GenomeNet

Database: Pfam
Entry: Gal4_dimer
LinkDB: Gal4_dimer
Original site: Gal4_dimer 
#=GF ID   Gal4_dimer
#=GF AC   PF03902.8
#=GF DE   Gal4-like dimerisation domain
#=GF AU   Finn RD
#=GF SE   DOMO:DM03802;
#=GF GA   21.10 21.10;
#=GF TC   21.30 21.60;
#=GF NC   21.00 21.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   11316794
#=GF RT   Recruitment of the transcriptional machinery through GAL11P:
#=GF RT   structure and interactions of the GAL4 dimerization domain. 
#=GF RA   Hidalgo P, Ansari AZ, Schmidt P, Hare B, Simkovich N, Farrell S,
#=GF RA   Shin EJ, Ptashne M, Wagner G; 
#=GF RL   Genes Dev 2001;15:1007-1020.
#=GF DR   INTERPRO; IPR005600;
#=GF DR   SCOP; 1d66; fa;
#=GF SQ   57
#=GS A3LV49_PICST/53-100   AC A3LV49.2
#=GS C5E274_LACTC/50-101   AC C5E274.1
#=GS Q5B3U5_EMENI/38-79    AC Q5B3U5.1
#=GS E7R1G5_PICAD/180-217  AC E7R1G5.1
#=GS G0VHW3_NAUCC/52-93    AC G0VHW3.1
#=GS C5M4V0_CANTT/90-144   AC C5M4V0.1
#=GS G8BWF2_TETPH/51-104   AC G8BWF2.1
#=GS A5DY92_LODEL/161-199  AC A5DY92.1
#=GS H0GP92_9SACH/50-106   AC H0GP92.1
#=GS Q4WWQ9_ASPFU/51-94    AC Q4WWQ9.2
#=GS G3YBG9_ASPNA/18-57    AC G3YBG9.1
#=GS Q755I3_ASHGO/48-102   AC Q755I3.1
#=GS A2QXN4_ASPNC/51-90    AC A2QXN4.1
#=GS G0RHA3_HYPJQ/20-56    AC G0RHA3.1
#=GS C7GTQ5_YEAS2/50-106   AC C7GTQ5.1
#=GS LAC9_KLULA/134-189    AC P08657.1
#=GS B9WCY1_CANDC/56-109   AC B9WCY1.1
#=GS B6QT91_PENMQ/51-102   AC B6QT91.1
#=GS B6HF60_PENCW/51-88    AC B6HF60.1
#=GS C4YKW2_CANAW/63-116   AC C4YKW2.1
#=GS E7M166_YEASV/50-106   AC E7M166.1
#=GS Q76MW9_9ZZZZ/50-106   AC Q76MW9.1
#=GS E7KJ64_YEASA/50-106   AC E7KJ64.1
#=GS B8MMT6_TALSN/51-95    AC B8MMT6.1
#=GS G0VEK9_NAUCC/59-113   AC G0VEK9.1
#=GS H6C9N9_EXODN/56-94    AC H6C9N9.1
#=GS G7XFS3_ASPKW/51-90    AC G7XFS3.1
#=GS H0H1R2_9SACH/50-106   AC H0H1R2.1
#=GS C9SKV6_VERA1/55-93    AC C9SKV6.1
#=GS F2QQF5_PICP7/83-121   AC F2QQF5.1
#=GS C5E4R9_ZYGRC/50-103   AC C5E4R9.1
#=GS G8ZUG5_TORDC/47-96    AC G8ZUG5.1
#=GS A1D836_NEOFI/51-94    AC A1D836.1
#=GS Q5A5R1_CANAL/63-116   AC Q5A5R1.1
#=GS G8YBF8_PICSO/56-114   AC G8YBF8.1
#=GS A1CJE4_ASPCL/73-115   AC A1CJE4.1
#=GS D3XDC8_SACKU/50-106   AC D3XDC8.1
#=GS C8VAN3_EMENI/59-100   AC C8VAN3.1
#=GS G8YMR4_PICSO/55-110   AC G8YMR4.1
#=GS G0WFT2_NAUDC/50-89    AC G0WFT2.1
#=GS G8YMA3_PICSO/56-114   AC G8YMA3.1
#=GS H2AWF0_KAZAF/44-82    AC H2AWF0.1
#=GS GAL4_YEAST/50-106     AC P04386.2
#=GS GAL4_YEAST/50-106     DR PDB; 1HBW B; 50-106;
#=GS GAL4_YEAST/50-106     DR PDB; 1D66 A; 50-64;
#=GS GAL4_YEAST/50-106     DR PDB; 3COQ A; 50-96;
#=GS GAL4_YEAST/50-106     DR PDB; 1D66 B; 50-64;
