LinkDB: He_PIG_assoc
Original site: He_PIG_assoc
Gene (258) KEGG GENES (258) Protein sequence (351) UniProt (351) 3D Structure (2) PDB (2) Protein domain (3) InterPro (1) Pfam (1) NCBI-CDD (1) Literature (2) PubMed (2) All databases (616)
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#=GF ID He_PIG_assoc #=GF AC PF10632.8 #=GF DE He_PIG associated, NEW1 domain of bacterial glycohydrolase #=GF AU Naumoff D, Coggill P #=GF SE Pfam-B_97991 (release 22.0) #=GF GA 25.00 25.00; #=GF TC 25.20 30.80; #=GF NC 22.50 23.40; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 26740544 -E 1000 --cpu 4 HMM pfamseq #=GF TP Domain #=GF RN [1] #=GF RM 15285616 #=GF RT [Phylogenetic analysis of alpha-galactosidases of the GH27 #=GF RT family]. #=GF RA Naumov DG; #=GF RL Mol Biol (Mosk). 2004;38:463-476. #=GF RN [2] #=GF RM 16131397 #=GF RT GH97 is a new family of glycoside hydrolases, which is related #=GF RT to the alpha-galactosidase superfamily. #=GF RA Naumoff DG; #=GF RL BMC Genomics. 2005;6:112. #=GF DR INTERPRO; IPR019599; #=GF CC The English-language version of the first reference can be found #=GF CC on pages 388-399 of the above. This domain has been named NEW1 #=GF CC but its actual function is not known. It is found on proteins #=GF CC which are bacterial galactosidases [1]. The domain is associated #=GF CC with the He_PIG family, Pfam:PF05345, a putative Ig-containing #=GF CC domain. #=GF SQ 58 #=GS F0S4X1_PSESL/42-70 AC F0S4X1.1 #=GS R7DXU6_9BACE/36-64 AC R7DXU6.1 #=GS A0A142HNA3_9SPHI/285-313 AC A0A142HNA3.1 #=GS A0A146G109_9BACT/44-72 AC A0A146G109.1 #=GS A0A133Z5C6_9BACT/283-311 AC A0A133Z5C6.1 #=GS R5INE1_9PORP/33-61 AC R5INE1.1 #=GS I2EXN3_EMTOG/185-213 AC I2EXN3.1 #=GS F0S5F3_PSESL/189-217 AC F0S5F3.1 #=GS R6X6I1_9BACT/48-76 AC R6X6I1.1 #=GS Q8A1R7_BACTN/192-220 AC Q8A1R7.1 #=GS G2LJP2_CHLTF/58-86 AC G2LJP2.1 #=GS R6FEQ0_9BACE/194-222 AC R6FEQ0.1 #=GS Q8A389_BACTN/40-68 AC Q8A389.1 #=GS C6XVI1_PEDHD/44-72 AC C6XVI1.1 #=GS F8EMB8_RUNSL/205-233 AC F8EMB8.1 #=GS R5PB58_9BACT/285-313 AC R5PB58.1 #=GS E7RNA0_9BACT/316-344 AC E7RNA0.1 #=GS A0A0M8KB44_9BACT/187-215 AC A0A0M8KB44.1 #=GS H1XWZ7_9BACT/318-346 AC H1XWZ7.1 #=GS R5IIC5_9PORP/194-222 AC R5IIC5.1 #=GS C6Y1U1_PEDHD/191-219 AC C6Y1U1.1 #=GS R9GYP4_9SPHI/47-75 AC R9GYP4.1 #=GS R7EDU1_9BACE/187-215 AC R7EDU1.1 #=GS R7DZK5_9BACE/194-222 AC R7DZK5.1 #=GS B1ZN49_OPITP/44-72 AC