GenomeNet

Database: Pfam
Entry: Homeobox_KN
LinkDB: Homeobox_KN
Original site: Homeobox_KN 
#=GF ID   Homeobox_KN
#=GF AC   PF05920.9
#=GF DE   Homeobox KN domain
#=GF PI   Coprinus_mating;
#=GF AU   Moxon SJ
#=GF SE   Pfam-B_4610 (release 8.0)
#=GF GA   19.80 19.80;
#=GF TC   19.80 19.80;
#=GF NC   19.70 19.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 17690987 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   17429685
#=GF RT   Expression patterns of class I KNOX and YABBY genes in Ruscus
#=GF RT   aculeatus (Asparagaceae) with implications for phylloclade
#=GF RT   homology.
#=GF RA   Hirayama Y, Yamada T, Oya Y, Ito M, Kato M, Imaichi R;
#=GF RL   Dev Genes Evol. 2007;217:363-372.
#=GF RN   [2]
#=GF RM   8537382
#=GF RT   A novel homeobox protein which recognizes a TGT core and
#=GF RT   functionally interferes  with a retinoid-responsive motif.
#=GF RA   Bertolino E, Reimund B, Wildt-Perinic D, Clerc RG;
#=GF RL   J Biol Chem. 1995;270:31178-31188
#=GF RN   [3]
#=GF RM   9336443
#=GF RT   Analysis of TALE superclass homeobox genes (MEIS, PBC, KNOX,
#=GF RT   Iroquois, TGIF) reveals a novel domain conserved between plants
#=GF RT   and animals. 
#=GF RA   Burglin TR; 
#=GF RL   Nucleic Acids Res 1997;25:4173-4180.
#=GF RN   [4]
#=GF RM   17665086
#=GF RT   Comprehensive analysis of animal TALE homeobox genes: new
#=GF RT   conserved motifs and cases of accelerated evolution.
#=GF RA   Mukherjee K, Burglin TR;
#=GF RL   J Mol Evol. 2007;65:137-153.
#=GF RN   [5]
#=GF RM   19734295
#=GF RT   A comprehensive classification and evolutionary analysis of
#=GF RT   plant homeobox genes.
#=GF RA   Mukherjee K, Brocchieri L, Burglin TR;
#=GF RL   Mol Biol Evol. 2009;26:2775-2794.
#=GF RN   [6]
#=GF RM   21557080
#=GF RT   Homeodomain subtypes and functional diversity.
#=GF RA   Burglin TR;
#=GF RL   Subcell Biochem. 2011;52:95-122.
#=GF DR   INTERPRO; IPR008422;
#=GF CC   This is a homeobox transcription factor KN domain conserved from
#=GF CC   fungi to human and plants. They were first identified as TALE
#=GF CC   homeobox genes in eukaryotes, (including KNOX and MEIS genes)
#=GF CC   [1,2,3]. They have been recently classified [4,5,6].
