GenomeNet

Database: Pfam
Entry: HrpB1_HrpK
LinkDB: HrpB1_HrpK
Original site: HrpB1_HrpK 
#=GF ID   HrpB1_HrpK
#=GF AC   PF09613.7
#=GF DE   Bacterial type III secretion protein (HrpB1_HrpK)
#=GF AU   TIGRFAMs, Coggill P
#=GF SE   TIGRFAMs
#=GF GA   28.20 28.20;
#=GF TC   28.20 31.40;
#=GF NC   28.10 28.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR013394;
#=GF CC   This family of proteins is encoded by genes found within type
#=GF CC   III secretion operons in a limited range of species including
#=GF CC   Xanthomonas, Ralstonia and Burkholderia.
#=GF SQ   19
#=GS C5ALK7_BURGB/6-137      AC C5ALK7.1
#=GS B9TKC5_RICCO/15-146     AC B9TKC5.1
#=GS Q7ALE3_RALSO/1-129      AC Q7ALE3.1
#=GS A0A0D5EAB7_9BURK/1-125  AC A0A0D5EAB7.1
#=GS I1SB54_XANOR/1-126      AC I1SB54.1
#=GS E5AVG8_BURRH/42-166     AC E5AVG8.1
#=GS F5XVZ8_RAMTT/14-138     AC F5XVZ8.1
#=GS Q63JV7_BURPS/1-125      AC Q63JV7.1
#=GS A1TJD7_ACIAC/1-126      AC A1TJD7.1
#=GS E5AVI4_BURRH/6-137      AC E5AVI4.1
#=GS O84674_CHLTR/1-96       AC O84674.1
#=GS H7C773_BURPS/6-137      AC H7C773.1
#=GS F5XVY8_RAMTT/1-126      AC F5XVY8.1
#=GS A0A0D5EC98_9BURK/6-137  AC A0A0D5EC98.1
#=GS Q63JU2_BURPS/6-137      AC Q63JU2.1
#=GS G0AEF4_COLFT/11-139     AC G0AEF4.1
#=GS Q8PB92_XANCP/1-126      AC Q8PB92.1
#=GS A1TJE8_ACIAC/1-121      AC A1TJE8.1
#=GS F2LI88_BURGS/6-137      AC F2LI88.1
C5ALK7_BURGB/6-137                 .............PDYLNCSPEIVGGLIETASDALlqtfpkVSVDPYDIELMLDALRVLRPKVPEIQMLDGILHMVRNHWDDAILVLREVS...ESAPRFAYAKALLAFCLSTKGDSDWKMVANEVLEGSPTRDTVSLVKALHAREE-l.....
B9TKC5_RICCO/15-146                .............PDYLQCGDATLNALIEIASAGLfrhfpqASADTTDIELVLDALRAFRPKVAEIDTLAGVLHIVNGRWEEASRTLRDVI...DAAPSFAYAKGMYAYCLAAQKDAGWRQWADQALEGEAGPETRALVRALTVRAD-l.....
Q7ALE3_RALSO/1-129                 .............MEPIQCSNRLLGGLLEVLMYAT......RSGQFENAQAMLVALRGLRPNFKELDLVEGWLLVGRHQYAEAARILRELLssdGAPSVMPFASAMMALCLNALNDAEWHVHANEVLARDADPDSVTLVRTLLGAQQ-a.....
A0A0D5EAB7_9BURK/1-125             .............MAIKPCNKAALRALLSAFSAGL......RASAHADLDELLLALRVLQPRNAAVDLCDVRLRISRRDWIGALHILRTLE...DQQRGTPLCAALQSWCLYALQDDDWRRYAQTVVL-SGDRASTVLVGRFLKVDE-l.....
I1SB54_XANOR/1-126                 .............MEKIQCPGSVVSGLIELITVGL......THEKIQDAAAVLAAVRVLRPELKALDTFDAWISIKRGNYVDGARLLRELE...GDAGSKPLCRALYACCLFAMGDPSWHGVADGLIEEDADADAVALVKALSGRT--tp....
E5AVG8_BURRH/42-166                ............a-SYLNCSDKTVGALLRLFALGM......ASVPSEDLDDLLLALRVLKPSSTQVDFSEANLRVRQSDWIGALRVLKSIE...ARHQGGAACAALIACCLYHLRDTEWRRYVELVLE-DGNPIALSVVATFLKLD--mr....
F5XVZ8_RAMTT/14-138                .........sdap----SLPDEVFDALVGVLSVAP......QDTASDDVLVSLQALQAARPHLPELSIALAQRHLLAKDLVSARDVLESAD...RRAPRQPLVGALLAFTLHALKDPTWRLRAFEVEGAPCDDLSELLLATLR-----dpas..
