GenomeNet

Database: Pfam
Entry: HTH_26
LinkDB: HTH_26
Original site: HTH_26 
#=GF ID   HTH_26
#=GF AC   PF13443.3
#=GF DE   Cro/C1-type HTH DNA-binding domain
#=GF AU   Coggill P
#=GF SE   Jackhmmer:Q2Y718
#=GF GA   22.00 22.00;
#=GF TC   22.00 22.00;
#=GF NC   21.90 21.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Helix-turn-helix
#=GF DR   INTERPRO; IPR001387;
#=GF CC   This is a helix-turn-helix domain that probably binds to DNA.
#=GF SQ   1883
#=GS R5CXA4_9BACT/7-69         AC R5CXA4.1
#=GS A4FC48_SACEN/10-78        AC A4FC48.1
#=GS C0QD05_DESAH/9-70         AC C0QD05.1
#=GS K9TUE6_9CYAN/10-73        AC K9TUE6.1
#=GS Q8NQX8_CORGL/6-68         AC Q8NQX8.1
#=GS I0HE30_ACTM4/6-68         AC I0HE30.1
#=GS A0A0D1XTH4_ANEMI/10-73    AC A0A0D1XTH4.1
#=GS K9VQ16_9CYAN/5-68         AC K9VQ16.1
#=GS D4K7A2_9FIRM/48-101       AC D4K7A2.1
#=GS R5ALV7_9CLOT/5-67         AC R5ALV7.1
#=GS Q31LT1_SYNE7/6-69         AC Q31LT1.1
#=GS I1YQT4_PREI7/20-81        AC I1YQT4.1
#=GS G2PF70_STRVO/27-75        AC G2PF70.1
#=GS G4Q4G6_ACIIR/1-51         AC G4Q4G6.1
#=GS A4XNJ2_PSEMY/10-66        AC A4XNJ2.1
#=GS B8HMD4_CYAP4/9-71         AC B8HMD4.1
#=GS S5R6G8_9STRE/12-74        AC S5R6G8.1
#=GS R6MBQ8_9BACE/9-69         AC R6MBQ8.1
#=GS R5VY05_9FIRM/10-69        AC R5VY05.1
#=GS A0JQP9_LACS1/5-62         AC A0JQP9.1
#=GS G8M001_CLOCD/7-67         AC G8M001.1
#=GS K9V3I5_9CYAN/15-75        AC K9V3I5.1
#=GS A0A0D4DP39_9ACTN/4-71     AC A0A0D4DP39.1
#=GS R5J0K6_9FIRM/7-67         AC R5J0K6.1
#=GS Q166U3_ROSDO/6-67         AC Q166U3.1
#=GS Q2Y718_NITMU/5-67         AC Q2Y718.1
#=GS B8I859_CLOCE/7-67         AC B8I859.1
#=GS K4IBN8_PSYTT/3-64         AC K4IBN8.1
#=GS G1UU53_9DELT/6-68         AC G1UU53.1
#=GS K9WM18_9CYAN/7-70         AC K9WM18.1
#=GS C7PBR9_CHIPD/6-68         AC C7PBR9.1
#=GS R5AYH6_9BACT/6-55         AC R5AYH6.1
#=GS E6K9I3_9BACT/11-72        AC E6K9I3.1
#=GS A8L6T5_FRASN/10-78        AC A8L6T5.1
#=GS D4K0D5_9FIRM/6-66         AC D4K0D5.1
#=GS R6MPN4_9FIRM/10-69        AC R6MPN4.1
#=GS X4ZJM1_9BACL/6-68         AC X4ZJM1.1
#=GS Q2N5R1_ERYLH/12-74        AC Q2N5R1.1
#=GS Q0RZY1_RHOJR/6-75         AC Q0RZY1.1
