#=GF ID Herpes_IE2_3
#=GF AC PF03361.9
#=GF DE Herpes virus intermediate/early protein 2/3
#=GF AU Mifsud W, Fenech M
#=GF SE Pfam-B_2178 (release 6.6)
#=GF GA 25.00 25.00;
#=GF TC 48.90 44.20;
#=GF NC 18.90 18.50;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Family
#=GF RN [1]
#=GF RM 1717716
#=GF RT Alternate promoter selection within a human cytomegalovirus
#=GF RT immediate-early and early transcription unit (UL119-115) defines
#=GF RT true late transcripts containing open reading frames for
#=GF RT putative viral glycoproteins.
#=GF RA Leatham MP, Witte PR, Stinski MF;
#=GF RL J Virol 1991;65:6144-6153.
#=GF DR INTERPRO; IPR005028;
#=GF CC These viral sequences are similar to UL117 protein of human and
#=GF CC chimpanzee cytomegalovirus, and to intermediate/early proteins
#=GF CC 2 and 3 of certain herpes viruses. UL117 is thought to be a
#=GF CC glycoprotein that is expressed at early and late times after
#=GF CC infection [1]. This region is close to the C-terminus of the
#=GF CC protein and may be a transmembrane region [1].
#=GF SQ 91
#=GS B7TQ16_9BETA/95-256 AC B7TQ16.1
#=GS G8XUH5_9BETA/101-258 AC G8XUH5.1
#=GS G8XT14_9BETA/92-249 AC G8XT14.1
#=GS D5LXA9_HCMV/383-544 AC D5LXA9.1
#=GS D2K5K9_HCMV/383-544 AC D2K5K9.1
#=GS Q6SWL9_HCMV/383-544 AC Q6SWL9.1
#=GS Q8QHS2_9BETA/1460-1621 AC Q8QHS2.1
#=GS C8CPJ7_HCMV/261-420 AC C8CPJ7.1
#=GS D2K5K5_HCMV/260-419 AC D2K5K5.1
#=GS VU84_HHV7J/134-298 AC P52534.1
#=GS D2K506_HCMV/383-544 AC D2K506.1
#=GS C8BKQ6_HCMV/260-419 AC C8BKQ6.1
#=GS A8T7J9_HCMV/261-420 AC A8T7J9.1
#=GS Q6SWS5_HCMV/383-544 AC Q6SWS5.1
#=GS B9VXR7_HCMVT/260-419 AC B9VXR7.1
#=GS E9RHB6_9BETA/286-447 AC E9RHB6.1
#=GS E7DVP9_HCMV/260-419 AC E7DVP9.1
#=GS D2K4M9_HCMV/383-544 AC D2K4M9.1
#=GS Q6SX40_HCMV/383-544 AC Q6SX40.1
#=GS O57045_9BETA/327-488 AC O57045.1
#=GS D2W9M6_HCMV/383-544 AC D2W9M6.1
#=GS G8H0P8_9BETA/299-461 AC G8H0P8.1
#=GS Q2FAF0_9BETA/423-585 AC Q2FAF0.1
#=GS Q7M009_SCMVC/828-990 AC Q7M009.1
#=GS Q9DW70_RCMVM/303-464 AC Q9DW70.1
#=GS UL117_HCMVA/260-419 AC P16770.1
#=GS Q8QRY7_9BETA/402-563 AC Q8QRY7.1
#=GS Q9YUG3_9BETA/1-145 AC Q9YUG3.1
#=GS O56298_9BETA/134-298 AC O56298.1
#=GS C8CFF2_HCMV/383-544 AC C8CFF2.1
#=GS D2W9S4_HCMV/382-543 AC D2W9S4.1
#=GS G8XTH6_SCMVC/384-546 AC G8XTH6.1
#=GS G8XUH9_9BETA/420-581 AC G8XUH9.1
#=GS IE247_HCMVT/213-374 AC P06435.2