#=GF SQ   3970
#=GS A0A068S5F2_9FUNG/134-173    AC A0A068S5F2.1
#=GS C4Y3V0_CLAL4/151-190        AC C4Y3V0.1
#=GS W5EQ63_WHEAT/399-438        AC W5EQ63.1
#=GS A7S425_NEMVE/153-192        AC A7S425.1
#=GS F8VZH2_HUMAN/33-72          AC F8VZH2.7
#=GS F6WXP2_HORSE/283-322        AC F6WXP2.1
#=GS M0RER1_MUSAM/1-27           AC M0RER1.1
#=GS A0A0E0R1T5_ORYRU/342-381    AC A0A0E0R1T5.1
#=GS B9IIL1_POPTR/376-415        AC B9IIL1.2
#=GS A0A0D2U6R4_GOSRA/239-278    AC A0A0D2U6R4.1
#=GS T1H893_RHOPR/288-327        AC T1H893.1
#=GS M4D9B5_BRARP/295-334        AC M4D9B5.1
#=GS M1A1M8_SOLTU/2-30           AC M1A1M8.1
#=GS U5D0Z5_AMBTC/413-452        AC U5D0Z5.1
#=GS KNOX7_MAIZE/41-80           AC P56665.1
#=GS B9HAN9_POPTR/282-321        AC B9HAN9.2
#=GS AKR_CHICK/53-92             AC Q90655.1
#=GS M2N4A0_BAUCO/381-420        AC M2N4A0.1
#=GS E2RP82_CANLF/163-202        AC E2RP82.2
#=GS R7Z5F8_CONA1/272-311        AC R7Z5F8.1
#=GS U3ISP0_ANAPL/53-92          AC U3ISP0.1
#=GS A0A0G4MXP3_9PEZI/122-161    AC A0A0G4MXP3.1
#=GS F1NMD4_CHICK/66-105         AC F1NMD4.2
#=GS G3S4Y1_GORGO/290-329        AC G3S4Y1.1
#=GS G3RDV6_GORGO/145-184        AC G3RDV6.1
#=GS H0ESI0_GLAL7/196-235        AC H0ESI0.1
#=GS A0A0N1NYM8_9EURO/187-226    AC A0A0N1NYM8.1
#=GS A0A087XC90_POEFO/257-296    AC A0A087XC90.2
#=GS G4V9N2_SCHMA/476-515        AC G4V9N2.1
#=GS I1I5P4_BRADI/347-386        AC I1I5P4.1
#=GS D8T710_SELML/356-395        AC D8T710.1
#=GS A0A078CR56_BRANA/408-447    AC A0A078CR56.1
#=GS I1HMP8_BRADI/224-263        AC I1HMP8.1
#=GS W4WQK8_ATTCE/22-61          AC W4WQK8.1
#=GS A0A0E0JXK1_ORYPU/473-512    AC A0A0E0JXK1.1
#=GS F6Q0C8_ORNAN/161-191        AC F6Q0C8.1
#=GS K7UBA4_MAIZE/247-286        AC K7UBA4.1
#=GS H2ZGG1_CIOSA/119-158        AC H2ZGG1.1
#=GS KNAT4_ARATH/326-365         AC P48001.3
#=GS M3Z5S3_MUSPF/52-91          AC M3Z5S3.1
#=GS M3Y494_MUSPF/290-329        AC M3Y494.1
#=GS K4DA52_SOLLC/387-426        AC K4DA52.1
#=GS A0A0K9Q4R0_ZOSMR/334-373    AC A0A0K9Q4R0.1
#=GS A0A068RRH7_9FUNG/215-254    AC A0A068RRH7.1
#=GS H2T2H8_TAKRU/129-168        AC H2T2H8.1
#=GS M2TFE6_COCSN/194-233        AC M2TFE6.1
#=GS B9RC00_RICCO/245-284        AC B9RC00.1
#=GS M4E5B1_BRARP/303-342        AC M4E5B1.1
#=GS J3LKB5_ORYBR/352-391        AC J3LKB5.1
#=GS M1D1Z1_SOLTU/108-147        AC M1D1Z1.1
#=GS H2T2H7_TAKRU/129-168        AC H2T2H7.1
#=GS G0VEE7_NAUCC/198-237        AC G0VEE7.1
#=GS M0V4N1_HORVD/89-128         AC M0V4N1.1
#=GS IRX6_MOUSE/161-200          AC Q9ER75.2
#=GS I1PEA9_ORYGL/75-114         AC I1PEA9.1