Q63JV7_BURPS/1-125                 .............MAIQSCNQAALRTLLSVFSAGL......RAGAHADLDELLLALRILQPRNAAPELCDVRLRIGRRDWLGALHILRTLE...EQERGTPLCAALQSWCLYALQDDDWRRYAQTVLL-TGDHASTVLVGRFLKVDE-l.....
A1TJD7_ACIAC/1-126                 .............MTPKISRREVVAGLINLATKAV......ELELTDDAAEILQGARILRPRMVELDLLEGWICIQRGQVEECIRLMRNVE...GSPTHWGMAKALMARCQRFMRDPAWRANAEEVLAGCTDPTALYLVQQLFAQAG-d.....
E5AVI4_BURRH/6-137                 ............q-QYMKADKLIVGGLIEVVSLFLqvnfqaASGDTEDAEMVIDALRVMRPNALEFKALEGMLWISRGRWDDAVQALEEVL...HERPGFLYAKALLALALFYRGDSAWQVLADEIDESDAGEDSRKLVRAMRARAD-l.....
O84674_CHLTR/1-96                  madldvfkedfal-------------LFEAGMVAI......KQGDEASAKALFQALQVLDPEHTAHELGSGLLHLHKMELTKAEVLFRAIV...EKDPENWSAKAFLSLTLM------------------------------------mivlqq
H7C773_BURPS/6-137                 .............PDYMQCRPEIVGGLIETVSTALlrtfpkVTADPYDIELILDALRVMRPNVVEIQMLDGVLYMACGRWDDAIRILSEVC...ATAPHFGYGKALLAFCLSTKGDDAWKQHAAEALESSPNDDTLVLVKALQARED-m.....
F5XVY8_RAMTT/1-126                 .............MTSAHIDKPLVDALAAVFYVGS......DLEEDAQTLVVLRAIRRLRPHAPTLAVVEAQQLVENGDLQGARLLLEEAD...ACSPGTPVVKAMFALVLQQQRNGLWQAYAQEARNLPPDPKALSILDYLDRIA--rg....
A0A0D5EC98_9BURK/6-137             .............PTYLRCSQAALNELIDAASLSLggaldgPAADPYDIGLLIDALRVLAPQLPAADMFDGMLHVALGNFDDAVRVFAEIA...NGRTNAIYGKALLAFALQLKRDPEWRIAADEVLAAGSPAQAVALVRALERQHD-v.....
Q63JU2_BURPS/6-137                 .............PTYLRCSHAALNGLIDATNLALggaldgPAADPYDIGLLIDALRVLAPQLPAADMFDGMLQIALGNWDDAARAFAEIS...NGTSNAVYGKALLALALQVKRDPEWRLAADEVLAAGGPAQAIALVRALERQHD-v.....
G0AEF4_COLFT/11-139                .............MKMGNCSNELLTGLIELLMFGA......KHNHIEPTERLLAAVHLMRPGFIELRAYDAWILIRQKRFSDAVRLLRELEqqpLRGSFGPYVSSLLAICLANQDDESWRHYANEVMSGKEDADSIELMTTLMGQAG-d.....
Q8PB92_XANCP/1-126                 .............MEKIECPGSVVSGLIELITVGL......THEKIEEAAAVLAAVRVLRPELKALDTFDAWIAIKRGSYLEGARLLRELE...ADAGSEPLCKALYACCLFAVGDPSWHGIAEGLIEEDADADAVGLVKALSGRY--tp....
A1TJE8_ACIAC/1-121                 .............MDETQLPDDPVAALAVRLVEAL......RDDRLDEAETLLDEMNALSPETEEHLIFPVLIAIQRGYITEALQYLNTLG...-----EDTAPELKALCLNILGDPTWHYHAQQCLESDDPHVRKAMRQLLQMEPE-d.....
F2LI88_BURGS/6-137                 .............PDYLNCRPEIVGGLIETASDALlqtfpkVSVDPYDIELMLDALRVLRPKVPEIQMLDGILHMVRNHWDDAILVLREVS...ESAPRFAYAKALLAFCLATKGDGDWKLIANEVLENNPTRDTLALVKALHAREE-l.....
#=GC seq_cons                      ..............shhpCspthlsuLl-shohuL......tssc.tDhphlLsALRlLRPchsplchh-uhLpltpscas-Ah+lL+-lp...tpssttshs+ALhAhCLtshtDssW+hhAppllttsssssulsLVpsLptptt.h.....
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