#=GS Q81P17_BACAN/6-68         AC Q81P17.1
#=GS R5RPS6_9BACE/6-68         AC R5RPS6.1
#=GS E1VUS6_ARTAR/6-68         AC E1VUS6.1
#=GS D7CBR0_STRBB/6-68         AC D7CBR0.1
#=GS U2SSC7_9FIRM/16-76        AC U2SSC7.1
#=GS Q9ABS0_CAUCR/2-64         AC Q9ABS0.1
#=GS F6CES8_LACKZ/18-78        AC F6CES8.1
#=GS R7QUY1_9FIRM/7-67         AC R7QUY1.1
#=GS R5FBW2_9CLOT/7-66         AC R5FBW2.1
#=GS R5LJR4_9FIRM/7-67         AC R5LJR4.1
#=GS A0A022LHI6_9MICO/14-76    AC A0A022LHI6.1
#=GS G2SN28_LACRR/5-64         AC G2SN28.1
#=GS R4KGD3_9FIRM/7-67         AC R4KGD3.1
#=GS F2NY80_TRES6/44-105       AC F2NY80.1
#=GS R6H202_9CLOT/10-69        AC R6H202.1
#=GS D4ILH4_9BACT/19-78        AC D4ILH4.1
#=GS A4VUY1_STRSY/6-63         AC A4VUY1.1
#=GS A0A0A8UQA5_LEGHA/9-71     AC A0A0A8UQA5.1
#=GS X2GLP7_9BACI/9-71         AC X2GLP7.1
#=GS K0B3N3_CLOA9/9-71         AC K0B3N3.1
#=GS B8ICQ8_METNO/6-58         AC B8ICQ8.1
#=GS R7NTZ7_9BACE/6-68         AC R7NTZ7.1
#=GS D9R6C9_CLOSW/7-67         AC D9R6C9.1
#=GS R5Z609_9FIRM/7-69         AC R5Z609.1
#=GS R6CU00_9BACE/6-67         AC R6CU00.1
#=GS A0A098BZS2_9PORP/7-68     AC A0A098BZS2.1
#=GS D5DIJ0_BACMD/6-68         AC D5DIJ0.1
#=GS A4F764_SACEN/6-68         AC A4F764.1
#=GS R7I0Q1_9CLOT/4-61         AC R7I0Q1.1
#=GS R6N5R9_9CLOT/7-67         AC R6N5R9.1
#=GS D4J9C9_9FIRM/7-67         AC D4J9C9.1
#=GS B1HW12_LYSSC/1-59         AC B1HW12.1
#=GS A5WD97_PSYWF/20-82        AC A5WD97.1
#=GS D4LXM9_9FIRM/7-68         AC D4LXM9.1
#=GS C8W4J5_DESAS/6-67         AC C8W4J5.1
#=GS X2HIL6_9NEIS/6-68         AC X2HIL6.1
#=GS K8WD66_9ENTR/6-66         AC K8WD66.1
#=GS R5IMR5_9CLOT/6-66         AC R5IMR5.1
#=GS R6H426_9FIRM/6-68         AC R6H426.1
#=GS E7GNV9_CLOSY/6-65         AC E7GNV9.1
#=GS K1MGC7_9LACT/7-67         AC K1MGC7.1
#=GS K9ZCA4_ANACC/9-72         AC K9ZCA4.1
#=GS W8TFT8_EUBAC/1-52         AC W8TFT8.1
#=GS K9VTU9_9CYAN/16-67        AC K9VTU9.1
#=GS C5BUS5_BEUC1/7-68         AC C5BUS5.1
#=GS R5QTW6_9FIRM/6-68         AC R5QTW6.1
#=GS R6K7I4_9FIRM/6-66         AC R6K7I4.1
#=GS Q8ET46_OCEIH/6-68         AC Q8ET46.1
#=GS R6I334_9FIRM/7-67         AC R6I334.1
#=GS C8W285_DESAS/7-66         AC C8W285.1