#=GS M0ZWL8_SOLTU/348-387        AC M0ZWL8.1
#=GS H0YNA8_HUMAN/368-407        AC H0YNA8.1
#=GS V4MKY2_EUTSA/365-404        AC V4MKY2.1
#=GS M1UW87_CYAME/275-314        AC M1UW87.1
#=GS A0A074YRM1_9PEZI/313-352    AC A0A074YRM1.1
#=GS A0A0Q9X6S9_DROMO/124-163    AC A0A0Q9X6S9.1
#=GS M1C8Y4_SOLTU/97-136         AC M1C8Y4.1
#=GS A0A061GI15_THECC/278-317    AC A0A061GI15.1
#=GS A0A096NIR5_PAPAN/277-316    AC A0A096NIR5.1
#=GS A0A0N5DPW4_TRIMR/186-225    AC A0A0N5DPW4.1
#=GS V7CUJ9_PHAVU/319-358        AC V7CUJ9.1
#=GS K4A6U7_SETIT/400-439        AC K4A6U7.1
#=GS T1EIV2_HELRO/11-50          AC T1EIV2.1
#=GS F7BFD3_CIOIN/342-381        AC F7BFD3.2
#=GS W5H607_WHEAT/113-152        AC W5H607.1
#=GS I1MTZ0_SOYBN/276-315        AC I1MTZ0.1
#=GS G3I0Z5_CRIGR/136-164        AC G3I0Z5.1
#=GS BLH1_ARATH/403-442          AC Q9SJ56.1
#=GS F6RHT9_HORSE/277-316        AC F6RHT9.1
#=GS D8T709_SELML/351-390        AC D8T709.1
#=GS G3QIF1_GORGO/69-109         AC G3QIF1.1
#=GS I1PEE3_ORYGL/399-438        AC I1PEE3.1
#=GS Q84ZW2_SOLLC/262-301        AC Q84ZW2.1
#=GS X0J881_FUSOX/247-286        AC X0J881.1
#=GS MEIS2_HUMAN/294-333         AC O14770.2
#=GS MEIS2_HUMAN/294-333         DR PDB; 5BNG B; 16-55;
#=GS MEIS2_HUMAN/294-333         DR PDB; 5BNG A; 16-55;
#=GS MEIS2_HUMAN/294-333         DR PDB; 4XRM A; 290-329;
#=GS MEIS2_HUMAN/294-333         DR PDB; 3K2A B; 294-333;
#=GS MEIS2_HUMAN/294-333         DR PDB; 3K2A A; 294-333;
#=GS MEIS2_HUMAN/294-333         DR PDB; 4XRM B; 290-329;
#=GS M3XW79_MUSPF/145-184        AC M3XW79.1
#=GS MKX_PONAB/88-127            AC Q5R6P2.1
#=GS H2VHT8_CAEJA/213-252        AC H2VHT8.2
#=GS A0A067H447_CITSI/103-142    AC A0A067H447.1
#=GS A0A0A2J8F9_PENEN/231-270    AC A0A0A2J8F9.1
#=GS A0A094E258_9PEZI/127-166    AC A0A094E258.1
#=GS J3MAL5_ORYBR/208-247        AC J3MAL5.1
#=GS U3J2C7_ANAPL/307-348        AC U3J2C7.1
#=GS H2U6V0_TAKRU/124-163        AC H2U6V0.1
#=GS A0A0C4DTM8_MAGP6/387-426    AC A0A0C4DTM8.1
#=GS K4AJL1_SETIT/552-589        AC K4AJL1.1
#=GS T1J2A7_STRMM/175-206        AC T1J2A7.1
#=GS E7EPN6_HUMAN/160-199        AC E7EPN6.2
#=GS M0RGR7_MUSAM/291-330        AC M0RGR7.1
#=GS TGIF2_HUMAN/36-75           AC Q9GZN2.1
#=GS H3CR17_TETNG/24-63          AC H3CR17.1
#=GS B4HG44_DROSE/244-283        AC B4HG44.1
#=GS E7KVE6_YEASL/145-184        AC E7KVE6.1
#=GS G3RAB7_GORGO/182-221        AC G3RAB7.1
#=GS W5CEC5_WHEAT/3-42           AC W5CEC5.1
#=GS A0A0A1SY90_9HYPO/226-265    AC A0A0A1SY90.1
#=GS T1IX78_STRMM/54-93          AC T1IX78.1
#=GS M4BWH9_HYAAE/265-304        AC M4BWH9.1
