GenomeNet

Database: Pfam
Entry: He_PIG_assoc
LinkDB: He_PIG_assoc
Original site: He_PIG_assoc 
#=GF ID   He_PIG_assoc
#=GF AC   PF10632.7
#=GF DE   He_PIG associated, NEW1 domain of bacterial glycohydrolase
#=GF AU   Naumoff D, Coggill P
#=GF SE   Pfam-B_97991 (release 22.0)
#=GF GA   25.00 25.00;
#=GF TC   30.80 30.80;
#=GF NC   22.50 16.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 17690987 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   15285616
#=GF RT   [Phylogenetic analysis of alpha-galactosidases of the GH27
#=GF RT   family]. 
#=GF RA   Naumov DG; 
#=GF RL   Mol Biol (Mosk). 2004;38:463-476.
#=GF RN   [2]
#=GF RM   16131397
#=GF RT   GH97 is a new family of glycoside hydrolases, which is related
#=GF RT   to the alpha-galactosidase superfamily. 
#=GF RA   Naumoff DG; 
#=GF RL   BMC Genomics. 2005;6:112.
#=GF DR   INTERPRO; IPR019599;
#=GF CC   The English-language version of the first reference can be found
#=GF CC   on pages 388-399 of the above. This domain has been named NEW1
#=GF CC   but its actual function is not known. It is found on proteins
#=GF CC   which are bacterial galactosidases [1]. The domain is associated
#=GF CC   with the He_PIG family, Pfam:PF05345, a putative Ig-containing
#=GF CC   domain.
#=GF SQ   46
#=GS F0S4X1_PSESL/42-70        AC F0S4X1.1
#=GS R5INE1_9PORP/33-61        AC R5INE1.1
#=GS R6M6D8_9BACE/65-93        AC R6M6D8.1
#=GS I2EXN3_EMTOG/185-213      AC I2EXN3.1
#=GS F0S5F3_PSESL/189-217      AC F0S5F3.1
#=GS R6X6I1_9BACT/48-76        AC R6X6I1.1
#=GS Q8A1R7_BACTN/192-220      AC Q8A1R7.1
#=GS G2LJP2_CHLTF/58-86        AC G2LJP2.1
#=GS R6FEQ0_9BACE/194-222      AC R6FEQ0.1
#=GS Q8A389_BACTN/40-68        AC Q8A389.1
#=GS C6XVI1_PEDHD/44-72        AC C6XVI1.1
#=GS F8EMB8_RUNSL/205-233      AC F8EMB8.1
#=GS R5PB58_9BACT/285-313      AC R5PB58.1
#=GS E7RNA0_9BACT/316-344      AC E7RNA0.1
#=GS H1XWZ7_9BACT/318-346      AC H1XWZ7.1
#=GS R5IIC5_9PORP/194-222      AC R5IIC5.1
#=GS C6Y1U1_PEDHD/191-219      AC C6Y1U1.1
#=GS R7EDU1_9BACE/187-215      AC R7EDU1.1
#=GS B1ZN49_OPITP/44-72        AC B1ZN49.1
#=GS A0A068NPC8_9BACT/184-211  AC A0A068NPC8.1
#=GS B9TF41_RICCO/287-315      AC B9TF41.1
#=GS F4KQM3_HALH1/187-215      AC F4KQM3.1
#=GS F8X2N1_9PORP/196-224      AC F8X2N1.1
#=GS B2URC7_AKKM8/45-73        AC B2URC7.1
#=GS H1YCG5_9SPHI/288-316      AC H1YCG5.1
#=GS R6K6D9_9BACE/196-224      AC R6K6D9.1
#=GS C6Y1U3_PEDHD/174-202      AC C6Y1U3.1
#=GS G9RU98_9FIRM/13-41        AC G9RU98.1
#=GS R6KIE4_9BACE/188-216      AC R6KIE4.1
#=GS R5UTA4_9PORP/31-59        AC R5UTA4.1
#=GS C6Y1G1_PEDHD/58-86        AC C6Y1G1.1
#=GS W0RNJ1_9BACT/214-242      AC W0RNJ1.1
#=GS H1YFU2_9SPHI/193-221      AC H1YFU2.1
#=GS Q5LFG6_BACFN/36-64        AC Q5LFG6.1
#=GS Q5LFG6_BACFN/36-64        DR PDB; 4NZJ A; 36-64;
#=GS I2EXN1_EMTOG/190-218      AC I2EXN1.1
#=GS E4T4X7_PALPW/195-223      AC E4T4X7.1
#=GS F4KQM5_HALH1/189-217      AC F4KQM5.1
#=GS R6Z296_9BACT/191-219      AC R6Z296.1
#=GS A0A095ZNU6_9BACT/268-296  AC A0A095ZNU6.1
#=GS R5C3M6_9BACE/192-220      AC R5C3M6.1
#=GS A0A0A1S3Z7_9FLAO/186-214  AC A0A0A1S3Z7.1
#=GS S0EUN2_CHTCT/208-236      AC S0EUN2.1
#=GS J3C9T2_9FLAO/187-215      AC J3C9T2.1
#=GS G8TAB6_NIAKG/41-69        AC G8TAB6.1
#=GS Q5L7T7_BACFN/36-64        AC Q5L7T7.1
#=GS Q5L7T7_BACFN/36-64        DR PDB; 4OGZ B; 36-64;
#=GS Q5L7T7_BACFN/36-64        DR PDB; 4OGZ A; 36-64;
#=GS R5RYG8_9BACE/45-73        AC R5RYG8.1
F0S4X1_PSESL/42-70                   .PKINGAKVFGVRPGHPIIYTIPTSGLRPM.
R5INE1_9PORP/33-61                   .PYINPPYVTAIYPNTDFVFAIPTSGERPM.