#=GS O56300_9BETA/1033-1194 AC O56300.1
#=GS D2K4M5_HCMV/261-420 AC D2K4M5.1
#=GS D2IG93_HCMV/383-544 AC D2IG93.1
#=GS IE2_HHV6G/1293-1455 AC Q8BB47.1
#=GS VIE2_HCMVA/383-544 AC P19893.2
#=GS VIE2_HCMVM/383-544 AC Q6SW29.1
#=GS Q9WSZ8_HHV6H/1341-1502 AC Q9WSZ8.1
#=GS Q91TH4_TUHV1/213-374 AC Q91TH4.1
#=GS VU84_HHV6Z/167-331 AC P52533.2
#=GS VIE3_MUHVS/424-585 AC P29832.1
#=GS Q90142_9BETA/425-587 AC Q90142.1
#=GS B7TQ13_9BETA/11-154 AC B7TQ13.1
#=GS VU84_HHV6U/167-331 AC P52532.1
#=GS H2A112_MUHV1/423-584 AC H2A112.1
#=GS C8BL50_HCMV/261-420 AC C8BL50.1
#=GS G8H0P1_9BETA/214-373 AC G8H0P1.1
#=GS C8BLI6_HCMV/262-421 AC C8BLI6.1
#=GS Q98683_9BETA/387-549 AC Q98683.1
#=GS C6L6E4_9BETA/462-623 AC C6L6E4.1
#=GS G8XU06_SCMVC/216-375 AC G8XU06.1
#=GS VIE3_HCMVT/213-267 AC P06434.1
#=GS Q7TFJ1_RHCM6/214-373 AC Q7TFJ1.1
#=GS Q6RXC8_HCMV/55-214 AC Q6RXC8.1
#=GS G8XTH2_SCMVC/216-375 AC G8XTH2.1
#=GS H2A1H5_MUHV1/424-585 AC H2A1H5.1
#=GS VIE2_HCMVT/382-543 AC Q6SWP7.1
#=GS H2A2W5_MUHV1/425-586 AC H2A2W5.1
#=GS IE2_HHV6Z/1348-1509 AC Q9QJ16.1
#=GS Q91TI4_TUHV1/240-386 AC Q91TI4.1
#=GS O57147_9BETA/389-467 AC O57147.1
#=GS D2W9X2_HCMV/383-544 AC D2W9X2.1
#=GS Q6SWJ2_HCMVO/383-544 AC Q6SWJ2.1
#=GS Q69513_HHV7J/1033-1194 AC Q69513.1
#=GS H2A1Y6_MUHV1/426-587 AC H2A1Y6.1
#=GS Q785L8_HHV6H/167-331 AC Q785L8.1
#=GS IE2_HHV6U/1327-1489 AC Q77Z83.2
#=GS D2W9Z6_HCMV/383-544 AC D2W9Z6.1
#=GS H2A3C9_MUHV1/425-586 AC H2A3C9.1
#=GS Q6SWV3_HCMV/383-544 AC Q6SWV3.1
#=GS O57145_9BETA/167-331 AC O57145.1
#=GS C8BLJ0_HCMV/383-544 AC C8BLJ0.1
#=GS D2K502_HCMV/260-419 AC D2K502.1
#=GS Q2FAF7_9BETA/214-373 AC Q2FAF7.1
#=GS F5HE22_HCMV/383-544 AC F5HE22.1
#=GS Q6RXC5_HCMV/214-375 AC Q6RXC5.1
#=GS D2K5X5_HCMV/383-544 AC D2K5X5.1
#=GS H2A2F3_MUHV1/422-583 AC H2A2F3.1
#=GS D5LXA5_HCMV/260-419 AC D5LXA5.1
#=GS E7DVQ3_HCMV/383-544 AC E7DVQ3.1
#=GS B8YED4_HCMV/260-419 AC B8YED4.1
#=GS F5HFA5_HCMVM/261-420 AC F5HFA5.1
#=GS G8XU10_SCMVC/387-549 AC G8XU10.1
#=GS Q8QRZ1_9BETA/274-433 AC Q8QRZ1.1
#=GS Q6SX11_HCMV/383-544 AC Q6SX11.1
#=GS Q6SWY2_HCMV/383-544 AC Q6SWY2.1
#=GS G8XT18_9BETA/306-467 AC G8XT18.1
#=GS D3YS30_HCMVO/261-420 AC D3YS30.1
B7TQ16_9BETA/95-256 .....PFKCPSTVSVLENAMHYCRQLRVTTRMIMINFTRGSDIKAQIDRMRTHLGAIVNLTISAPFTMEHTYARPHKKETVNRVIEACNGTARDVWKLKERH.T.....HSFSPRASDYRTMDVYAATPCDFMAALKICLAVSNKYPRQVCVRTCTV.DGGCNP..LPIYDTASE-e.................