#=GS GAL4_YEAST/50-106     DR PDB; 1HBW A; 50-106;
#=GS GAL4_YEAST/50-106     DR PDB; 3COQ B; 50-96;
#=GS H8X4E5_9ASCO/78-135   AC H8X4E5.1
#=GS G2WNT8_YEASK/50-106   AC G2WNT8.1
#=GS G8BK22_CANPC/89-144   AC G8BK22.1
#=GS B3LKI4_YEAS1/50-106   AC B3LKI4.1
#=GS A6ZW08_YEAS7/50-106   AC A6ZW08.1
#=GS G0WCD0_NAUDC/51-77    AC G0WCD0.1
#=GS G2XAH8_VERDV/55-91    AC G2XAH8.1
#=GS Q6BMQ9_DEBHA/61-118   AC Q6BMQ9.2
#=GS C4QZ96_PICPG/83-121   AC C4QZ96.1
#=GS G3BD88_CANTC/59-119   AC G3BD88.1
#=GS C4XW80_CLAL4/184-238  AC C4XW80.1
#=GS E4ZYV7_LEPMJ/155-196  AC E4ZYV7.1
#=GS G8YDY4_PICSO/55-109   AC G8YDY4.1
#=GS Q6BUE8_DEBHA/53-93    AC Q6BUE8.2
A3LV49_PICST/53-100              TRTHLSKVEDRVKALEKLLVRLLPgD....V....EIND....LL....RA..SeS..N.SDIKE---------------evet..............
C5E274_LACTC/50-101              TRAHLTEVENRLHQLERLFGTLFP.G....Y....DWKD....TS....KD..P.S..L.SKLRHMLK------------nqkdqye...........
Q5B3U5_EMENI/38-79               TRQHLTYVEDRLQAFESALGRLFP.G....G....DLDA....TV....--..-.-..-.--------------------rsllqdqdpl........
E7R1G5_PICAD/180-217             TRAYLTKVENRVKQLETFLLKAFP.G....E....DLEQ....ML....--..-.-..-.--------------------ggfsrt............
G0VHW3_NAUCC/52-93               TRAHLTKVEDRLTKLEFLFNELFT.K....R....EMDG....--....--..-.-..-.--------------------dakysvnksike......
C5M4V0_CANTT/90-144              TRAHLTEVENRVAQLESILNYLLPpN....T....DIDD....LI....KN..K.T..LlEPIKQNITK-----------lascese...........
G8BWF2_TETPH/51-104              TRAHLTEVEDRLSKFEQLFYEFFP.N....I....NLDN....TL....NL..N.N..A.TEMKKIL--LDNSVD-----fikd..............
A5DY92_LODEL/161-199             TRAHLTEVENKLQKLEDLLAYILP.S....-....----....--....--..-.-..-.--------------------dyfaaldeivgege....
H0GP92_9SACH/50-106              TRAHLTEVESRLERLEQLFLLIFP.R....E....DLDM....IL....KM..D.S..L.QDIKALLTGLFVQDNVNKDA..................
Q4WWQ9_ASPFU/51-94               TRQHLTYVEERLQAFETALGRLFP.G....G....DLDAtvrsLL....HD..Q.D..T.--------------------pqk...............
G3YBG9_ASPNA/18-57               TRQHLTYVEERLQAFETALSRLFP.G....G....DLDA....TV....--..-.-..-.--------------------rsllhdqe..........
Q755I3_ASHGO/48-102              TRAHLTEVETRLGQMEQLLRNAFV.D....L....DADT....LL....KH..R.H..D.PQLREIL--FGRTVDIGALS..................
A2QXN4_ASPNC/51-90               TRQHLTYVEERLQAFETALSRLFP.G....G....DLDA....TV....--..-.-..-.--------------------rsllhdqe..........
G0RHA3_HYPJQ/20-56               TRRHLTEVEERLEQAEALIRQLRA.-....-....----....--....--..-.-..-.--------------------alpqhtilsegsn.....
C7GTQ5_YEAS2/50-106              TRAHLTEVESRLERLEQLFLLIFP.R....E....DLDM....IL....KM..D.S..L.QDIKALLTRLFVQDNVNKDA..................