#=GS U3JXF9_FICAL/86-125         AC U3JXF9.1
#=GS W5E6X5_WHEAT/258-297        AC W5E6X5.1
#=GS B8C2Z7_THAPS/2647-2689      AC B8C2Z7.1
#=GS C3XTT9_BRAFL/150-189        AC C3XTT9.1
#=GS M0S357_MUSAM/304-343        AC M0S357.1
#=GS D7KI49_ARALL/364-403        AC D7KI49.1
#=GS A0A087YF87_POEFO/134-173    AC A0A087YF87.2
#=GS K4ACH3_SETIT/238-277        AC K4ACH3.1
#=GS A0A0E0BVN8_9ORYZ/405-444    AC A0A0E0BVN8.1
#=GS Q8AYN2_CHICK/305-344        AC Q8AYN2.1
#=GS F2DUL1_HORVD/356-395        AC F2DUL1.1
#=GS I1NAU4_SOYBN/381-420        AC I1NAU4.1
#=GS M0VQ99_HORVD/293-332        AC M0VQ99.1
#=GS A0A0N5ACF9_9BILA/65-104     AC A0A0N5ACF9.1
#=GS TGIF1_MOUSE/53-92           AC P70284.2
#=GS G1KJ25_ANOCA/54-93          AC G1KJ25.2
#=GS A0A0C4ESC2_PUCT1/159-198    AC A0A0C4ESC2.1
#=GS M4BPQ2_HYAAE/129-168        AC M4BPQ2.1
#=GS G7PGG9_MACFA/36-75          AC G7PGG9.1
#=GS A0A0B0MHW7_GOSAR/417-456    AC A0A0B0MHW7.1
#=GS M3ZSV0_XIPMA/159-198        AC M3ZSV0.1
#=GS M4AHF3_XIPMA/134-173        AC M4AHF3.1
#=GS V7BL77_PHAVU/356-395        AC V7BL77.1
#=GS W5M5S8_LEPOC/53-92          AC W5M5S8.1
#=GS V7AWI0_PHAVU/359-398        AC V7AWI0.1
#=GS A0A0D9VXA8_9ORYZ/222-261    AC A0A0D9VXA8.1
#=GS G3GXW3_CRIGR/36-75          AC G3GXW3.1
#=GS D8TB83_SELML/142-178        AC D8TB83.1
#=GS W5ENJ5_WHEAT/595-634        AC W5ENJ5.1
#=GS M7AU96_CHEMY/222-261        AC M7AU96.1
#=GS W4KNR5_9HOMO/115-154        AC W4KNR5.1
#=GS K1RIX6_CRAGI/167-206        AC K1RIX6.1
#=GS H2S3R4_TAKRU/223-262        AC H2S3R4.1
#=GS M3Y5Z2_MUSPF/162-202        AC M3Y5Z2.1
#=GS I1GNS4_BRADI/294-333        AC I1GNS4.1
#=GS A0A096N3P3_PAPAN/113-152    AC A0A096N3P3.1
#=GS A0A067G9F8_CITSI/479-518    AC A0A067G9F8.1
#=GS G3VQX6_SARHA/89-128         AC G3VQX6.1
#=GS H3B7Z6_LATCH/309-348        AC H3B7Z6.2
#=GS F0XGZ1_GROCL/403-442        AC F0XGZ1.1
#=GS V7AUN8_PHAVU/382-421        AC V7AUN8.1
#=GS S9WM95_9CETA/164-203        AC S9WM95.1
#=GS A0A068RNT1_9FUNG/226-265    AC A0A068RNT1.1
#=GS E2RT16_CANLF/30-50          AC E2RT16.2
#=GS A0A087YDI5_POEFO/170-209    AC A0A087YDI5.1
#=GS M3B0F3_PSEFD/103-142        AC M3B0F3.1
#=GS B3S6L1_TRIAD/41-80          AC B3S6L1.1
#=GS M0SV93_MUSAM/22-52          AC M0SV93.1
#=GS I1M880_SOYBN/397-436        AC I1M880.1
#=GS W5I8T7_WHEAT/298-337        AC W5I8T7.1
#=GS A0A0A2I6L7_PENEN/186-225    AC A0A0A2I6L7.1
#=GS X0J0A7_FUSOX/179-218        AC X0J0A7.1
#=GS W9S6A3_9ROSA/129-168        AC W9S6A3.1
#=GS A0A096TKA7_MAIZE/563-602    AC A0A096TKA7.1
#=GS A0A0K9NS52_ZOSMR/242-281    AC A0A0K9NS52.1