G8XUH5_9BETA/101-258 ..hli----QRYGHILEELARLLQMY---DSTAVQLQVNSLC-GNSFNQLKTAVLKLQNVTVLTGMQM-ATQCLPHDAR-AVSTFKH-HERLGRFMDNVAPVlP.....RSSCYADTGLYQMCISGATRKDLVDATTLCISIIDQRPNVFNINIAKLsYPSLAGlhLGTYNEFSN-t.................
G8XT14_9BETA/92-249 .pmvs-----KYGHVFEELGKLLQTH---DSTHVQIQVNASC-GNSFQYLKSAIVKLHNLTILAGMQI-ASQCLPHDSQTISNFKRHEDRG-DLLRNVTDVV.P.....RSACYADSGLHQLYISGATKKDLMDAMTLCLSVIDQYPNIFNVNIIKLsYPSLASfhLSTYSEFTN-t.................
D5LXA9_HCMV/383-544 .....PFMIPSMHQVLEEAIKVCKTMQVNNKGIQIIYTRNHEVKNEVDQVRCRLGSMCNLALSTPFLMEHTMPVTHPPDVAQRTADACNDGVKAVWNLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
D2K5K9_HCMV/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
Q6SWL9_HCMV/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
Q8QHS2_9BETA/1460-1621 .....PKKPFPENKLKEAVYNICSNGCSNTGAIIMYFTRSKQVAEIIKTMQRELMIRPNITVSEPFKMNHAPPNYYDKDAINQFIELQKQGPQELWDKLENN.T.....HDLFTRHSDVKTLMVYAATPIDFVMASKICNKYAKDKPKEIVLRVCSI.IDGDNS..ISIYNSVSRD..................
C8CPJ7_HCMV/261-420 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
D2K5K5_HCMV/260-419 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
VU84_HHV7J/134-298 .....PCGLCSPKNFLSEVYKLLRFY---NSTVVQIQVYSRN-GLLVNSLHEKLMEIANLIVNKGEQT-VSETFFHEQKTAIAINRFLRGTVPHTELTRKEA.MmpvnvNSKHRKNSGVYSLYINAPTEKDLFCAAHLCVQFSIRYPADILLNVSKLtQPLLLKehLIIYNTFNRY..................
D2K506_HCMV/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
C8BKQ6_HCMV/260-419 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
A8T7J9_HCMV/261-420 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
Q6SWS5_HCMV/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
B9VXR7_HCMVT/260-419 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
E9RHB6_9BETA/286-447 derca--------SILRELTRLAKEC---DSTLIQIQVSCSC-ERSMRTLREALSKVINISIVGSSQT-MTQRVLPNPDVSARFHEALLNSTDIHPDYDPNS.RvqllpVSQNASPSGMHMLFVSAATTKELFDALHVCVGITKHRPDLFDLNIAKLsFPLLTSfhAPIYTAY---asq...............
E7DVP9_HCMV/260-419 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
D2K4M9_HCMV/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
Q6SX40_HCMV/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
O57045_9BETA/327-488 .....PYKQQTVQFLYGNAIRTCRESTVHDKIIMVMFTRGQDIRQAIEKLRSQLGQITNLSISAPFNTEHTKPQIHTPNTVNMTSQALAAGLQASWNLDEDN.K.....HNNAPRMSDYRTMIIQAATPPDFLGALKLCIQFAQTFPKNACIRLCNI.VGGLQP..LPIYEKVVT-a.................
D2W9M6_HCMV/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
G8H0P8_9BETA/299-461 .....PFLTTNVHQLMAEAVNVCKTMQVNHRGILVTYTRTHEVKEAVDVGRVKLGKIPNLSISTPFLVEHTMPNVYPAEVVRKTAEACASGIKQAWDLKAVQ.P.....HDMCPRSSDYRNMIVHAATPVDFLGCLQVLVPLVQRFPKQVAIRIFTNeNSNSFM..LPIYDQAAKM..................
