GenomeNet

Database: Pfam
Entry: He_PIG_assoc
LinkDB: He_PIG_assoc
Original site: He_PIG_assoc 
#=GF ID   He_PIG_assoc
#=GF AC   PF10632.4
#=GF DE   He_PIG associated, NEW1 domain of bacterial glycohydrolase
#=GF AU   Naumoff D, Coggill P
#=GF SE   Pfam-B_97991 (release 22.0)
#=GF GA   25.00 25.00;
#=GF TC   25.90 25.10;
#=GF NC   22.70 21.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   15285616
#=GF RT   [Phylogenetic analysis of alpha-galactosidases of the GH27
#=GF RT   family]. 
#=GF RA   Naumov DG; 
#=GF RL   Mol Biol (Mosk). 2004;38:463-476.
#=GF RN   [2]
#=GF RM   16131397
#=GF RT   GH97 is a new family of glycoside hydrolases, which is related
#=GF RT   to the alpha-galactosidase superfamily. 
#=GF RA   Naumoff DG; 
#=GF RL   BMC Genomics. 2005;6:112.
#=GF DR   INTERPRO; IPR019599;
#=GF CC   The English-language version of the first reference can be found
#=GF CC   on pages 388-399 of the above. This domain has been named NEW1
#=GF CC   but its actual function is not known. It is found on proteins
#=GF CC   which are bacterial galactosidases [1]. The domain is associated
#=GF CC   with the He_PIG family, Pfam:PF05345, a putative Ig-containing
#=GF CC   domain.
#=GF SQ   47
#=GS D1W7K8_9BACT/268-296  AC D1W7K8.1
#=GS F0S4X1_PEDSD/42-70    AC F0S4X1.1
#=GS H1DDL1_9PORP/31-59    AC H1DDL1.1
#=GS B3CFN7_9BACE/196-224  AC B3CFN7.1
#=GS E4W1I9_BACFG/1-21     AC E4W1I9.1
#=GS C6I3Z8_9BACE/36-64    AC C6I3Z8.1
#=GS F0S5F3_PEDSD/189-217  AC F0S5F3.1
#=GS Q64N08_BACFR/36-64    AC Q64N08.1
#=GS E1WQR7_BACF6/36-64    AC E1WQR7.1
#=GS Q8A1R7_BACTN/192-220  AC Q8A1R7.1
#=GS C6IHL4_9BACE/40-68    AC C6IHL4.1
#=GS Q8A389_BACTN/40-68    AC Q8A389.1
#=GS C6XVI1_PEDHD/44-72    AC C6XVI1.1
#=GS E5CAS9_9BACE/188-216  AC E5CAS9.2
#=GS F8EMB8_RUNSL/205-233  AC F8EMB8.1
#=GS C6IP96_9BACE/192-220  AC C6IP96.1
#=GS B3C9C0_9BACE/192-220  AC B3C9C0.1
#=GS F3PK11_9BACE/65-93    AC F3PK11.1
#=GS F7LVC3_9BACE/36-64    AC F7LVC3.1
#=GS E7RNA0_9BACT/316-344  AC E7RNA0.1
#=GS H1XWZ7_9BACT/318-346  AC H1XWZ7.1
#=GS C6Y1U1_PEDHD/191-219  AC C6Y1U1.1
#=GS E5UWM5_9BACE/39-67    AC E5UWM5.1
#=GS D1JVF2_9BACE/36-64    AC D1JVF2.1
#=GS B1ZN49_OPITP/44-72    AC B1ZN49.1
#=GS B9TF41_RICCO/287-315  AC B9TF41.1
#=GS F4KQM3_HALH1/187-215  AC F4KQM3.1
#=GS D7W1J5_9FLAO/188-216  AC D7W1J5.1
#=GS F8X2N1_9PORP/196-224  AC F8X2N1.1
#=GS G9IS45_9BACT/44-72    AC G9IS45.1
#=GS B2URC7_AKKM8/45-73    AC B2URC7.1
#=GS C6Y1U3_PEDHD/174-202  AC C6Y1U3.1
#=GS C6Y1G1_PEDHD/58-86    AC C6Y1G1.1
#=GS F7LN94_9BACE/36-64    AC F7LN94.1
#=GS E2NCR5_9BACE/192-220  AC E2NCR5.1
#=GS H1YFU2_9SPHI/193-221  AC H1YFU2.1
#=GS Q5LFG6_BACFN/36-64    AC Q5LFG6.1
#=GS F4KQM5_HALH1/189-217  AC F4KQM5.1
#=GS D7IDX6_9BACE/40-68    AC D7IDX6.1
#=GS D1JKE7_9BACE/36-64    AC D1JKE7.1
#=GS E1WT83_BACF6/36-64    AC E1WT83.1
#=GS Q64W90_BACFR/36-64    AC Q64W90.1
#=GS D2EUN3_9BACE/187-215  AC D2EUN3.1
#=GS G8TAB6_NIAKG/41-69    AC G8TAB6.1
#=GS Q5L7T7_BACFN/36-64    AC Q5L7T7.1
#=GS E2NIK2_9BACE/196-224  AC E2NIK2.1
#=GS C6IB64_9BACE/36-64    AC C6IB64.1
