GenomeNet

Database: Pfam
Entry: HTH_26
LinkDB: HTH_26
Original site: HTH_26 
#=GF ID   HTH_26
#=GF AC   PF13443.4
#=GF DE   Cro/C1-type HTH DNA-binding domain
#=GF AU   Coggill P
#=GF SE   Jackhmmer:Q2Y718
#=GF GA   22.00 22.00;
#=GF TC   22.00 22.00;
#=GF NC   21.90 21.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 17690987 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Helix-turn-helix
#=GF DR   INTERPRO; IPR001387;
#=GF CC   This is a helix-turn-helix domain that probably binds to DNA.
#=GF SQ   2889
#=GS R5CXA4_9BACT/7-69         AC R5CXA4.1
#=GS D9WC97_9ACTN/4-72         AC D9WC97.1
#=GS C0QD05_DESAH/9-70         AC C0QD05.1
#=GS K9TUE6_9CYAN/10-73        AC K9TUE6.1
#=GS Q8NQX8_CORGL/6-68         AC Q8NQX8.1
#=GS I0HE30_ACTM4/6-68         AC I0HE30.1
#=GS K9VQ16_9CYAN/5-68         AC K9VQ16.1
#=GS D4K7A2_9FIRM/48-101       AC D4K7A2.1
#=GS R5ALV7_9CLOT/5-67         AC R5ALV7.1
#=GS Q31LT1_SYNE7/6-69         AC Q31LT1.1
#=GS S5R6G8_9STRE/12-74        AC S5R6G8.1
#=GS R5VY05_9FIRM/10-69        AC R5VY05.1
#=GS F4QVE7_BREDI/1-60         AC F4QVE7.1
#=GS A0JQP9_LACS1/5-62         AC A0JQP9.1
#=GS K9V3I5_9CYAN/15-75        AC K9V3I5.1
#=GS A0A0D4DP39_9ACTN/4-71     AC A0A0D4DP39.1
#=GS R5J0K6_9FIRM/7-67         AC R5J0K6.1
#=GS B8I859_CLOCE/7-67         AC B8I859.1
#=GS A0A089KQE0_9BACL/8-71     AC A0A089KQE0.1
#=GS E1L2W0_9ACTN/7-66         AC E1L2W0.1
#=GS H3NEC7_9LACT/7-67         AC H3NEC7.1
#=GS G1UU53_9DELT/6-68         AC G1UU53.1
#=GS C7PBR9_CHIPD/6-68         AC C7PBR9.1
#=GS Q2N5R1_ERYLH/12-74        AC Q2N5R1.1
#=GS Q0RZY1_RHOJR/6-75         AC Q0RZY1.1
#=GS Q81P17_BACAN/6-68         AC Q81P17.1
#=GS A0A0M9GU12_9BACI/6-68     AC A0A0M9GU12.1
#=GS U2SSC7_9FIRM/16-76        AC U2SSC7.1
#=GS A0A0G3BRR9_9BURK/10-70    AC A0A0G3BRR9.1
#=GS R7QUY1_9FIRM/7-67         AC R7QUY1.1
#=GS R5LJR4_9FIRM/7-67         AC R5LJR4.1
#=GS A0A0M8PY28_9BACI/8-70     AC A0A0M8PY28.1
#=GS B5CQ33_9FIRM/6-65         AC B5CQ33.1
#=GS I1YRR1_PREI7/1-53         AC I1YRR1.1
#=GS G9RT55_9FIRM/6-68         AC G9RT55.1
#=GS D4ILH4_9BACT/19-78        AC D4ILH4.1
#=GS A4VUY1_STRSY/6-63         AC A4VUY1.1
#=GS A0A0A8UQA5_LEGHA/9-71     AC A0A0A8UQA5.1
#=GS A6NW83_9FIRM/9-69         AC A6NW83.1