Q2FAF0_9BETA/423-585 .....PFLTTNVHQLMAEAVNACKTMQVNHRGIMVTYTRTHEVKEAVDVARVKLGKIPNLSISTPFLVEHTMPNVYPAEVVRKTAEACASGIKQAWDLKAVQ.P.....HDMCPRSSDYRNMIVHAATPVDFLGSLQVLVPLVQRFPKQVAIRIFTNeNSNSFM..LPIYDQAAKM..................
Q7M009_SCMVC/828-990 .....PFQPTNVHQILSEAVTVCKTMQVSNRGIMLIYTRTHEVKEAVDTARIRLGGICNLAISTPFLMEHTMPHVHNPEITRKTAEACQQGLRAVWDLKTVQ.P.....HNLCPRSSDYRTMIINSATPVDFLAAIQVLIPLVQQYPKQVAIRIFSAeNTSSFM..LPIYDNASRM..................
Q9DW70_RCMVM/303-464 .....PFRPMPIQHLMGRAVKLCREGTIHDTFIMMHYTRSQEVRRAVELARDRILKIVNVSMSCPFLTQHTKPRNHSRETVENVSEALASGSRAAWMLDEEH.T.....HDNATRTSDYRSLMLQAATPCDFLCVFKICLELAQEFNKQVCVRLCTI.DGGLNP..LPIYDDVVS-d.................
UL117_HCMVA/260-419 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
Q8QRY7_9BETA/402-563 .....PFNIPSIHQVLEEAIKSCNSMQVNNKGIQLIYTRNHEVKSEVDAVRCRLGSMYNLSLSTPFLMEHTVPVTHPPDVCHRTAEACASGVKAVWDMKETH.T.....HQLCPRSSDYRNMIIHGATPVDFLGALNMCLPLMQKFPKQVMLRIFST.NQSSFM..LPIYESAAK-a.................
Q9YUG3_9BETA/1-145 ....r----------------V---SRVYDSTAIQIQVSAAC-GNAFQNLKTTLLKLHNITVLSGSQI-ITQTVPHTP-QAVAAFKYCHNSSDNVLDTVRSViP.....RAVSYHETGVHQLYVSGATKKDLINAATLCAAVAEKQPDIFNINICALsYPSIAAphLPLYNYFTE-f.................
O56298_9BETA/134-298 .....PCGLCSPKNFLSEVYKLLRFY---NSTVVQIQVYSRN-GLLVNSLHEKLMEIANLIVNKGEQT-VSEIFFHEQKTAIAINRFLRGTVPHTELTRKEA.MmpvnvNSKHRKNSGVYSLYINAPTEKDLFCAAHLCVQFSIRYPADILLNVSKLtQPLLLKehLIIYNTFNRY..................
C8CFF2_HCMV/383-544 .....PFMIPSMHQVLEEAIKACKTMQVNNKGIQIIYTRNHEVKNEVDQVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
D2W9S4_HCMV/382-543 .....PFMIPSMHQVLEEAIKACKTMQVNNKGIQIIYTRNHEVKNEVDQVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
G8XTH6_SCMVC/384-546 .....PFQLTNVHQILSEAVAVCKTMQVSNRGIMLIYTRTHEVKEAVDAARIRLGGICNLAISTPFLMEHTMPHVHNSEVTRKTAEACQQGLRAVWDLKTVQ.P.....HNLCPRSSDYRTMIINAATPVDFLAAIQVLIPLAQQFPKQVAIRIFSAeNTSSFM..LPIYENASRM..................
G8XUH9_9BETA/420-581 .....PFKAAGIHEVLERVIAKCKTMNTTKSMMMIHYTRTYNVKSAVEEMRAKLGMLCNLSISTPFTFEHTAPKIHTPATVRNISQACENGVKGAWDVKEQH.H.....HNLCPRSSDFRTIIVQAATPCDFLQAVKECLPLVYKFPKQVCIRTAEC.DDGGNL..LPIYDECSS-g.................
IE247_HCMVT/213-374 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPKVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETATK-a.................