LAC9_KLULA/134-189               TRAHLTEMENRVAELEQFLKELFP.V....W....DIDR....LL....QQ..K.D..T.YRIRELLT-MGSTNTVPGLA..................
B9WCY1_CANDC/56-109              TRAHLTEVETRVTQLEGILRYLLP.S....E....NIDD....MI....ND..H.D..K.VILAPIRQKLQPP-------akpc..............
B6QT91_PENMQ/51-102              TRQHLTYVEDRLNAVETALSKLFP.G....G....DLDNvvssLL....QD..Q.D..-.--------------------phqrkslspsvs......
B6HF60_PENCW/51-88               TRQHLTYVEDRLHSFETALGRLFP.G....G....DLDA....TL....R-..-.-..-.--------------------sllqn.............
C4YKW2_CANAW/63-116              TRAHLTEVENRVSQLEGILHYLLP.D....H....DIDE....II....ND..H.D..K.AILAPIRQKLQPS---PKPC..................
E7M166_YEASV/50-106              TRAHLTEVESRLERLEQLFLLIFP.R....E....DLDM....IL....KM..D.S..L.QDIKALLTXLFVQDNVNKDA..................
Q76MW9_9ZZZZ/50-106              TRAHLTEVESRLERLEQLFLLIFP.R....E....DLDM....IL....KM..D.S..L.QDIKALLTGLFVQDNVNKDA..................
E7KJ64_YEASA/50-106              TRAHLTEVESRLERLEQLFLLIFP.R....E....DLDM....IL....KM..D.S..L.QDIKALLTGLFVQDNVNKDA..................
B8MMT6_TALSN/51-95               TRQHLTYVEDRLSAVETALSKLFP.G....G....DLDS....VV....S-..-.-..-.--------------------sllqdqdphsrk......
G0VEK9_NAUCC/59-113              TRVHLTQTENKLEKLERLFIELFP.D....E....NVEN....LI....HV..M.D..S.KDVMKLRD-L----------klkmaqivh.........
H6C9N9_EXODN/56-94               TRKHLTEVEERLEKAEALLRTVFT.E....A....QLAE....ML....AH..-.-..-.--------------------gasag.............
G7XFS3_ASPKW/51-90               TRQHLTYVEERLQAFETALSRLFP.G....G....DLDA....TV....--..-.-..-.--------------------rsllhdqe..........
H0H1R2_9SACH/50-106              TRAHLTEVESRLEKLEDLFLLMFP.R....E....NLDS....IL....NM..D.S..L.DEVKVMLKQLYMQD------ygdtda............
C9SKV6_VERA1/55-93               TRVYLTDVESRLERVEKLFAELLP.D....V....DINK....AL....GA..-.-..-.--------------------ratgt.............
F2QQF5_PICP7/83-121              TRAHLTKVENRVRMLEDLLERVFP.T....Q....SVDQ....LL....EK..R.T..-.--------------------sls...............
C5E4R9_ZYGRC/50-103              TRAHMTKVETKLDRLEQLFRELFP.E....E....DLDK....VL....ND..R.N..T.GQLKERLKRFL---------vrrakg............
G8ZUG5_TORDC/47-96               TRVHLTEVESRLEYLEQLLTELFP.G....V....DLDE....IY....KC..E.S..Y.DKAN----------------nligrllls.........
A1D836_NEOFI/51-94               TRQHLTYVEERLQAFETALGRLFP.G....G....DLDAtvrsLL....QD..Q.D..A.P-------------------qk................
Q5A5R1_CANAL/63-116              TRAHLTEVENRVSQLEGILHYLLP.D....H....DIDE....II....ND..H.D..K.AILAPIRQKLQPS---PKPC..................
G8YBF8_PICSO/56-114              TRAHLTEVEAKVRGLENIVSFLLA.RdlssN....QIDG....LL....RQ..E.R..Y.--------------------kevlsphrralqsacnen
A1CJE4_ASPCL/73-115              TRQHLTFVEERLQAFETALGRLFP.G....G....DLDA....TV....--..-.-..-.--------------------rsllqdqdvvq.......
D3XDC8_SACKU/50-106              TRAHLTEVESRLEKLEDLFLLMFP.R....E....NLDS....IL....NM..D.S..L.DEVKVMLKQLYMQD------ygdtda............