B1ZN49.1 #=GS A0A068NPC8_9BACT/184-211 AC A0A068NPC8.1 #=GS B9TF41_RICCO/287-315 AC B9TF41.1 #=GS F4KQM3_HALH1/187-215 AC F4KQM3.1 #=GS F8X2N1_9PORP/196-224 AC F8X2N1.1 #=GS B2URC7_AKKM8/45-73 AC B2URC7.1 #=GS H1YCG5_9SPHI/288-316 AC H1YCG5.1 #=GS R6K6D9_9BACE/196-224 AC R6K6D9.1 #=GS C6Y1U3_PEDHD/174-202 AC C6Y1U3.1 #=GS G9RU98_9FIRM/13-41 AC G9RU98.1 #=GS A0A0S7XRE1_9BACT/188-216 AC A0A0S7XRE1.1 #=GS R6KIE4_9BACE/188-216 AC R6KIE4.1 #=GS R5UTA4_9BACT/31-59 AC R5UTA4.1 #=GS C6Y1G1_PEDHD/58-86 AC C6Y1G1.1 #=GS A0A161LVT4_9PORP/186-214 AC A0A161LVT4.1 #=GS A0A162QVW9_9BACT/190-218 AC A0A162QVW9.1 #=GS W0RNJ1_9BACT/214-242 AC W0RNJ1.1 #=GS H1YFU2_9SPHI/193-221 AC H1YFU2.1 #=GS A0A139TRJ0_9BACT/45-73 AC A0A139TRJ0.1 #=GS Q5LFG6_BACFN/36-64 AC Q5LFG6.1 #=GS Q5LFG6_BACFN/36-64 DR PDB; 4NZJ A; 36-64; #=GS I2EXN1_EMTOG/190-218 AC I2EXN1.1 #=GS E4T4X7_PALPW/195-223 AC E4T4X7.1 #=GS F4KQM5_HALH1/189-217 AC F4KQM5.1 #=GS R6Z296_9BACT/191-219 AC R6Z296.1 #=GS A0A0S8KTY5_9BACT/182-210 AC A0A0S8KTY5.1 #=GS A0A0Q5Q4R0_9FLAO/186-214 AC A0A0Q5Q4R0.1 #=GS A0A095ZNU6_9BACT/268-296 AC A0A095ZNU6.1 #=GS R5C3M6_9BACE/192-220 AC R5C3M6.1 #=GS A0A146G0P6_9BACT/40-68 AC A0A146G0P6.1 #=GS S0EUN2_CHTCT/208-236 AC S0EUN2.1 #=GS R7DVI2_9BACE/188-216 AC R7DVI2.1 #=GS G8TAB6_NIAKG/41-69 AC G8TAB6.1 #=GS Q5L7T7_BACFN/36-64 AC Q5L7T7.1 #=GS Q5L7T7_BACFN/36-64 DR PDB; 4OGZ B; 36-64; #=GS Q5L7T7_BACFN/36-64 DR PDB; 4OGZ A; 36-64; #=GS R5RYG8_9BACE/45-73 AC R5RYG8.1 F0S4X1_PSESL/42-70 .PKINGAKVFGVRPGHPIIYTIPTSGLRPM. R7DXU6_9BACE/36-64 .PVINSPVIVGNYPSTPFLFYIPTSGERPM. A0A142HNA3_9SPHI/285-313 .PKINGAEVYGARPGNPFLYLIPASGQKPL. A0A146G109_9BACT/44-72 .PRLNGPSVFGVRPGSPVLYTIPATGERPI. A0A133Z5C6_9BACT/283-311 .PRINSAEVFGVRPGSPVIFRIPASGDRPM. R5INE1_9PORP/33-61 .PYINPPYVTAIYPNTDFVFAIPTSGERPM. I2EXN3_EMTOG/185-213 .PKINSPKLFGARPNNPFLYTIAATGERPM. F0S5F3_PSESL/189-217 .PRINSASVYGVRPGSPFLFRIPATGERPM. R6X6I1_9BACT/48-76 .PRINGAKIYGARPGSDFLYKVAATGDRPM. Q8A1R7_BACTN/192-220 .PQINNPLTYGARPGNPFLMPIMVSGKRPM. G2LJP2_CHLTF/58-86 .PRLNGPRVVGTTPGREFIYRLPVTGAAPL. R6FEQ0_9BACE/194-222 .PRINCALVFGVRPGSPFQFLVATTGDRPM. Q8A389_BACTN/40-68 .PCINSPRAIGNYPASPFLFYIPTTGQRPM. C6XVI1_PEDHD/44-72 .PRINGARIFGLRPGSAFLYTIPATGIRPM. F8EMB8_RUNSL/205-233 .PRINSAGVFGATPNNPFLYTIAATGERPM. R5PB58_9BACT/285-313 .PRYNGPLVYGVRPGSPVIFRIPVSGERPM. E7RNA0_9BACT/316-344 .PRINSAERFGVRPESPVIYRIPASGERPM. A0A0M8KB44_9BACT/187-215 .PRVNGAKITGASPAKPFLFTIAATGERPM. H1XWZ7_9BACT/318-346 .PQINYPRVYGQRTGKPFLFRIPVSGQRPI. R5IIC5_9PORP/194-222 .PRINAPYIHGARPGNPFLFNLPISGERPL. C6Y1U1_PEDHD/191-219 .PKINSAKVFGASPGNPVLYTIAATGRRPM. R9GYP4_9SPHI/47-75 .PRINGPLVYGSRPGHPFLYRIPCQGERPI. R7EDU1_9BACE/187-215 .PVINNPLVYGARPGNPFLWSVMATGNRPM. R7DZK5_9BACE/194-222 .PVINNPLVFGARPGNPFLWSIMATGNRPM. B1ZN49_OPITP/44-72 .PRINGASVFGVRPGAPFLYAIPATGQRPM. A0A068NPC8_9BACT/184-211 e--INGPRVVGGTPGRDFLFRIPASGKRPL. B9TF41_RICCO/287-315 .PKINGADVYGARPGNPFLYLIPATGKKPL. F4KQM3_HALH1/187-215 .PRINSPKVFGARPGNPFLYTIAATGQAPI. F8X2N1_9PORP/196-224 .PIINNPLVYGARPGNPFLWTIMATGQRPM. B2URC7_AKKM8/45-73 .PSINGARIVGATPGSRMLFQVPVSGERPM. H1YCG5_9SPHI/288-316 .PVINSAAVLGVKALHPILYRIPVSGSKPI. R6K6D9_9BACE/196-224 .PRINNPLVYGARPGNPFLMTIMVSGNRPM. C6Y1U3_PEDHD/174-202 .PKINSAAVFGARPGNPFLYTIAATGERPL. G9RU98_9FIRM/13-41 .PRFTAPSVFCAAPGKPFLYRIPVLGKRPI. A0A0S7XRE1_9BACT/188-216 .PSINGPRIVGATPGNPFMFLIPATGEGPL. R6KIE4_9BACE/188-216 .PRINGASVFGVRPGSPFQYQIAATGDRPM. R5UTA4_9BACT/31-59 .PRINAPYVTGNYPHTEFVFAVPTSGERPM. C6Y1G1_PEDHD/58-86 .PRINGPRVFGVRPNHPILFTIPASGNRPM. A0A161LVT4_9PORP/186-214 .PRINSAAVFGVRPGSPFQYFVAATGDRPM. A0A162QVW9_9BACT/190-218 .PRINSPSVFGVRPSNPFLYQVVATGKRPM. W0RNJ1_9BACT/214-242 .PRINGPSLTGVTPGHDVLYRIPVSGTRPM. H1YFU2_9SPHI/193-221 .PKINSASVFGVRPGSPFQFLVAATGDRPM. A0A139TRJ0_9BACT/45-73 .PSINGARVLGVRPGSEVLFQVPVSGERPM. Q5LFG6_BACFN/36-64 .PRINSPHIIGNYPSTPFIFYIPTSGQRPM. #=GR Q5LFG6_BACFN/36-64 SS .-EE-S--EEEE-TTSEEEEE--EESSSS-. I2EXN1_EMTOG/190-218 .PKINSAKLFGATPNNPFLYTIAATGERPM. E4T4X7_PALPW/195-223 .PKITGAKVFGVRPGSPFQYLVTATGDRPM. F4KQM5_HALH1/189-217 .PRINSAKIFGATPGNPVLYTIAATGEKPI. R6Z296_9BACT/191-219 .PQINNPLVYGARPGNPFLMPVMASGKRPM. A0A0S8KTY5_9BACT/182-210 .PRINGAKVFGVRPGSPFLFTIAATGGRPM. A0A0Q5Q4R0_9FLAO/186-214 .PRINSAAVFGVRPGSPFLFRIPATGERPM. A0A095ZNU6_9BACT/268-296 .PRINSAAVMGVRPGSPVIFRIPASGDRPM. R5C3M6_9BACE/192-220 .PVINNPLVFGARPGNPFLWSVMATGNRPM. A0A146G0P6_9BACT/40-68 .PRINGPKIFGVRPGSPFLYAIPATGKRPI. S0EUN2_CHTCT/208-236 .PAIHGAPVVGATPGYPFLFLIPVTGEGP-f R7DVI2_9BACE/188-216 .PRINGASVFGVRPGSPFQYQIAATGDRPM. G8TAB6_NIAKG/41-69 .PKINGPVVFGVRPGHPILFTIPATGTRPM. Q5L7T7_BACFN/36-64 .PCINPPHVVGNYPATPFLFYIPTSGERPI. #=GR Q5L7T7_BACFN/36-64 SS .-EE-S--EEEE-TTSEEEEE--EESSSS-. R5RYG8_9BACE/45-73 .PRINGAKVYGARPGADFLYRIPCTGERPI. #=GC SS_cons .-EE-S--EEEE-TTSEEEEE--EESSSS-. #=GC seq_cons .P+INuspVaGsRPGsPFLapIsAoGcRPM. //