O56300_9BETA/1033-1194 .....PKKPFPEAKLKESVYALCCNGSSKSGALIIYFTRSKTVAEDIKAMQKELMVRPNITMSEPFKMNHAPPRYYDKDSIKNFIELQKKGPHELWENISNS.A.....HTLYTRHSDLKTIIIYAATPIDFFMAAKICNNYAKKRPKEIVLRLSSI.TDGDNP..ISIYNPVSRD..................
D2K4M5_HCMV/261-420 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
D2IG93_HCMV/383-544 .....PFMIPSMHQVLEEAIKVCKTMQVNNKGIQIIYTRNHEVKNEVDQVRCRLGSMCNLALSTPFLMEHTMPVTHPPDVAQRTADACNDGVKAVWNLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
IE2_HHV6G/1293-1455 .....PKKPCNDKNLKEAVYNICCNGLSNNAAIIMYFTRSKKVAQNIKIMQKELMIRPNITVSEAFKMNHAPPKYYDKDEIKRFIQLQKQGPQELWDKFENNtT.....HDLFTRHSDVKTMIIYAATPIDFVGAVKTCNKYAKDNPKEIVLRVCSI.IDGDNP..ISIYNPISKD..................
VIE2_HCMVA/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
VIE2_HCMVM/383-544 .....PFMIPSMHQVLEEAIKVCKTMQVNNKGIQIIYTRNHEVKNEVDQVRCRLGSMCNLALSTPFLMEHTMPVTHPPDVAQRTADACNDGVKAVWNLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
Q9WSZ8_HHV6H/1341-1502 .....PKKPFPENKLKEAVYNICSNGCSNTGAIIMYFTRSKQVAEIIKTMQRELMIRPNITVSEPFKMNHAPPNYYDKDAINQFIELQKQGPQELWDKLENN.T.....HDLFTRHSDVKTLMVYAATPIDFVMASKICNKYAKDKPKEIVLRVCSI.IDGDNS..ISIYNSVSRD..................
Q91TH4_TUHV1/213-374 .....PFKAPPLHEVWEQTVRACRELQVLNKAILLSYTRTYDVRSAVEDVRAKLGTTVNLSISAPWTMEHTLPRVHTPQTVERVSRACRDGVKTAWELQEHH.T.....HQYCPRASDVRTIMIQAATPCEFLTASRLCLELMQKYPKQVAVRTCTI.DGGHNL..LPIYEGPSS-d.................
VU84_HHV6Z/167-331 .....PYSPCSPKNFMSEIYRLFRCY---NASIVQIQVYSRN-KILINAMQEKLMSIGNMVINVGEQI-ISESVHHEPVVAIAINQFFRGTVPHTDALRKNAvApi.pvNASKKKLVGICSLMINAPTEKDLLCAAHVCINFAICHPNEITLNIAKLtQPMLLRehITIYNSFNKY..................
VIE3_MUHVS/424-585 .....PFRPQSPQYLLGKAIQFCKEETVHDKFIMLFYTRSQDVRKAVDETRARMGMRPNLSISCPFMTEHTKPINHSRETIDRTSAACTAGTQAVWDMEERR.G.....QKCVPRTSDYRSMIIQAANPPDFLGAVKTCLHLSQVFPKQVCMRLCSI.TGGLNP..LPIYEETVS-s.................
Q90142_9BETA/425-587 .....PFLTTNVHQLMAEAVNACKTMQVNHRGIMVTYTRTHEVKEAVDVARVKLGKIPNLSISTPFLVEHTMPNVYPAEVVRKTAEACASGIKQAWDLKAVQ.P.....HDMCPRSSDYRNMIVHAATPVDFLGSLQVLVPLVQRFPKQVAIRIFTNeNSNSFM..LPIYDQAAKM..................
B7TQ13_9BETA/11-154 derca--------SILRELTRLAKEC---DSTLIQIQVSCSC-ERSMRTLREALSKVINISIVGSSQT-MTQRVLPNPDVSARFHEALLNSTDIHPDYDPNS.RvqllpVSQNASPSGMHMLFVSAATTKELFDALHVCR-----------------.------..----------rdhetpsgsirpeyskii
VU84_HHV6U/167-331 .....PYSPCSPKNFMSEIYRLFRCY---NASIVQIQVYSRN-KILINAMQEKLMSIGNMVINVGEQI-ISESVHHEPVVAIAINQFFRGTVPQTDALRKNAvTpi.pvNASKKKLVGICSLMINAPTEKDLLCAAHVCINFAICYPNEITLNIAKLtQPMLLQehITIYNSFNKY..................