C8VAN3_EMENI/59-100              TRQHLTYVEDRLQAFESALGRLFP.G....G....DLDA....TV....--..-.-..-.--------------------rsllqdqdpl........
G8YMR4_PICSO/55-110              TRTHLTKVEGRVSSLERLLKKILPeD....V....EIND....LL....RT..M.E..A.SDKTPIL-------------ndniyndnntd.......
G0WFT2_NAUDC/50-89               TRVHLTNLENKLEKLENLFNKLLP.N....E....NINE....IL....QK..F.D..S.--------------------ndd...............
G8YMA3_PICSO/56-114              TRAHLTEVEAKVRGLENMVSFLLA.RdlssN....QIDG....LL....RQ..E.R..Y.--------------------kevlsphrralqsacnen
H2AWF0_KAZAF/44-82               TRAHLTEVEKKLNNLTILFGKLFP.G....E....NIGN....LV....KR..-.-..-.--------------------fnids.............
GAL4_YEAST/50-106                TRAHLTEVESRLERLEQLFLLIFP.R....E....DLDM....IL....KM..D.S..L.QDIKALLTGLFVQDNVNKDA..................
#=GR GAL4_YEAST/50-106     SS    -HHHHHHHHHHHHHHHHHHCCCSS.S....S....HHHH....HH....HH..H.S..C.HHHHHHHHHHXXSXXSSXXX..................
H8X4E5_9ASCO/78-135              TRAHLTDVETKLSKMEDIFHHLLP.N....Y....DLDD....IL....NN..F.SnfE.ERLKPVKDKLS---------dgeengin..........
G2WNT8_YEASK/50-106              TRAHLTEVESRLERLEQLFLLIFP.R....E....DLDM....IL....KM..D.S..L.QDIKALLTGLFVQDNVNKDA..................
G8BK22_CANPC/89-144              TRAHLTDVETKLSKMEDIFHHLLP.N....Y....DLDD....IL....NNfgN.F..E.EKLKPVKDKLS---------eagkdn............
B3LKI4_YEAS1/50-106              TRAHLTEVESRLERLEQLFLLIFP.R....E....DLDM....IL....KM..D.S..L.QDIKALLTRLFVQDNVNKDA..................
A6ZW08_YEAS7/50-106              TRAHLTEVESRLERLEQLFLLIFP.R....E....DLDM....IL....KM..D.S..L.QDIKALLTGLFVQDNVNKDA..................
G0WCD0_NAUDC/51-77               TRAHLTRVEDKLSKLENLFNALFI.-....-....----....--....--..-.-..-.--------------------gke...............
G2XAH8_VERDV/55-91               TRVYLTDVESRLERVEKLFAELLP.D....V....DIDQ....AL....--..-.-..-.--------------------garva.............
Q6BMQ9_DEBHA/61-118              TRAHLTQVENKVKSLENLITYLLP.Q....EvnsrGIDQ....LL....YQ..N.T..F.K-------------------dvlrpykdmlqngsts..
C4QZ96_PICPG/83-121              TRAHLTKVENRVRMLEDLLERVFP.T....Q....SVDQ....LL....EK..R.T..-.--------------------sls...............
G3BD88_CANTC/59-119              TRAYLTQVESRATTLEKILRRMLPeD....V....EVQD....LLriaeNE..D.D..D.NELENIHNNFFKQIN-----ltsk..............
C4XW80_CLAL4/184-238             TRAHLTEVETRLTRVTQMLRFLLPpG....V....DVDK....LM....ES.gR.F..E.GALRPFREKLR---------gsept.............
E4ZYV7_LEPMJ/155-196             TRAYLTGVEKRLHDVEALVTQLLP.G....V....SIDE....VL....AS..-.-..-.--------------------periqnaa..........
G8YDY4_PICSO/55-109              TRTHLTKVEGRVNSLERLLKKILPeD....V....EIND....LL....RT..M.E..A.SDKTPIL-------------dnsyndnstd........
Q6BUE8_DEBHA/53-93               TRAYLTRVEKRVKGLESLLKRLLPeD....V....EINE....LL....R-..-.-..-.--------------------tieinks...........
#=GC SS_cons                     -HHHHHHHHHHHHHHHHHHCCCSS.S....S....HHHH....HH....HH..H.S..C.HHHHHHHHHHXXSXXSSXXX..................
#=GC seq_cons                    TRAHLTcVEsRLppLEplhtpLFP.s....t....-lDt....lL....p.....p..........................................
//
DBGET integrated database retrieval system