#=GS E6SN39_BACT6/20-78        AC E6SN39.1
#=GS D1AHF6_SEBTE/96-163       AC D1AHF6.1
#=GS R6C7C5_9FIRM/19-81        AC R6C7C5.1
#=GS K9VW08_9CYAN/7-69         AC K9VW08.1
#=GS L0EEP3_THECK/8-67         AC L0EEP3.1
#=GS R6AY58_9CLOT/7-65         AC R6AY58.1
#=GS A0A0A2U7W8_9BACL/7-66     AC A0A0A2U7W8.1
#=GS C8VWK3_DESAS/6-68         AC C8VWK3.1
#=GS G9WQ91_9FIRM/16-80        AC G9WQ91.1
#=GS X5E0D1_9BACT/6-68         AC X5E0D1.1
#=GS R5KU40_9BACT/12-71        AC R5KU40.1
#=GS R7XY62_9ACTN/4-72         AC R7XY62.1
#=GS R6IDU2_9FIRM/7-69         AC R6IDU2.1
#=GS R6TUZ2_9FIRM/7-67         AC R6TUZ2.1
#=GS R6CHM8_9BACE/1-61         AC R6CHM8.1
#=GS R5B8T9_9CLOT/11-72        AC R5B8T9.1
#=GS Q0S1A8_RHOJR/6-75         AC Q0S1A8.1
#=GS K4LCD5_9FIRM/6-65         AC K4LCD5.1
#=GS C8WHB6_EGGLE/6-68         AC C8WHB6.1
#=GS R6EKS3_9FIRM/10-69        AC R6EKS3.1
#=GS F4B227_DOKS4/6-68         AC F4B227.1
#=GS R6GJ43_9FIRM/5-67         AC R6GJ43.1
#=GS A0A024PA23_9BACI/6-68     AC A0A024PA23.1
#=GS W0SIF9_9RHOO/19-81        AC W0SIF9.1
#=GS G8LUR3_CLOCD/7-67         AC G8LUR3.1
#=GS R6D239_9CLOT/6-66         AC R6D239.1
#=GS R6ZHB1_9CLOT/6-66         AC R6ZHB1.1
#=GS Q18AA2_PEPD6/6-64         AC Q18AA2.1
#=GS A0AWE2_ARTS2/4-72         AC A0AWE2.1
#=GS A3DEH3_CLOTH/16-80        AC A3DEH3.1
#=GS Q5NG46_FRATT/6-67         AC Q5NG46.1
#=GS K9VT65_9CYAN/12-75        AC K9VT65.1
#=GS R5BE92_9CLOT/7-67         AC R5BE92.1
#=GS R7A3A2_9FIRM/10-71        AC R7A3A2.1
#=GS R5K9X1_9CLOT/7-67         AC R5K9X1.1
#=GS G8MG56_9BURK/21-76        AC G8MG56.1
#=GS R6U0F0_9CLOT/10-70        AC R6U0F0.1
#=GS F4GJZ2_SPHCD/6-66         AC F4GJZ2.1
#=GS V5SDM0_9RHIZ/19-87        AC V5SDM0.1
#=GS U5QE17_9CYAN/6-69         AC U5QE17.1
#=GS E0UM26_CYAP2/15-76        AC E0UM26.1
#=GS L0F446_DESDL/6-68         AC L0F446.1
#=GS A8LB46_FRASN/12-79        AC A8LB46.1
#=GS R5ELY4_9FIRM/7-66         AC R5ELY4.1
#=GS R7MKN3_9FIRM/16-76        AC R7MKN3.1
#=GS A0A0B4XY36_9PROT/6-68     AC A0A0B4XY36.1
#=GS D4JS86_9FIRM/6-67         AC D4JS86.1
#=GS B1KD21_SHEWM/6-68         AC B1KD21.1
#=GS Q8DMF7_THEEB/4-64         AC Q8DMF7.1
#=GS R5CB66_9BACE/6-64         AC R5CB66.1