H2A112_MUHV1/423-584 .....PFRPQSPQYLLGKAIQFCKEETVHDKFIMLFYTRSQDVRKAVDETRARMGMRPNLSISCPFMTEHTKPINHSRETIDRTSAACTAGTQAVWDMEERR.G.....QKCVPRTSDYRSMIIQAANPPDFLGAVKTCLHLSQVFPKQVCMRLCSI.TGGLNP..LPIYEETV--ns................
C8BL50_HCMV/261-420 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
G8H0P1_9BETA/214-373 .....PSCVIKYRYIFEELSRVSRVY---DSTAIQIQVSAAC-GNAFQNLKTTLLKLHNITVLSGSQI-ITQTVPHTP-QAVAAFKYCHNSSDNVLDTVRSViP.....RAVSYHETGVHQLYVSGATKKDLINAATLCAAVAEKQPDIFNINICALsYPSIAAphLPLYNYFTE-f.................
C8BLI6_HCMV/262-421 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
Q98683_9BETA/387-549 .....PFQPTNVHQILSEAVTVCKTMQVSNRGIMLIYTRTHEVKEAVDTARIRLGGICNLAISTPFLMEHTMPHVHNPEITRKTAEACQQGLRAVWDLKTVQ.P.....HNLCPRSSDYRTMIINSATPVDFLAAIQVLIPLVQQYPKQVAIRIFSAeNTSSFM..LPIYDNASRM..................
C6L6E4_9BETA/462-623 .....PFKCPSTVSVLENAMHYCRQLRVTTRMIMINFTRGSDIKAQIDRMRTHLGAIVNLTISAPFTMEHTYARPHKKETVNRVIEACNGTARDVWKLKERH.T.....HSFSPRASDYRTMVVYAATPCDFMAALKICLAVSNKYPRQVCVRTCTV.DGGCNP..LPIYDTASE-e.................
G8XU06_SCMVC/216-375 .....PSCVIKYKYIFEELSRVSRVY---DSTAIQIQVSAAC-GNAFQNLKTTLLKLHNITVLAGAQI-ITQTVPHTP-QVIAAFKYCHANSHNVLDTVRSViP.....RAVSYHETGVHQLYVSGATKKDLFDAATLCATVAEKQPDIFNINICALsYPSIAAphLPLYNTFTD-f.................
VIE3_HCMVT/213-267 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMC--------------------------------------------.-.....------------------------------------------------.------..----------tw................
Q7TFJ1_RHCM6/214-373 .....PSCVIKYRYIFEELSRVSRVY---DSTAIQIQVSAAC-GNAFQNLKTTLLKLHNITVLSGSQI-ITQTVPHTP-QAVAAFKYCHNSSDNVLDTVRSViP.....RAVSYHETGVHQLYVSGATKKDLINAATLCAAVAEKQPDIFNINICALsYPSIAAphLPLYNYFTE-f.................
Q6RXC8_HCMV/55-214 .....PLFANKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
G8XTH2_SCMVC/216-375 .....PSCVIKYKYIFEELSRVSRVY---DSTAIQIQVSAAC-GNAFQNLKTTLLKLHNITVLAGAQI-ITQTVPHTP-QVIAAFKYCHANSHNVLDTVRSViP.....RAVSYHETGVHQLYVSGATKKDLFDAATLCATVAEKQPDIFNINICALsYPSIAAphLPLYNTFTD-f.................
H2A1H5_MUHV1/424-585 .....PFRPQSPQYLLGKAIQFCKEETVHDKFIMLFYTRSQDVRKAVDETRARMGMRPNLSISCPFMTEHTKPINHSRETIDRTSAACTAGTQAVWDMEERR.G.....QKCVPRTSDYRSMIIQAANPPDFLGAVKTCLHLSQVFPKQVCMRLCSI.TGGLNP..LPIYEETV--ns................