#=GS A0A0D2PH79_GOSRA/225-264    AC A0A0D2PH79.1
#=GS A0A059CTW4_EUCGR/465-504    AC A0A059CTW4.1
#=GS Q4WPQ7_ASPFU/191-230        AC Q4WPQ7.1
#=GS F7GXI5_MACMU/281-320        AC F7GXI5.1
#=GS D4NXR4_MEDTR/222-261        AC D4NXR4.1
#=GS H2RT00_TAKRU/159-198        AC H2RT00.1
#=GS A0A068RPK5_9FUNG/205-244    AC A0A068RPK5.1
#=GS A0A0E0Q0T8_ORYRU/302-341    AC A0A0E0Q0T8.1
#=GS H2T3T3_TAKRU/159-198        AC H2T3T3.1
#=GS G5BPI8_HETGA/161-200        AC G5BPI8.1
#=GS F1RIV9_PIG/5-31             AC F1RIV9.2
#=GS J9KA71_ACYPI/252-291        AC J9KA71.2
#=GS A0A0K9PPL9_ZOSMR/211-250    AC A0A0K9PPL9.1
#=GS Q9AYD9_ORYSJ/399-438        AC Q9AYD9.1
#=GS A0A067QGN3_ZOONE/388-427    AC A0A067QGN3.1
#=GS A0A068S700_9FUNG/136-175    AC A0A068S700.1
#=GS T1HB30_RHOPR/47-86          AC T1HB30.1
#=GS G1TE48_RABIT/160-199        AC G1TE48.1
#=GS A0A0M3HS68_ASCLU/146-185    AC A0A0M3HS68.1
#=GS A0A0D2TEB9_GOSRA/104-143    AC A0A0D2TEB9.1
#=GS C4M889_ENTHI/192-231        AC C4M889.1
#=GS A0A0F2LZR2_SPOSC/276-315    AC A0A0F2LZR2.1
#=GS A0A0E0P1V2_ORYRU/297-330    AC A0A0E0P1V2.1
#=GS J5JP28_BEAB2/110-149        AC J5JP28.1
#=GS A0A086TGU7_ACRCH/149-188    AC A0A086TGU7.1
#=GS A0A078EVT4_BRANA/335-374    AC A0A078EVT4.1
#=GS W9S2F2_9ROSA/301-340        AC W9S2F2.1
#=GS A0A096PSH9_MAIZE/108-147    AC A0A096PSH9.1
#=GS G8F3R1_MACFA/187-247        AC G8F3R1.1
#=GS L1JCV0_GUITH/13-53          AC L1JCV0.1
#=GS A0A059BEC8_EUCGR/403-442    AC A0A059BEC8.1
#=GS A0A074W9W1_9PEZI/28-67      AC A0A074W9W1.1
#=GS I1JCT9_SOYBN/558-597        AC I1JCT9.1
#=GS G9MYG1_HYPVG/42-81          AC G9MYG1.1
#=GS A0A087G678_ARAAL/324-363    AC A0A087G678.1
#=GS A2XCW6_ORYSI/350-389        AC A2XCW6.1
#=GS F0ZWR5_DICPU/68-107         AC F0ZWR5.1
#=GS A0EIF9_PARTE/157-196        AC A0EIF9.1
#=GS M4DL96_BRARP/392-431        AC M4DL96.1
#=GS F7EDV2_XENTR/290-329        AC F7EDV2.1
#=GS U3JRQ9_FICAL/130-169        AC U3JRQ9.1
#=GS D0EL83_HORVD/362-401        AC D0EL83.1
#=GS A0A0D3GBX1_9ORYZ/84-123     AC A0A0D3GBX1.1
#=GS E9FW87_DAPPU/58-97          AC E9FW87.1
#=GS T1G5E5_HELRO/11-49          AC T1G5E5.1
#=GS M1DDU8_SOLTU/63-102         AC M1DDU8.1
#=GS A0A0E0LDZ7_ORYPU/249-288    AC A0A0E0LDZ7.1
#=GS I1L2B3_SOYBN/300-339        AC I1L2B3.1
#=GS A0A0N8K1F2_9TELE/166-205    AC A0A0N8K1F2.1
#=GS G1LMB9_AILME/69-109         AC G1LMB9.1
#=GS W9Z8G1_9EURO/235-274        AC W9Z8G1.1
#=GS H3A057_LATCH/127-166        AC H3A057.1
#=GS X0D445_FUSOX/160-199        AC X0D445.1
#=GS B4NDK3_DROWI/227-266        AC B4NDK3.2