#=GS C1CXV6_DEIDV/6-68         AC C1CXV6.1
#=GS Q9RIW6_STRCO/6-68         AC Q9RIW6.1
#=GS V9W4Q6_9BACL/6-65         AC V9W4Q6.1
#=GS A0A0B5AH56_9BACL/6-68     AC A0A0B5AH56.1
#=GS R5BER3_9BACE/4-63         AC R5BER3.1
#=GS D4LLY5_9FIRM/7-67         AC D4LLY5.1
#=GS L0F1F5_DESDL/7-67         AC L0F1F5.1
#=GS R6ZN20_9CLOT/6-67         AC R6ZN20.1
#=GS D4M0G9_9FIRM/7-67         AC D4M0G9.1
#=GS V9VU21_9RHOB/7-65         AC V9VU21.1
#=GS S0N7W3_9ENTE/6-68         AC S0N7W3.1
#=GS R4KT43_9FIRM/7-67         AC R4KT43.1
#=GS R5IC12_9FIRM/10-68        AC R5IC12.1
#=GS R5WG23_9DELT/10-70        AC R5WG23.1
#=GS Q5WE19_BACSK/6-74         AC Q5WE19.1
#=GS B0JQX3_MICAN/12-74        AC B0JQX3.1
#=GS R6IC08_9FIRM/10-70        AC R6IC08.1
#=GS R5FL08_9FIRM/8-67         AC R5FL08.1
#=GS K9PTQ2_9CYAN/9-72         AC K9PTQ2.1
#=GS Q2W765_MAGSA/23-80        AC Q2W765.1
#=GS V9W962_9BACL/6-67         AC V9W962.1
#=GS F7V504_CLOSS/27-87        AC F7V504.1
#=GS D4JUQ1_9FIRM/7-67         AC D4JUQ1.1
#=GS R5NRG9_9PORP/6-68         AC R5NRG9.1
#=GS K0JR99_SACES/6-68         AC K0JR99.1
#=GS C8PBM2_9LACO/1-58         AC C8PBM2.1
#=GS R6URQ8_9FIRM/7-67         AC R6URQ8.1
#=GS U7FRQ0_9RHOB/9-66         AC U7FRQ0.1
#=GS V9W929_9BACL/5-67         AC V9W929.1
#=GS A0A0D4DGT1_9ACTN/12-74    AC A0A0D4DGT1.1
#=GS R7EUT1_9FIRM/2-66         AC R7EUT1.1
#=GS R7HEY2_9FIRM/24-86        AC R7HEY2.1
#=GS R5BWY6_9FIRM/7-68         AC R5BWY6.1
#=GS Q165K0_ROSDO/18-78        AC Q165K0.1
#=GS R7JW17_9FIRM/9-70         AC R7JW17.1
#=GS R5D8R7_9FIRM/5-67         AC R5D8R7.1
#=GS A0A0A7LC03_9EURY/6-68     AC A0A0A7LC03.1
#=GS R6JWB4_9CLOT/5-58         AC R6JWB4.1
#=GS F5LDS9_9BACL/1-51         AC F5LDS9.1
#=GS G8RNR2_MYCRN/10-78        AC G8RNR2.1
#=GS D4L066_9FIRM/43-103       AC D4L066.1
#=GS D1CD41_THET1/7-68         AC D1CD41.1
#=GS Q5LQB2_RUEPO/20-78        AC Q5LQB2.1
#=GS R6DSA5_9FIRM/10-70        AC R6DSA5.1
#=GS A0A0A1GZ81_9LACO/6-67     AC A0A0A1GZ81.1
#=GS E8NGE6_MICTS/15-75        AC E8NGE6.1
#=GS D9R949_CLOSW/4-62         AC D9R949.1
#=GS D4KY35_9FIRM/7-67         AC D4KY35.1
#=GS R5CWB5_9FIRM/10-70        AC R5CWB5.1
#=GS F8EHW4_RUNSL/6-68         AC F8EHW4.1