VIE2_HCMVT/382-543 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
H2A2W5_MUHV1/425-586 .....PFRPQSPQYLLGKAIQFCKEETVHDKFIMLFYTRSQDVRKAVDETRARMGMRPNLSISCPFMTEHTKPINHSRETIDRTSAACTAGTQAVWDMEERR.G.....QKCVPRTSDYRSMIIQAANPPDFLGAVKTCLHLSQVFPKQVCMRLCSI.TGGLNP..LPIYEETV--ns................
IE2_HHV6Z/1348-1509 .....PKKPFPENKLKEAVYNICSNGCSNTGAIIMYFTRSKQVAEIIKTMQRELMIRPNITVSEPFKMNHAPPNYYDKDAINQFIELQKQGPQELWDKLENN.T.....HDLFTRHSDVKTLMVYAATPIDFVMASKICNKYAKDKPKEIVLRVCSI.IDGDNS..ISIYNSVSRD..................
Q91TI4_TUHV1/240-386 dprye--------PFFQTLFETLRCT---ESVFVQLYVTTCT-EPLLTEMRTILTLAPNLSLLTGVRQ-LTTGRLPDLAATRDFARAVSLAPTAAGEY----.-.....-----YEDGVFQLYVTAATPPDLLHAACLCVSVAQKAPTAFHLNVLRSaFPTIVPthLPLYMTFI--rh................
O57147_9BETA/389-467 .....PKKPFPENKLKEAVYNICSNGCSNTGAIIMYFTRSKQVAEIIKTMQRELMIRPNITVSEPFKMNHAPPNYYDKDAINQ-------------------.-.....------------------------------------------------.------..----------l.................
D2W9X2_HCMV/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
Q6SWJ2_HCMVO/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
Q69513_HHV7J/1033-1194 .....PKKPFPEAKLKESVYALCCNGSSKSGALIIYFTRSKTVAEDIKAMQKELMVRPNITMSEPFKMNHAPPRYYDKDSIKNFIELQKKGPHELWENISNS.A.....HTLYTRHSDLKTIIIYAATPIDFFMAAKICNNYAKKRPKEIVLRLSSI.TDGDNP..ISIYNPVSRD..................
H2A1Y6_MUHV1/426-587 .....PFRPQSPQYLLGKAIQFCKEETVHDKFIMLFYTRSQDVRKAVDETRARMGMRPNLSISCPFMTEHTKPINHSRETIDRTSAACTAGTQAVWDMEERR.G.....QKCVPRTSDYRSMIIQAANPPDFLGAVKTCLHLSQVFPKQVCMRLCSI.TGGLNP..LPIYEETVS-s.................
Q785L8_HHV6H/167-331 .....PYSPCSPKNFMSEIYRLFRCY---NASIVQIQVYSRN-KILINAMQEKLMSIGNMVINVGEQI-ISESVHHEPVVAIAINQFFRGTVPHTDALRKNAvApi.pvNASKKKLVGICSLMINAPTEKDLLCAAHVCINFAICHPNEITLNIANVtQPMLLRehITIYNSFNKY..................
IE2_HHV6U/1327-1489 .....PKKPCNEKNLKEAVYDICCNGLSNNAAIIMYFTRSKKVAQIIKIMQKELMIRPNITVSEAFKMNHAPPKYYDKDEIKRFIQLQKQGPQELWDKFENNtT.....HDLFTRHSDVKTMIIYAATPIDFVGAVKTCNKYAKDNPKEIVLRVCSI.IDGDNP..ISIYNPISK-e.................
D2W9Z6_HCMV/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
H2A3C9_MUHV1/425-586 .....PFRPQSPQYLLGKAIQFCKEETVHDKFIMLFYTRSQDVRKAVDETRARMGMRPNLSISCPFMTEHTKPINHSRETIDRTSAACSAGTQAVWDMEERR.G.....QKCVPRTSDYRSMIIQAANPPDFLGAVKTCLHLSQVFPKQVCMRLCSI.TGGLNP..LPIYEETV--ns................
Q6SWV3_HCMV/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
O57145_9BETA/167-331 .....PYSPCSPKNFMSEIYRLFRCY---NASIVQIQVYSRN-KILINAMQEKLMSIGNMVINVGEQI-ISESVHHEPVVAIAINQFFRGTVPHTDALRKNAvApi.pvNASKKKLVGICSLMINAPTEKDLLCAAHVCINFAICHPNEITLNIANVtQPMLLRehITIYNSFNKY..................
