q8I6U8.1
#=GS GBP_PLAFG/227-264         AC P02895.2
#=GS A0A024X3T8_PLAFC/110-143  AC A0A024X3T8.1
#=GS Q8IEU3_PLAF7/110-147      AC Q8IEU3.1
#=GS Q25767_PLAFA/102-139      AC Q25767.1
#=GS A0A024W2C4_PLAFA/134-171  AC A0A024W2C4.1
#=GS GBP_PLAFG/427-464         AC P02895.2
#=GS GBPH_PLAFB/269-305        AC P32072.1
#=GS Q25859_PLAFA/194-231      AC Q25859.1
#=GS GBP_PLAF7/277-314         AC Q8I6U8.1
#=GS W7JPN2_PLAFO/110-128      AC W7JPN2.1
#=GS Q8IEU3_PLAF7/262-299      AC Q8IEU3.1
#=GS W7EWM3_PLAF8/110-141      AC W7EWM3.1
#=GS A0A024WKT5_PLAFA/110-139  AC A0A024WKT5.1
#=GS W7K094_PLAFA/110-147      AC W7K094.1
#=GS GBPH_PLAFB/348-385        AC P32072.1
#=GS W7JMH7_PLAFO/110-131      AC W7JMH7.1
#=GS GBP_PLAF7/526-563         AC Q8I6U8.1
#=GS Q25858_PLAFA/34-71        AC Q25858.1
#=GS GBP_PLAFG/526-563         AC P02895.2
#=GS GBP_PLAFG/327-364         AC P02895.2
#=GS GBP_PLAFG/377-414         AC P02895.2
#=GS Q25858_PLAFA/1-21         AC Q25858.1
#=GS Q9U591_PLAFA/1-38         AC Q9U591.1
#=GS Q8IEU3_PLAF7/224-261      AC Q8IEU3.1
#=GS Q8IM78_PLAF7/189-226      AC Q8IM78.1
#=GS GBPH_PLAFB/308-345        AC P32072.1
#=GS GBPH_PLAFB/150-187        AC P32072.1
#=GS Q25859_PLAFA/270-307      AC Q25859.1
#=GS Q9TY78_PLAFA/5-42         AC Q9TY78.1
#=GS GBPH_PLAFB/388-425        AC P32072.1
#=GS A0A024WK30_PLAFA/110-128  AC A0A024WK30.1
#=GS Q25859_PLAFA/232-269      AC Q25859.1
#=GS Q8IEU3_PLAF7/186-223      AC Q8IEU3.1
#=GS GBP_PLAFG/476-513         AC P02895.2
#=GS W7K094_PLAFA/150-180      AC W7K094.1
#=GS A0A024W2C4_PLAFA/110-133  AC A0A024W2C4.1
#=GS GBP_PLAF7/726-763         AC Q8I6U8.1
#=GS Q8IM78_PLAF7/228-265      AC Q8IM78.1
#=GS GBP_PLAFG/626-663         AC P02895.2
#=GS Q8IEU3_PLAF7/338-375      AC Q8IEU3.1
#=GS GBP_PLAF7/476-513         AC Q8I6U8.1
#=GS W7FPR8_PLAFA/110-145      AC W7FPR8.1
#=GS W4ICP5_PLAFA/129-155      AC W4ICP5.1
#=GS W7J7Q0_PLAFA/148-177      AC W7J7Q0.1
Q8IM78_PLAF7/150-186                 ....TSADPEGQIMKAYAADPEYRKHVNVLYQILNHTD----sse.....
Q8IEU3_PLAF7/300-337                 ....TSADPEGQIMKAWAADPVYRKHVNVLYQILTHTDPNDE........
W4IYK1_PLAFP/110-147                 ....TSADPEGQIMKAWAADPEYRKHINVLYQILTHTDPNDE........
A0A024V2N5_PLAFA/80-105              ....TSADPEGQIMKAWAADPEYRKHINV-------------n.......
GBP_PLAFG/576-613                    ....TSSDPEGQIMREYAADPEYRKHLEIFHKILTNTDPNDE........
Q8IM78_PLAF7/110-147                 ....TSADPEGQIMKAYAADPEYRKHLNVLYQILNNTDPNDE........
Q9U591_PLAFA/101-138                 ....TSADPEGQIMREYAADPEYRKHLEIFHKILTNTDPNDE........
W7F228_PLAF8/110-128                 ....TSADPEGQIMKAWAADPEY-------------------........
Q9U591_PLAFA/51-88                   ....TSADPEGQIMREYAADPEYRKHLEVFHKILTNTDPNDE........
GBP_PLAF7/327-364                    ....TSADPEGQIMREYAADPEYRKHLEVFHKILTNTDPNDE........
W7JTY4_PLAFA/30-67                   ....TSADPEGQIMKAYAADPEYRKHVNVLYQILNNTDPNDE........
GBP_PLAF7/776-813                    ....TSADPEGQIMREYAADPEYRKHLEVFHKILTNTDPNDE........