#=GS X2GLP7_9BACI/9-71         AC X2GLP7.1
#=GS E2CJ36_9RHOB/23-78        AC E2CJ36.1
#=GS D1PQL0_9FIRM/5-67         AC D1PQL0.1
#=GS A0A0M9ZRF7_9ACTN/10-78    AC A0A0M9ZRF7.1
#=GS K0B3N3_CLOA9/9-71         AC K0B3N3.1
#=GS B8ICQ8_METNO/6-58         AC B8ICQ8.1
#=GS C7H2F5_9FIRM/7-67         AC C7H2F5.1
#=GS D9R6C9_CLOSW/7-67         AC D9R6C9.1
#=GS R6CU00_9BACE/6-67         AC R6CU00.1
#=GS F2JY73_MARM1/11-68        AC F2JY73.1
#=GS A0A0F0CK07_9CLOT/7-67     AC A0A0F0CK07.1
#=GS B1CB88_9FIRM/10-71        AC B1CB88.1
#=GS A4F764_SACEN/6-68         AC A4F764.1
#=GS R7I0Q1_9CLOT/4-61         AC R7I0Q1.1
#=GS R6N5R9_9CLOT/7-67         AC R6N5R9.1
#=GS J3CYJ8_9BURK/10-70        AC J3CYJ8.1
#=GS D4J9C9_9FIRM/7-67         AC D4J9C9.1
#=GS A0A023CTA1_GEOSE/6-68     AC A0A023CTA1.1
#=GS A5WD97_PSYWF/20-82        AC A5WD97.1
#=GS A0A0M2VVI8_9BACL/6-68     AC A0A0M2VVI8.1
#=GS C8W4J5_DESAS/6-67         AC C8W4J5.1
#=GS R6H426_9FIRM/6-68         AC R6H426.1
#=GS G5INT8_9CLOT/6-68         AC G5INT8.1
#=GS E7GNV9_CLOSY/6-65         AC E7GNV9.1
#=GS K9ZCA4_ANACC/9-72         AC K9ZCA4.1
#=GS K9VTU9_9CYAN/16-67        AC K9VTU9.1
#=GS R5QTW6_9FIRM/6-68         AC R5QTW6.1
#=GS A0A0F2PSB3_9FIRM/7-66     AC A0A0F2PSB3.1
#=GS R6I334_9FIRM/7-67         AC R6I334.1
#=GS C8W285_DESAS/7-66         AC C8W285.1
#=GS D1AHF6_SEBTE/96-163       AC D1AHF6.1
#=GS K9VW08_9CYAN/7-69         AC K9VW08.1
#=GS R6AY58_9CLOT/7-65         AC R6AY58.1
#=GS C8VWK3_DESAS/6-68         AC C8VWK3.1
#=GS G9WQ91_9FIRM/16-80        AC G9WQ91.1
#=GS I1AR12_9RHOB/27-84        AC I1AR12.1
#=GS A0A0J7ZJW2_STRVR/11-79    AC A0A0J7ZJW2.1
#=GS K4ZRI8_PAEAL/5-67         AC K4ZRI8.1
#=GS R6IDU2_9FIRM/7-69         AC R6IDU2.1
#=GS A0A0F4QWV1_9GAMM/6-68     AC A0A0F4QWV1.1
#=GS R6TUZ2_9FIRM/7-67         AC R6TUZ2.1
#=GS A0A0G3GUK0_9CORY/6-66     AC A0A0G3GUK0.1
#=GS R6CHM8_9BACE/1-61         AC R6CHM8.1
#=GS B9YD44_9FIRM/7-67         AC B9YD44.1
#=GS A6CJP8_9BACI/6-68         AC A6CJP8.1
#=GS K2BQJ3_9BACT/65-127       AC K2BQJ3.1
#=GS A0A0F3LIT9_9CAUL/5-67     AC A0A0F3LIT9.1
#=GS K4LCD5_9FIRM/6-65         AC K4LCD5.1
#=GS C8WHB6_EGGLE/6-68         AC C8WHB6.1
#=GS R6EKS3_9FIRM/10-69        AC R6EKS3.1
#=GS G8LUR3_CLOCD/7-67         AC G8LUR3.1
#=GS F2BXT2_9FIRM/8-70         AC F2BXT2.1