C8BLJ0_HCMV/383-544 .....PFMIPSMHQVLEEAIKACKTMQVNNKGIQIIYTRNHEVKNEVDQVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
D2K502_HCMV/260-419 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
Q2FAF7_9BETA/214-373 .....PSCVIKYRYIFEELSRVSRVY---DSTAIQIQVSAAC-GNAFQNLKTTLLKLHNITVLSGSQI-ITQTVPHTP-QAVAAFKYCHNSSDNVLDTVRSViP.....RAVSYHETGVHQLYVSGATKKDLINAATLCAAVAEKQPDIFNINICALsYPSIAAphLPLYNYFTE-f.................
F5HE22_HCMV/383-544 .....PFMIPSMHQVLEEAIKVCKTMQVNNKGIQIIYTRNHEVKNEVDQVRCRLGSMCNLALSTPFLMEHTMPVTHPPDVAQRTADACNDGVKAVWNLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
Q6RXC5_HCMV/214-375 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
D2K5X5_HCMV/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
H2A2F3_MUHV1/422-583 .....PFRPQSPQYLLGKAIQFCKEETVHDKFIMLFYTRSQDVRKAVDETRARMGMRPNLSISCPFMTEHTKPINHSRETIDRTSAACTAGTQAVWDMEERR.G.....QKCVPRTSDYRSMIIQAANPPDFLGAVKTCLHLSQVFPKQVCMRLCSI.TGGLNP..LPIYEETVS-s.................
D5LXA5_HCMV/260-419 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
E7DVQ3_HCMV/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
B8YED4_HCMV/260-419 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
F5HFA5_HCMVM/261-420 .....PLFASKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
G8XU10_SCMVC/387-549 .....PFQPTNVHQILSEAVTVCKTMQVSNRGIMLIYTRTHEVKEAVDTARIRLGGICNLAISTPFLMEHTMPHVHNPEITRKTAEACQQGLRAVWDLKTVQ.P.....HNLCPRSSDYRTMIINSATPVDFLAAIQVLIPLVQQYPKQVAIRIFSAeNTSSFM..LPIYDNASRM..................
Q8QRZ1_9BETA/274-433 .....PLFASKYKHIFEEVARLMRVH---DSTAVQIQISASC-GNAFQALKSALLKLHNITVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPGRVLEGIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASVVEKQPDVFNINVSLLtYPSIAAphLPLYNEFT--gf................
Q6SX11_HCMV/383-544 .....PFTIPSMHQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
Q6SWY2_HCMV/383-544 .....PFTIPSMDQVLDEAIKACKTMQVNNKGIQIIYTRNHEVKSEVDAVRCRLGTMCNLALSTPFLMEHTMPVTHPPEVAQRTADACNEGVKAAWSLKELH.T.....HQLCPRSSDYRNMIIHAATPVDLLGALNLCLPLMQKFPKQVMVRIFST.NQGGFM..LPIYETAAK-a.................
G8XT18_9BETA/306-467 .....PFKPTPMNEVLESAIAKCKTMNTTRAMFMIHYTRTYNVKSAIEDVRAQLGMICNLSISSPFTLEHTAPMVHSPSTVRNVSKACEDGVKGVWDLKEDH.T.....HQLCPRSSDYRTIMVHAATPADYLQAIKVCLPLLHKYPRQVCIRTADL.NKGENM..LPIYDDCSS-a.................
D3YS30_HCMVO/261-420 .....PLFANKYKYVFEEVSRLMRLH---DSTAVQLQISASC-GNAFQALKSALLKLHNVTVLAGQQL-ITQTMPHTP-QAVATFKFFHQDPNRVLDCIRPVvP.....RSTSYHETGVYQMWVSGATKKDLFDAVTLCASIVEKQPDVFNINVSLLtYPSIAAphLPLYNEFTS-f.................
#=GC seq_cons .....Phphssh+plh-Esh+hC+shpspspsIhhlaTRspplcstlcsl+scLhphsNlslSssFhhpHT.shsHsPcsuppTtchpppusptsWshcc.p.s.....+phssRpSDh+sMhlpAATPhDLlsAlpLClslspKaP+plslRlhsh.psuhhh..LPIYpphsc.h.................
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