Q9U591_PLAFA/151-188                 ....TSADPEGQIMREYAADPEYRKHLEIFYKILTNTDPNDE........
W7J7Q0_PLAFA/110-147                 ....TSADPEGQIMKAWAADPEYRKHINVLYQILTHTDPNDE........
GBP_PLAF7/626-663                    ....TSSDPEGQIMREYAADPEYRKHLEIFHKILTNTDPNDE........
GBP_PLAFG/726-763                    ....TSADPEGQIMREYAADPEYRKHLEIFHKILTNTDPNDE........
Q25767_PLAFA/52-89                   ....TSADPEGQIMREYASDPEYRKHLEIFYKILTNTDPNDD........
W7JBY3_PLAFA/223-254                 qetl----------TKYAADPEYRKHLEVFHKILTNTDPNDE........
W7JTY4_PLAFA/1-29                    ....---------MKAWAADPVYRKHVNVLYQILTHTDPNDE........
GBP_PLAF7/377-414                    ....TSADPEGQIMREYAADPEYRKHLEVFHKILTNTDPNDE........
GBP_PLAF7/676-713                    ....TSADPEGQIMREYAADPEYRKHLEIFYKILTNTDPNDE........
Q25859_PLAFA/80-117                  ....TSADPEGQIMKAWAADPEYRKHINVLYQILTHTDPNDE........
GBPH_PLAFB/230-266                   ....TSADPEGQIMKAYAADPEYRKHVNVLYQILNHTD----sse.....
GBPH_PLAFB/190-227                   ...s-SADPEGQIMKAYAADPEYRKHVNVLYQILNNTDPNDE........
Q25767_PLAFA/2-39                    ....TSSDPEGQIMREYAADPEYRKHLEIFYKILTNTDPNDE........
Q25859_PLAFA/118-155                 ....TSADPEGQIMKAWAADPEYRKHVNVLYQILTHTDPNDE........
W4IYK1_PLAFP/148-184                 ....TSADPE-QIMKAWAADPEYRKHVNVLYQILNNTDPNDE........
GBP_PLAFG/676-713                    ....TSADPEGQIMREYASDPEYRKHLEIFYKILTNTDPNDD........
A0A024VN44_PLAFA/110-130             ....TSADPEGQIMKAWAADPEY-------------------lw......
Q8IM78_PLAF7/268-305                 ....TSADPEGQIMKAYAADPEYRKHVNVLYQILTNTDPNDE........
W4ICP5_PLAFA/110-129                 ....TSADPEGQIMKAWAADPEY-------------------p.......
GBP_PLAF7/426-463                    ....TSSDPEGQIMREYAADPEYRKHLEVFHKILTNTDPNDE........
W7FYI9_PLAFA/94-131                  ....TSADPEGQIMKAYAADPEYRKHVNVLYQILNNTDPNDE........
GBPH_PLAFB/110-147                   ....TSADPEGQIMKAWAADPEYRKHLNVLYQILNNTDPNDE........
GBP_PLAFG/277-314                    ....TSADPEGQIMREYASDPEYRKHLEIFYKILTNTDPNDD........
Q8IEU3_PLAF7/148-185                 ....TSADPEGQIMKAWAADPEYRKHVNVLYQILTHTDPNDE........
GBP_PLAF7/576-613                    ....TSADPEGQIMREYAADPEYRKHLEIFYKILTNTDPNDE........
W4IU77_PLAFP/110-138                 ....TSADPEGQIMKAWAADPEYRKH----------------qliqniv.
A0A024W162_PLAFA/110-135             ....TSADPEGQIMKAYAADPEYRKHLNV-------------r.......
Q25859_PLAFA/156-193                 ....TSADPEGQIMKAWAADPEYLKHVNVLYQILTNTDPNDE........
GBP_PLAF7/227-264                    ....TSADPEGQIMREYAADPEYRKHLEIFYKILTNTDPNDE........
GBP_PLAFG/227-264                    ....TSADPEGQIMREYAADPEYRKHLEIFYKILTNTDPNDE........
A0A024X3T8_PLAFC/110-143             ....TSADPEGQIMKAWAADPEYRKHINVLYQILTHT-----k.......
Q8IEU3_PLAF7/110-147                 ....TSADPEGQIMKAWAADPEYRKHINVLYQILTHTDPNDE........
Q25767_PLAFA/102-139                 ....TSADPEGQIMREYAADPEYRKHLEVFHKILTNTDPNDE........
A0A024W2C4_PLAFA/134-171             ....TSADPEGQIMKAWAADPEYRKHVNVLYQILTNTDPNDE........
GBP_PLAFG/427-464                    ....TSADPEGQIMREYAADPEYRKHLEVFHKILTNTDPNDE........
GBPH_PLAFB/269-305                   ....TSADPEGQIMKAYAADPEYRKHVNVLYQILNHTD----sse.....
Q25859_PLAFA/194-231                 ....TSADPEGQIMKAWAADPEYRKHVNVLYQILTHTDPNDE........