D1W7K8_9BACT/268-296             PRINSAAVMGVRPGSPVIFRIPASGDRPM
F0S4X1_PEDSD/42-70               PKINGAKVFGVRPGHPIIYTIPTSGLRPM
H1DDL1_9PORP/31-59               PRINAPYVTGNYPHTEFVFAVPTSGERPM
B3CFN7_9BACE/196-224             PRINNPLVYGARPGNPFLMTIMASGNRPM
E4W1I9_BACFG/1-21                --------MGNYPATPFLFYIPTSGERPI
C6I3Z8_9BACE/36-64               PRINSPHIIGNYPSTPFIFYIPTSGQRPM
F0S5F3_PEDSD/189-217             PRINSASVYGVRPGSPFLFRIPATGERPM
Q64N08_BACFR/36-64               PCINPPHVVGNYPATPFLFYIPTSGERPI
E1WQR7_BACF6/36-64               PCINPPHVVGNYPATPFLFYIPTSGERPI
Q8A1R7_BACTN/192-220             PQINNPLTYGARPGNPFLMPIMVSGKRPM
C6IHL4_9BACE/40-68               PCINSPRAIGNYPASPFLFYIPTTGQRPM
Q8A389_BACTN/40-68               PCINSPRAIGNYPASPFLFYIPTTGQRPM
C6XVI1_PEDHD/44-72               PRINGARIFGLRPGSAFLYTIPATGIRPM
E5CAS9_9BACE/188-216             PMINAPYIYGARPGNPFLFTVPVSGERPL
F8EMB8_RUNSL/205-233             PRINSAGVFGATPNNPFLYTIAATGERPM
C6IP96_9BACE/192-220             PQINNPLTYGARPGNPFLMPIMVSGKRPM
B3C9C0_9BACE/192-220             PRINGAFVFGVRPGSPFQYQIAATGDRPM
F3PK11_9BACE/65-93               PRINGAKVFGVRPGSQFLYTIPATGIRPM
F7LVC3_9BACE/36-64               PCINPPHVVGNYPATPFLFYIPTSGERPI
E7RNA0_9BACT/316-344             PRINSAERFGVRPESPVIYRIPASGERPM
H1XWZ7_9BACT/318-346             PQINYPRVYGQRTGKPFLFRIPVSGQRPI
C6Y1U1_PEDHD/191-219             PKINSAKVFGASPGNPVLYTIAATGRRPM
E5UWM5_9BACE/39-67               PQINPPSIIGNYPSTPFLFYIPTLGERPM
D1JVF2_9BACE/36-64               PCINPPHVVGNYPATPFLFYIPTSGERPI
B1ZN49_OPITP/44-72               PRINGASVFGVRPGAPFLYAIPATGQRPM
B9TF41_RICCO/287-315             PKINGADVYGARPGNPFLYLIPATGKKPL
F4KQM3_HALH1/187-215             PRINSPKVFGARPGNPFLYTIAATGQAPI
D7W1J5_9FLAO/188-216             PKINSAGVYGVRPGSPFLFRVAATGDRPM
F8X2N1_9PORP/196-224             PIINNPLVYGARPGNPFLWTIMATGQRPM
G9IS45_9BACT/44-72               PRINGPLVYGCRLGSPFLYRIPCQGERPI
B2URC7_AKKM8/45-73               PSINGARIVGATPGSRMLFQVPVSGERPM
C6Y1U3_PEDHD/174-202             PKINSAAVFGARPGNPFLYTIAATGERPL
C6Y1G1_PEDHD/58-86               PRINGPRVFGVRPNHPILFTIPASGNRPM
F7LN94_9BACE/36-64               PRINSPHIIGNYPSTPFIFYIPTSGQRPM
E2NCR5_9BACE/192-220             PRINGASVFGVRPGSPFQYQIAATGDRPM
H1YFU2_9SPHI/193-221             PKINSASVFGVRPGSPFQFLVAATGDRPM
Q5LFG6_BACFN/36-64               PRINSPHIIGNYPSTPFIFYIPTSGQRPM
F4KQM5_HALH1/189-217             PRINSAKIFGATPGNPVLYTIAATGEKPI
D7IDX6_9BACE/40-68               PCINSPRAIGNYPASPFLFYIPTTGQRPM
D1JKE7_9BACE/36-64               PRINSPHIIGNYPSTPFIFYIPTSGQRPM
E1WT83_BACF6/36-64               PRINSPHIIGNYPSTPFIFYIPTSGQRPM
Q64W90_BACFR/36-64               PRINSPHITGNYPSTPFIFYIPTSGQRPM
D2EUN3_9BACE/187-215             PVINNPLVYGARPGNPFLWSVMATGNRPM
G8TAB6_NIAKG/41-69               PKINGPVVFGVRPGHPILFTIPATGTRPM
Q5L7T7_BACFN/36-64               PCINPPHVVGNYPATPFLFYIPTSGERPI
E2NIK2_9BACE/196-224             PRINNPLVYGARPGNPFLMTIMASGNRPM
C6IB64_9BACE/36-64               PCINPPHVVGNYPATPFLFYIPTSGERPI
#=GC seq_cons                    P+INuPpVhGspPuoPFLahIPsoGpRPM
//
DBGET integrated database retrieval system