#=GS R6PF49_9FIRM/6-68         AC R6PF49.1
#=GS R6UDB9_9CLOT/10-70        AC R6UDB9.1
#=GS D4LVH6_9FIRM/7-66         AC D4LVH6.1
#=GS K9WEY1_9CYAN/5-68         AC K9WEY1.1
#=GS K9SR78_9SYNE/7-70         AC K9SR78.1
#=GS R3W2Z9_9ENTE/8-61         AC R3W2Z9.1
#=GS R6HTW1_9FIRM/2-66         AC R6HTW1.1
#=GS A1SBX7_NOCSJ/4-72         AC A1SBX7.1
#=GS A0KQ64_AERHH/14-74        AC A0KQ64.1
#=GS C6PV71_9CLOT/10-71        AC C6PV71.1
#=GS D1AHX8_SEBTE/5-72         AC D1AHX8.1
#=GS Q2SF66_HAHCH/9-65         AC Q2SF66.1
#=GS Q89YH9_BACTN/4-67         AC Q89YH9.1
#=GS A0AWT8_ARTS2/4-72         AC A0AWT8.1
#=GS V9VZD7_9RHOB/10-66        AC V9VZD7.1
#=GS F0T1T4_SYNGF/2-66         AC F0T1T4.1
#=GS A0KGX0_AERHH/6-68         AC A0KGX0.1
#=GS R6UC73_9FIRM/8-66         AC R6UC73.1
#=GS F2R231_STRVP/6-68         AC F2R231.1
#=GS G2PIA9_MURRD/6-67         AC G2PIA9.1
#=GS R7K4D5_9FIRM/2-63         AC R7K4D5.1
#=GS A0A0F5HM09_9BACI/6-68     AC A0A0F5HM09.1
#=GS R5IJM0_9FIRM/10-71        AC R5IJM0.1
#=GS D7WC13_9CORY/4-64         AC D7WC13.1
#=GS A8ZNL4_ACAM1/6-71         AC A8ZNL4.1
#=GS Q81E15_BACCR/9-71         AC Q81E15.1
#=GS A9KT17_CLOPH/6-68         AC A9KT17.1
#=GS R5E4Q9_9CLOT/3-67         AC R5E4Q9.1
#=GS R7MSP0_9FIRM/5-64         AC R7MSP0.1
#=GS R5JZG5_9FIRM/17-75        AC R5JZG5.1
#=GS Q3L9G9_RHOE4/6-75         AC Q3L9G9.1
#=GS K9W7X5_9CYAN/14-77        AC K9W7X5.1
#=GS B0TGG8_HELMI/7-67         AC B0TGG8.1
#=GS G8T7V3_NIAKG/3-62         AC G8T7V3.1
#=GS R7MA57_9CLOT/1-58         AC R7MA57.1
#=GS J7Q713_METSZ/6-68         AC J7Q713.1
#=GS Q9A0Z3_STRP1/7-67         AC Q9A0Z3.1
#=GS B9TGR6_RICCO/20-80        AC B9TGR6.1
#=GS S6CKE4_9ACTN/6-68         AC S6CKE4.1
#=GS A0A059VV21_STRA9/6-68     AC A0A059VV21.1
#=GS B8FJ34_DESAA/9-69         AC B8FJ34.1
#=GS A0A0C2YDD8_BACBA/7-70     AC A0A0C2YDD8.1
#=GS C5D9H7_GEOSW/8-49         AC C5D9H7.1
#=GS I1YRR1_PREI7/1-52         AC I1YRR1.1
#=GS A0A075JP01_9BACI/19-78    AC A0A075JP01.1
#=GS R6DEU0_9CLOT/18-78        AC R6DEU0.1
#=GS R5T9D5_9CLOT/10-70        AC R5T9D5.1
#=GS R5HHM7_9FIRM/7-68         AC R5HHM7.1
#=GS R6YIU4_9FIRM/2-66         AC R6YIU4.1
#=GS V6SF45_9FLAO/6-68         AC V6SF45.1