GBP_PLAF7/277-314                    ....TSADPEGQIMREYASDPEYRKHLEIFYKILTNTDPNDD........
W7JPN2_PLAFO/110-128                 ....TSADPEGQIMKAWAADPEY-------------------........
Q8IEU3_PLAF7/262-299                 ....TSADPEGQIMKAWAADPEYLKHVNVLYQILTNTDPNDE........
W7EWM3_PLAF8/110-141                 ....TSADPEGQIMKAWAADPEYRKHINVN------------iliiny..
A0A024WKT5_PLAFA/110-139             ....TSADPEGQIMKAWAADPEYRKHINVLPNI---------n.......
W7K094_PLAFA/110-147                 ....TSADPEGQIMKAYAADPEYRKHLNVLYQILNNTDPNDE........
GBPH_PLAFB/348-385                   ....TSADPEGQIMKAYAADPEYRKHVNVLYQILNNTDPNDE........
W7JMH7_PLAFO/110-131                 ....TSADPEGQIMKAYAADPEYRKH----------------........
GBP_PLAF7/526-563                    ....TSADPEGQIMREYAADPEYRKHLEIFHKILTNTDPNDE........
Q25858_PLAFA/34-71                   ....TSADPEGQIMREYAADPEYRKHLEIFHKILTNTDPNDE........
GBP_PLAFG/526-563                    ....TSADPEGQIMREYAADPEYRKHLEIFYKILTNTDPNDE........
GBP_PLAFG/327-364                    ....TSADPEGQIMREYAADPEYRKHLEVFHKILTNTDPNDE........
GBP_PLAFG/377-414                    ....TSADPEGQIMREYAADPEYRKHLEIFHKILTNTDPNDE........
Q25858_PLAFA/1-21                    ...a------------------YRKHLEVFHKILTNTDPNDE........
Q9U591_PLAFA/1-38                    ....TSSDPEGQIMREYAADPEYRKHLEVFHKILTNTDPNDE........
Q8IEU3_PLAF7/224-261                 ....TSADPEGQIMKAWAADPEYLKHVNVLYQILTHTDPNDE........
Q8IM78_PLAF7/189-226                 ....TSADPEGQIMKAYAADPEYRKHVNVLYQILNHTDSNE-v.......
GBPH_PLAFB/308-345                   ....TSADPEGQIMKAYAADPEYRKHVNVLYQILNNTDPNDE........
GBPH_PLAFB/150-187                   ....TSADPEGQIMKAYAADPEYRKHLNVLYQILNNTDPNDE........
Q25859_PLAFA/270-307                 ....TSADPEGQIMKAWAADPEYRKHVNVLYQILTNTDPNDE........
Q9TY78_PLAFA/5-42                    ....TSADPEGQIMREYAADPEYRKHLEVFHKILTNTDPNDE........
GBPH_PLAFB/388-425                   ....TSADPEGQIMKAYAADPEYRKHVNVLYQILNNTDPNDE........
A0A024WK30_PLAFA/110-128             ....TSADPEGQIMKAWAADPEY-------------------........
Q25859_PLAFA/232-269                 ....TSADPEGQIMKAWAADPEYRKHVNVLYQILTHTDPNDE........
Q8IEU3_PLAF7/186-223                 ....TSADPEGQIMKAWAADPEYRKHVNVLYQILTHTDPNDE........
GBP_PLAFG/476-513                    ....TSSDPEGQIMREYAADPEYRKHLEIFHKILTNTDPNDE........
W7K094_PLAFA/150-180                 ....TSADPEGQIMKAYAADPEYRKHVNVLF-----------flif....
A0A024W2C4_PLAFA/110-133             ....TSADPEGQIMKAWAADPEYH------------------pnde....
GBP_PLAF7/726-763                    ....TSADPEGQIMREYASDPEYRKHLEIFYKILTNTDPNDD........
Q8IM78_PLAF7/228-265                 ....TSADPEGQIMKAYAADPEYRKHVNVLYQILNNTDPNDE........
GBP_PLAFG/626-663                    ....TSADPEGQIMREYAADPEYRKHLEIFYKILTNTDPNDE........
Q8IEU3_PLAF7/338-375                 ....TSADPEGQIMKAWAADPEYRKHVNVLYQILTNTDPNDE........
GBP_PLAF7/476-513                    ....TSADPEGQIMREYAADPEYRKHLEVFHKILTNTDPNDE........
W7FPR8_PLAFA/110-145                 ....TSADPEGQIMKAWAADPEYRKHINVLYQILTHT-----qyf.....
W4ICP5_PLAFA/129-155                 ...p------------WAADPEYRKHVNVLYQILTNTDPNDE........
W7J7Q0_PLAFA/148-177                 ....TSADPEGQIMKAWAADPEYQKK----------------kkkiiiri
#=GC seq_cons                        ....TSADPEGQIM+tYAADPEYRKHlpVhapILTNTDPNDE........
//
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