#=GS B9SHD4_RICCO/274-313        AC B9SHD4.1
#=GS H2NVD6_PONAB/263-302        AC H2NVD6.1
#=GS A0A0F9ZAS1_TRIHA/297-336    AC A0A0F9ZAS1.1
#=GS Q4WRP8_ASPFU/184-223        AC Q4WRP8.1
#=GS KNOS3_ORYSJ/258-297         AC Q94LW3.1
#=GS I1JA22_SOYBN/224-263        AC I1JA22.1
#=GS A0A084WDU2_ANOSI/217-256    AC A0A084WDU2.1
#=GS C7ZG76_NECH7/64-103         AC C7ZG76.1
#=GS J7RSK7_KAZNA/194-233        AC J7RSK7.1
#=GS V4M781_EUTSA/318-357        AC V4M781.1
#=GS S7Q5E4_GLOTA/391-430        AC S7Q5E4.1
#=GS TGIF1_HUMAN/182-221         AC Q15583.3
#=GS TGIF1_HUMAN/182-221         DR PDB; 2LK2 A; 23-62;
#=GS A0A096MNY6_PAPAN/59-98      AC A0A096MNY6.1
#=GS KNOS6_ORYSJ/282-321         AC P46609.2
#=GS E4UYS3_ARTGP/262-301        AC E4UYS3.1
#=GS F7E9N8_CALJA/277-316        AC F7E9N8.1
#=GS M4FDP1_BRARP/418-457        AC M4FDP1.1
#=GS A0A0N5AWD0_9BILA/214-253    AC A0A0N5AWD0.1
#=GS G2WQ23_VERDV/242-281        AC G2WQ23.1
#=GS ARA_DROME/273-312           AC Q24248.2
#=GS HBX9_DICDI/577-616          AC Q54VB4.1
#=GS H3AA76_LATCH/291-330        AC H3AA76.1
#=GS F7GXF7_MACMU/294-333        AC F7GXF7.1
#=GS A0A094ADH9_9PEZI/127-166    AC A0A094ADH9.1
#=GS A0A061EUI8_THECC/369-408    AC A0A061EUI8.1
#=GS Q0D006_ASPTN/228-267        AC Q0D006.1
#=GS W5PL27_SHEEP/187-226        AC W5PL27.1
#=GS N4U2U3_FUSC1/42-81          AC N4U2U3.1
#=GS A0A067QPB8_ZOONE/133-172    AC A0A067QPB8.1
#=GS G3JC72_CORMM/258-297        AC G3JC72.1
#=GS Q171W7_AEDAE/217-256        AC Q171W7.1
#=GS F1NHU5_CHICK/78-117         AC F1NHU5.2
#=GS A0A0D9ZBM8_9ORYZ/399-438    AC A0A0D9ZBM8.1
#=GS H3BCZ2_LATCH/159-192        AC H3BCZ2.1
#=GS G3R0X6_GORGO/249-309        AC G3R0X6.1
#=GS I1PF17_ORYGL/220-259        AC I1PF17.1
#=GS W4H0L1_9STRA/64-98          AC W4H0L1.1
#=GS A0A0K0F7F6_9BILA/123-162    AC A0A0K0F7F6.1
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F1RIV9_PIG/5-31                        ..........................................sgq------..--...-.-.....---.-.--.................................EDL..ALE.T..R.....L.T.TE.....................................Q......................................VYN.W......F.ANYRRR.................
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V8PIH0_OPHHA/1-33                      .............................................------..-H...P.Y.....PSE.E.QK.................................KQL..AQD.T..G.....L.T.IL.....................................Q......................................VNN.W......F.INARRR.................
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