R6M6D8_9BACE/65-93                   .PRINGAKVFGVRPGSQFLYTIPATGIRPM.
I2EXN3_EMTOG/185-213                 .PKINSPKLFGARPNNPFLYTIAATGERPM.
F0S5F3_PSESL/189-217                 .PRINSASVYGVRPGSPFLFRIPATGERPM.
R6X6I1_9BACT/48-76                   .PRINGAKIYGARPGSDFLYKVAATGDRPM.
Q8A1R7_BACTN/192-220                 .PQINNPLTYGARPGNPFLMPIMVSGKRPM.
G2LJP2_CHLTF/58-86                   .PRLNGPRVVGTTPGREFIYRLPVTGAAPL.
R6FEQ0_9BACE/194-222                 .PRINCALVFGVRPGSPFQFLVATTGDRPM.
Q8A389_BACTN/40-68                   .PCINSPRAIGNYPASPFLFYIPTTGQRPM.
C6XVI1_PEDHD/44-72                   .PRINGARIFGLRPGSAFLYTIPATGIRPM.
F8EMB8_RUNSL/205-233                 .PRINSAGVFGATPNNPFLYTIAATGERPM.
R5PB58_9BACT/285-313                 .PRYNGPLVYGVRPGSPVIFRIPVSGERPM.
E7RNA0_9BACT/316-344                 .PRINSAERFGVRPESPVIYRIPASGERPM.
H1XWZ7_9BACT/318-346                 .PQINYPRVYGQRTGKPFLFRIPVSGQRPI.
R5IIC5_9PORP/194-222                 .PRINAPYIHGARPGNPFLFNLPISGERPL.
C6Y1U1_PEDHD/191-219                 .PKINSAKVFGASPGNPVLYTIAATGRRPM.
R7EDU1_9BACE/187-215                 .PVINNPLVYGARPGNPFLWSVMATGNRPM.
B1ZN49_OPITP/44-72                   .PRINGASVFGVRPGAPFLYAIPATGQRPM.
A0A068NPC8_9BACT/184-211             e--INGPRVVGGTPGRDFLFRIPASGKRPL.
B9TF41_RICCO/287-315                 .PKINGADVYGARPGNPFLYLIPATGKKPL.
F4KQM3_HALH1/187-215                 .PRINSPKVFGARPGNPFLYTIAATGQAPI.
F8X2N1_9PORP/196-224                 .PIINNPLVYGARPGNPFLWTIMATGQRPM.
B2URC7_AKKM8/45-73                   .PSINGARIVGATPGSRMLFQVPVSGERPM.
H1YCG5_9SPHI/288-316                 .PVINSAAVLGVKALHPILYRIPVSGSKPI.
R6K6D9_9BACE/196-224                 .PRINNPLVYGARPGNPFLMTIMVSGNRPM.
C6Y1U3_PEDHD/174-202                 .PKINSAAVFGARPGNPFLYTIAATGERPL.
G9RU98_9FIRM/13-41                   .PRFTAPSVFCAAPGKPFLYRIPVLGKRPI.
R6KIE4_9BACE/188-216                 .PRINGASVFGVRPGSPFQYQIAATGDRPM.
R5UTA4_9PORP/31-59                   .PRINAPYVTGNYPHTEFVFAVPTSGERPM.
C6Y1G1_PEDHD/58-86                   .PRINGPRVFGVRPNHPILFTIPASGNRPM.
W0RNJ1_9BACT/214-242                 .PRINGPSLTGVTPGHDVLYRIPVSGTRPM.
H1YFU2_9SPHI/193-221                 .PKINSASVFGVRPGSPFQFLVAATGDRPM.
Q5LFG6_BACFN/36-64                   .PRINSPHIIGNYPSTPFIFYIPTSGQRPM.
#=GR Q5LFG6_BACFN/36-64        SS    .-EE-S--EEEE-TTSEEEEE--EESSSS-.
I2EXN1_EMTOG/190-218                 .PKINSAKLFGATPNNPFLYTIAATGERPM.
E4T4X7_PALPW/195-223                 .PKITGAKVFGVRPGSPFQYLVTATGDRPM.
F4KQM5_HALH1/189-217                 .PRINSAKIFGATPGNPVLYTIAATGEKPI.
R6Z296_9BACT/191-219                 .PQINNPLVYGARPGNPFLMPVMASGKRPM.
A0A095ZNU6_9BACT/268-296             .PRINSAAVMGVRPGSPVIFRIPASGDRPM.
R5C3M6_9BACE/192-220                 .PVINNPLVFGARPGNPFLWSVMATGNRPM.
A0A0A1S3Z7_9FLAO/186-214             .PKINSAGVYGVRPGSPFLFRVAATGDRPM.
S0EUN2_CHTCT/208-236                 .PAIHGAPVVGATPGYPFLFLIPVTGEGP-f
J3C9T2_9FLAO/187-215                 .PKINSASVFGVRPGSPFQFRIPATGDWPM.
G8TAB6_NIAKG/41-69                   .PKINGPVVFGVRPGHPILFTIPATGTRPM.
Q5L7T7_BACFN/36-64                   .PCINPPHVVGNYPATPFLFYIPTSGERPI.
#=GR Q5L7T7_BACFN/36-64        SS    .-EE-S--EEEE-TTSEEEEE--EESSSS-.
R5RYG8_9BACE/45-73                   .PRINGAKVYGARPGADFLYRIPCTGERPI.
#=GC SS_cons                         .-EE-S--EEEE-TTSEEEEE--EESSSS-.
#=GC seq_cons                        .P+INuspVaGsRPGsPFLapIssoGcRPM.
//
DBGET integrated database retrieval system