#=GS E4L0F6_9FIRM/1-31         AC E4L0F6.1
#=GS D3D600_9ACTN/6-68         AC D3D600.1
#=GS A0A0N1LIR9_9CAUL/6-68     AC A0A0N1LIR9.1
#=GS H1PKZ7_9FIRM/7-67         AC H1PKZ7.1
#=GS K9VT65_9CYAN/12-75        AC K9VT65.1
#=GS T2LE90_9GAMM/10-70        AC T2LE90.1
#=GS J5WCW3_9FIRM/7-67         AC J5WCW3.1
#=GS R5BE92_9CLOT/7-67         AC R5BE92.1
#=GS A5Z724_9FIRM/17-77        AC A5Z724.1
#=GS D6TQH3_9CHLR/1-51         AC D6TQH3.1
#=GS R5K9X1_9CLOT/7-67         AC R5K9X1.1
#=GS G8MG56_9BURK/21-76        AC G8MG56.1
#=GS F4GJZ2_SPHCD/6-66         AC F4GJZ2.1
#=GS L0F446_DESDL/6-68         AC L0F446.1
#=GS C0D8F1_9FIRM/7-65         AC C0D8F1.1
#=GS A0A0M2VSI9_9BACL/5-68     AC A0A0M2VSI9.1
#=GS A0A0K8P2R8_9BURK/10-70    AC A0A0K8P2R8.1
#=GS D4JS86_9FIRM/6-67         AC D4JS86.1
#=GS Q8DMF7_THEEB/4-64         AC Q8DMF7.1
#=GS R5CB66_9BACE/6-64         AC R5CB66.1
#=GS A0A0B5AH56_9BACL/6-68     AC A0A0B5AH56.1
#=GS R5BER3_9BACE/4-63         AC R5BER3.1
#=GS Q18AA2_PEPD6/6-65         AC Q18AA2.1
#=GS L0F1F5_DESDL/7-67         AC L0F1F5.1
#=GS D4M0G9_9FIRM/7-67         AC D4M0G9.1
#=GS Q5WE19_BACSK/6-74         AC Q5WE19.1
#=GS R6IC08_9FIRM/10-70        AC R6IC08.1
#=GS R5FL08_9FIRM/8-67         AC R5FL08.1
#=GS A0A0F0C6X4_9CLOT/7-65     AC A0A0F0C6X4.1
#=GS F7V504_CLOSS/27-87        AC F7V504.1
#=GS A0A0N0D6T1_9DELT/5-72     AC A0A0N0D6T1.1
#=GS D1VRV2_9FIRM/5-67         AC D1VRV2.1
#=GS R5NRG9_9PORP/6-68         AC R5NRG9.1
#=GS K0JR99_SACES/6-68         AC K0JR99.1
#=GS V9W929_9BACL/5-67         AC V9W929.1
#=GS A0A0D4DGT1_9ACTN/12-74    AC A0A0D4DGT1.1
#=GS R7EUT1_9FIRM/2-66         AC R7EUT1.1
#=GS C6J0S8_9BACL/7-69         AC C6J0S8.1
#=GS A0A0F2SEK7_9FIRM/10-70    AC A0A0F2SEK7.1
#=GS R5BWY6_9FIRM/7-68         AC R5BWY6.1
#=GS A0A0F4QUG4_9GAMM/15-68    AC A0A0F4QUG4.1
#=GS A0A0B1XZ67_9BACI/6-68     AC A0A0B1XZ67.1
#=GS C0C440_9FIRM/7-66         AC C0C440.1
#=GS R6KMB8_9BACE/5-67         AC R6KMB8.1
#=GS D4L066_9FIRM/43-103       AC D4L066.1
#=GS E6MH06_9FIRM/6-60         AC E6MH06.1
#=GS Q5LQB2_RUEPO/20-78        AC Q5LQB2.1
#=GS R6DSA5_9FIRM/10-70        AC R6DSA5.1
#=GS A0A0A1GZ81_9LACO/6-67     AC A0A0A1GZ81.1
#=GS K5A3F8_PAEAL/6-68         AC K5A3F8.1
#=GS D4KY35_9FIRM/7-67         AC D4KY35.1