#=GS E6UEZ4_RUMA7/8-68         AC E6UEZ4.1
#=GS A5I4U6_CLOBH/1-53         AC A5I4U6.1
#=GS W5X0W6_BDEBC/10-66        AC W5X0W6.1
#=GS R6J1L1_9FIRM/6-66         AC R6J1L1.1
#=GS R5HV68_9FIRM/1-56         AC R5HV68.1
#=GS R5D3Y8_9FIRM/5-65         AC R5D3Y8.1
#=GS R7G1Q7_9PROT/4-64         AC R7G1Q7.1
#=GS R5AXC3_9FIRM/5-64         AC R5AXC3.1
#=GS B8J3K8_DESDA/5-63         AC B8J3K8.1
#=GS R6LSP0_9FIRM/30-90        AC R6LSP0.1
#=GS Q8G5V9_BIFLO/6-68         AC Q8G5V9.1
#=GS R5LE37_9FIRM/7-65         AC R5LE37.1
#=GS A0A089MC48_9BACL/6-68     AC A0A089MC48.1
#=GS A0A0A8EYP7_9ACTN/6-68     AC A0A0A8EYP7.1
#=GS W0IWF9_9BACT/8-64         AC W0IWF9.1
#=GS B3E7Z3_GEOLS/5-73         AC B3E7Z3.1
#=GS R5SNX7_9FIRM/7-69         AC R5SNX7.1
#=GS Q5WLM6_BACSK/9-71         AC Q5WLM6.1
#=GS D3V0H6_XENBS/5-67         AC D3V0H6.1
#=GS F2JTG2_MARM1/10-70        AC F2JTG2.1
#=GS R6YUX5_9FIRM/8-68         AC R6YUX5.1
#=GS A0A085BWH4_9RHOB/29-86    AC A0A085BWH4.1
#=GS R6K0W3_9CLOT/6-68         AC R6K0W3.1
#=GS D1BH43_SANKS/13-75        AC D1BH43.1
#=GS R7PSG3_9FIRM/7-67         AC R7PSG3.1
#=GS D5BDA7_ZUNPS/1-53         AC D5BDA7.1
#=GS D5V5F6_ARCNC/6-66         AC D5V5F6.1
#=GS U5VNF1_9ACTN/12-74        AC U5VNF1.1
#=GS D9RA66_CLOSW/7-67         AC D9RA66.1
#=GS K9XQF9_STAC7/1-57         AC K9XQF9.1
#=GS W0EWH0_9PORP/7-67         AC W0EWH0.1
#=GS Q7UL15_RHOBA/17-62        AC Q7UL15.1
#=GS R5TG82_9CLOT/6-68         AC R5TG82.1
#=GS I7EN74_PHAIB/21-81        AC I7EN74.1
#=GS R3U171_9ENTE/4-69         AC R3U171.1
#=GS D6ZGV0_MOBCV/5-67         AC D6ZGV0.1
#=GS R5E392_9FIRM/7-67         AC R5E392.1
#=GS F5Y6M4_TREAZ/9-68         AC F5Y6M4.1
#=GS R7A5S7_9FIRM/6-68         AC R7A5S7.1
#=GS A0A0D5AEX2_9NOCA/13-74    AC A0A0D5AEX2.1
#=GS D6S542_9LACO/4-65         AC D6S542.1
#=GS R7ETN6_9FIRM/8-70         AC R7ETN6.1
#=GS R5IKJ5_9CLOT/2-66         AC R5IKJ5.1
#=GS B8I1S0_CLOCE/6-68         AC B8I1S0.1
#=GS U2S350_9FIRM/6-66         AC U2S350.1
#=GS J7LFB9_NOCAA/6-68         AC J7LFB9.1
#=GS R6QFZ8_9FIRM/1-68         AC R6QFZ8.1
#=GS Q2K1H8_RHIEC/8-61         AC Q2K1H8.1
#=GS E6U1L0_BACCJ/6-68         AC E6U1L0.1
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