#=GS R5CWB5_9FIRM/10-70        AC R5CWB5.1
#=GS F8EHW4_RUNSL/6-68         AC F8EHW4.1
#=GS R6PF49_9FIRM/6-68         AC R6PF49.1
#=GS R6UDB9_9CLOT/10-70        AC R6UDB9.1
#=GS D4LVH6_9FIRM/7-66         AC D4LVH6.1
#=GS G5IJL6_9CLOT/7-65         AC G5IJL6.1
#=GS K9SR78_9SYNE/7-70         AC K9SR78.1
#=GS R6HTW1_9FIRM/2-66         AC R6HTW1.1
#=GS A1SBX7_NOCSJ/4-72         AC A1SBX7.1
#=GS A3X4E1_9RHOB/29-88        AC A3X4E1.1
#=GS Q2SF66_HAHCH/9-65         AC Q2SF66.1
#=GS F0T1T4_SYNGF/2-66         AC F0T1T4.1
#=GS A0KGX0_AERHH/6-68         AC A0KGX0.1
#=GS F2R231_STRVP/6-68         AC F2R231.1
#=GS G2PIA9_MURRD/6-67         AC G2PIA9.1
#=GS D7WC13_9CORY/4-64         AC D7WC13.1
#=GS E0NJW1_9FIRM/7-67         AC E0NJW1.1
#=GS Q81E15_BACCR/9-71         AC Q81E15.1
#=GS J6UDR7_9RHOB/38-88        AC J6UDR7.1
#=GS A9KT17_CLOPH/6-68         AC A9KT17.1
#=GS A0A0F4QW32_9GAMM/12-72    AC A0A0F4QW32.1
#=GS G5K535_9STRE/8-68         AC G5K535.1
#=GS E7GBF8_9FIRM/11-73        AC E7GBF8.1
#=GS R5JZG5_9FIRM/17-75        AC R5JZG5.1
#=GS C5NUN7_9BACL/9-67         AC C5NUN7.1
#=GS Q3L9G9_RHOE4/6-75         AC Q3L9G9.1
#=GS B0TGG8_HELMI/7-67         AC B0TGG8.1
#=GS A0A0F2RLE7_9RHOB/6-68     AC A0A0F2RLE7.1
#=GS Q9A0Z3_STRP1/7-67         AC Q9A0Z3.1
#=GS B9TGR6_RICCO/20-80        AC B9TGR6.1
#=GS A0A059VV21_STRA9/6-68     AC A0A059VV21.1
#=GS A0A0C2YDD8_BACBA/7-70     AC A0A0C2YDD8.1
#=GS J8VRL6_9SPHN/13-75        AC J8VRL6.1
#=GS G5IEJ2_9CLOT/7-66         AC G5IEJ2.1
#=GS A0A0F4J387_9ACTN/6-68     AC A0A0F4J387.1
#=GS D6D8X5_BIFLN/6-68         AC D6D8X5.1
#=GS A0A0D6JAT7_9RHIZ/1-52     AC A0A0D6JAT7.1
#=GS A0A0H4KI22_9BACI/4-64     AC A0A0H4KI22.1
#=GS R6YIU4_9FIRM/2-66         AC R6YIU4.1
#=GS D0YZT5_PHODD/6-66         AC D0YZT5.1
#=GS K4ZHM7_PAEAL/6-66         AC K4ZHM7.1
#=GS V6SF45_9FLAO/6-68         AC V6SF45.1
#=GS R6J1L1_9FIRM/6-66         AC R6J1L1.1
#=GS R5HV68_9FIRM/1-56         AC R5HV68.1
#=GS A0A0N0K097_9SPHN/1-51     AC A0A0N0K097.1
#=GS A0A0F4NUC4_PSEO7/17-77    AC A0A0F4NUC4.1
#=GS R7G1Q7_9PROT/4-64         AC R7G1Q7.1
#=GS R5ZX24_9BACT/8-61         AC R5ZX24.1
#=GS D7N7E9_9FIRM/7-67         AC D7N7E9.1
#=GS K6UB02_9CLOT/8-68         AC K6UB02.1
#=GS R5LE37_9FIRM/7-65         AC R5LE37.1
#=GS A0A0A8EYP7_9ACTN/6-68     AC A0A0A8EYP7.1
#=GS B3E7Z3_GEOLS/5-73         AC B3E7Z3.1
#=GS W0IWF9_9BACT/8-64         AC W0IWF9.1
#=GS Q5WLM6_BACSK/9-71         AC Q5WLM6.1
#=GS R6YUX5_9FIRM/8-68         AC R6YUX5.1
#=GS A0A085BWH4_9RHOB/29-86    AC A0A085BWH4.1
#=GS K6X1H3_9ALTE/1-39         AC K6X1H3.1
#=GS C0D1W0_9FIRM/6-68         AC C0D1W0.1
#=GS R6K0W3_9CLOT/6-68         AC R6K0W3.1
#=GS D1BH43_SANKS/13-75        AC D1BH43.1
#=GS R7PSG3_9FIRM/7-67         AC R7PSG3.1
#=GS G6FT35_9CYAN/9-71         AC G6FT35.1
#=GS D9RA66_CLOSW/7-67         AC D9RA66.1
#=GS K9XQF9_STAC7/1-57         AC K9XQF9.1
#=GS Q7UL15_RHOBA/17-62        AC Q7UL15.1
#=GS A0A0F2JD42_9FIRM/6-68     AC A0A0F2JD42.1
#=GS R5TG82_9CLOT/6-68         AC R5TG82.1
#=GS I7EN74_PHAIB/21-81        AC I7EN74.1
#=GS R5E392_9FIRM/7-67         AC R5E392.1
#=GS F5Y6M4_TREAZ/9-68         AC F5Y6M4.1
#=GS A0A0D5AEX2_9NOCA/13-74    AC A0A0D5AEX2.1
#=GS K1X1U7_9BACT/6-68         AC K1X1U7.1
#=GS R7ETN6_9FIRM/8-70         AC R7ETN6.1
#=GS A0A0G0JQA0_9BACT/103-163  AC A0A0G0JQA0.1
#=GS R5IKJ5_9CLOT/2-66         AC R5IKJ5.1
#=GS F4XHP5_9FIRM/7-67         AC F4XHP5.2
#=GS B8I1S0_CLOCE/6-68         AC B8I1S0.1
#=GS U2S350_9FIRM/6-66         AC U2S350.1
#=GS R6QFZ8_9FIRM/1-68         AC R6QFZ8.1
#=GS A4CF11_9GAMM/10-70        AC A4CF11.1
#=GS N0B5R1_9BACI/8-71         AC N0B5R1.1
#=GS U5W184_9ACTN/6-68         AC U5W184.1
#=GS G0AAE9_COLFT/6-68         AC G0AAE9.1
#=GS A0A0B5FLC3_9DELT/31-83    AC A0A0B5FLC3.1
#=GS A0A0M2VXR2_9BACL/6-68     AC A0A0M2VXR2.1
#=GS K2AQ08_9BACT/6-68         AC K2AQ08.1
#=GS R7H962_9FIRM/6-64         AC R7H962.1
#=GS F5YBH3_TREAZ/6-66         AC F5YBH3.1
#=GS F4XHX2_9FIRM/5-67         AC F4XHX2.1
#=GS R5HE67_9MOLU/10-71        AC R5HE67.1
#=GS A0A0N1GVK4_9ACTN/6-75     AC A0A0N1GVK4.1
#=GS R6TJ19_9FIRM/7-67         AC R6TJ19.1
#=GS R5NCN0_9CLOT/10-69        AC R5NCN0.1
#=GS H6NFV7_9BACL/6-68         AC H6NFV7.1
#=GS U2R9N1_9FIRM/5-67         AC U2R9N1.1
#=GS D4JV69_9FIRM/7-67         AC D4JV69.1
#=GS G2KM66_MICAA/10-73        AC G2KM66.1
#=GS H5TWV7_9ACTN/10-78        AC H5TWV7.1
#=GS Q7NNN9_GLOVI/16-79        AC Q7NNN9.1
#=GS J6HC45_9FIRM/7-71         AC J6HC45.1
#=GS Q9I058_PSEAE/6-68         AC Q9I058.1
#=GS R6ZLI0_9FIRM/6-66         AC R6ZLI0.1
#=GS X4ZUW5_9BACL/10-70        AC X4ZUW5.1
#=GS B5HBW2_STRPR/6-68         AC B5HBW2.1
#=GS A5UJ53_METS3/10-71        AC A5UJ53.1
#=GS D4IPY7_9BACT/1-59         AC D4IPY7.1
#=GS U5RT78_9CLOT/6-68         AC U5RT78.1
#=GS R5QIC4_9FIRM/8-67         AC R5QIC4.1
#=GS T0TD79_9STRE/6-66         AC T0TD79.1
#=GS R5TR22_9CLOT/7-69         AC R5TR22.1
#=GS A0A068QUL0_9ENTR/6-68     AC A0A068QUL0.1
#=GS K4ZSY5_PAEAL/8-65         AC K4ZSY5.1
#=GS D9WA44_9ACTN/6-68         AC D9WA44.1
#=GS A0A0D8Q5C4_9GAMM/6-68     AC A0A0D8Q5C4.1
#=GS A5P6R0_9SPHN/6-68         AC A5P6R0.1
#=GS D3EHR3_GEOS4/5-74         AC D3EHR3.1
#=GS R6VV21_9FIRM/10-69        AC R6VV21.1
#=GS R6RVP1_9CLOT/5-64         AC R6RVP1.1
#=GS E6U579_ETHHY/6-66         AC E6U579.1
#=GS H2BXR9_9FLAO/6-68         AC H2BXR9.1
#=GS I9WD21_9SPHN/14-76        AC I9WD21.1
#=GS C5CG96_KOSOT/6-68         AC C5CG96.1
#=GS G5ID88_9CLOT/6-66         AC G5ID88.1
#=GS R5YBL7_9FIRM/6-68         AC R5YBL7.1
#=GS R6BZG8_9FIRM/8-66         AC R6BZG8.1
#=GS W6RUR3_9CLOT/6-68         AC W6RUR3.1
#=GS E7GQI0_CLOSY/6-67         AC E7GQI0.1
#=GS R2SFZ3_9ENTE/6-67         AC R2SFZ3.1
#=GS R5F682_9CLOT/6-66         AC R5F682.1
#=GS R5AQL1_9CLOT/11-72        AC R5AQL1.1
#=GS D2S7H7_GEOOG/6-68         AC D2S7H7.1
#=GS R5CAV2_9FIRM/7-69         AC R5CAV2.1
#=GS D8K1J3_DEHLB/7-67         AC D8K1J3.1
#=GS R7EGU3_9BACE/12-71        AC R7EGU3.1
#=GS R6FF78_9FIRM/3-66         AC R6FF78.1
#=GS A0A0G0KA34_9BACT/21-73    AC A0A0G0KA34.1
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A0A0C5X1M7_9GAMM/40-97               ....................................i--KRELK..KH.....GI...NYRAL.........S......T............QLG..........I.S.D.V..S.IK....R.LL....N..N..Q.........-.........Q...PL.SM.....QRL.I.A..I..C...QLI......D........V..P..LSNLLV----e.......................
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F2NY80_TRES6/44-105                  .....................................KLWARYK..EM.....GH..kNKTDL.........I......E............MAG..........I.S.T.N..I.LA....K.LT....K..G..E.........-.........-...FI.SM.....DSI.Q.R..I..C...KAL......N........C..D..VGDICVIN--kv......................
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