GenomeNet

Database: Pfam
Entry: LPAM_1
LinkDB: LPAM_1
Original site: LPAM_1 
#=GF ID   LPAM_1
#=GF AC   PF08139.10
#=GF DE   Prokaryotic membrane lipoprotein lipid attachment site
#=GF PI   VirB;
#=GF AU   Lee SC, Bateman A
#=GF SE   Short protein clustering
#=GF GA   22.70 22.70;
#=GF TC   23.10 22.80;
#=GF NC   22.50 22.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 17690987 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Motif
#=GF RN   [1]
#=GF RM   2202727
#=GF RT   Lipoproteins in bacteria.
#=GF RA   Hayashi S, Wu HC;
#=GF RL   J Bioenerg Biomembr. 1990;22:451-471.
#=GF RN   [2]
#=GF RM   3253732
#=GF RT   Distinctive properties of signal sequences from bacterial
#=GF RT   lipoproteins.
#=GF RA   Klein P, Somorjai RL, Lau PC;
#=GF RL   Protein Eng. 1988;2:15-20.
#=GF DR   INTERPRO; IPR012640;
#=GF CC   In prokaryotes, membrane lipoproteins are synthesized with a
#=GF CC   precursor signal peptide, which is cleaved by a specific
#=GF CC   lipoprotein signal peptidase (signal peptidase II). The
#=GF CC   peptidase recognizes a conserved sequence and cuts upstream of a
#=GF CC   cysteine residue to which a glyceride-fatty acid lipid is
#=GF CC   attached [1].
#=GF SQ   46
#=GS Q7CKT3_YERPE/1-35      AC Q7CKT3.1
#=GS W8UFH0_YEREN/1-20      AC W8UFH0.1
#=GS YJAH_ECOLI/1-33        AC P32681.1
#=GS A7MFH6_CROS8/1-20      AC A7MFH6.1
#=GS A0A0G3QE94_KLUIN/1-33  AC A0A0G3QE94.1
#=GS A0A089PRK0_PLUGE/1-20  AC A0A089PRK0.1
#=GS G2DP70_9NEIS/1-20      AC G2DP70.1
#=GS Q32JI9_SHIDS/2-54      AC Q32JI9.1
#=GS Q7CK32_YERPE/1-20      AC Q7CK32.1
#=GS V5CUG3_ENTCL/1-33      AC V5CUG3.1
#=GS Q9L9I1_SALTY/1-33      AC Q9L9I1.1
#=GS A9MM26_SALAR/9-38      AC A9MM26.1
#=GS I6H9C7_SHIFL/1-20      AC I6H9C7.1
#=GS L0MBT1_ENTBF/1-33      AC L0MBT1.1
#=GS F0LP39_VIBFN/1-19      AC F0LP39.1
#=GS A6TGQ8_KLEP7/1-35      AC A6TGQ8.1
#=GS A1S8P9_SHEAM/1-37      AC A1S8P9.1
#=GS Q12R62_SHEDO/1-42      AC Q12R62.1
#=GS A0A0G3QFC3_KLUIN/1-20  AC A0A0G3QFC3.1
#=GS I6G824_SHIFL/1-33      AC I6G824.1
#=GS H2IZJ0_RAHAC/1-20      AC H2IZJ0.1
#=GS V5AVS2_ENTCL/1-20      AC V5AVS2.1
#=GS I6G6H5_SHIFL/1-33      AC I6G6H5.1
#=GS I6H974_SHIFL/1-20      AC I6H974.1
#=GS Q5LP84_RUEPO/35-66     AC Q5LP84.1
#=GS D2TLR0_CITRI/1-20      AC D2TLR0.1
#=GS I2BBQ5_SHIBC/1-20      AC I2BBQ5.1
#=GS C3X779_OXAFO/1-24      AC C3X779.1
#=GS YAJG_ECOLI/1-20        AC P0ADA5.1
#=GS L0M9A3_ENTBF/1-20      AC L0M9A3.1
#=GS Q9KV82_VIBCH/1-35      AC Q9KV82.1
#=GS A0A089QW71_PLUGE/1-35  AC A0A089QW71.1
#=GS A8AK20_CITK8/1-20      AC A8AK20.1
#=GS Q6DAL4_PECAS/1-35      AC Q6DAL4.1
#=GS A4W7A5_ENT38/1-20      AC A4W7A5.1
#=GS A0A090TY94_9ENTR/1-20  AC A0A090TY94.1
#=GS A9MHC8_SALAR/1-33      AC A9MHC8.1
#=GS A0A0L0GSC9_9ENTR/1-20  AC A0A0L0GSC9.1
#=GS Q7N0L0_PHOLL/1-20      AC Q7N0L0.1
#=GS Q8ZRC1_SALTY/8-38      AC Q8ZRC1.1
#=GS Q7N956_PHOLL/1-35      AC Q7N956.1
#=GS A4W5C4_ENT38/1-35      AC A4W5C4.1
#=GS D2TTF7_CITRI/1-33      AC D2TTF7.1
#=GS J1QT72_9ENTR/1-20      AC J1QT72.1
#=GS A0A0L0GIN4_9ENTR/1-33  AC A0A0L0GIN4.1
#=GS Q32AH4_SHIDS/1-33      AC Q32AH4.1
Q7CKT3_YERPE/1-35                 ........MSVKII..................SRGGIKPLLFMQRVLITFGLTLG..LSACSS.
W8UFH0_YEREN/1-20                 ........------..................---------MLKKILFPLLAVFI..LAGCAA.
YJAH_ECOLI/1-33                   ........MNSFN-..................EGVVSPLLSFWRRSLMLAGALL-..LTACSH.
A7MFH6_CROS8/1-20                 ........------..................---------MLKKVLFPLVALFM..LAGCAT.
A0A0G3QE94_KLUIN/1-33             ........MNSFI-..................EGALRPLLSFWHRSRVLAGVLF-..LTACSH.
A0A089PRK0_PLUGE/1-20             ........------..................---------MLKKILFPLVAMFM..LAGCAK.
G2DP70_9NEIS/1-20                 ........------..................---------MMKKFLFAAVAVAG..LAACSN.
Q32JI9_SHIDS/2-54                 ........MNLHALptsprrwqcydggnfyqtRLRVSESPNMFKKILFPLVALFM..LAGCAK.
Q7CK32_YERPE/1-20                 ........------..................---------MLKKILFPLLAIFI..LAGCAT.
V5CUG3_ENTCL/1-33                 ........MNSFV-..................EGAVTPLLSYWRRPLLLVGALL-..LAACSH.
Q9L9I1_SALTY/1-33                 ........MNSFI-..................EGAHQPLLSVWRRAFLFSGALL-..LTACSH.
A9MM26_SALAR/9-38                 ......hv------..................-LSVIESPNMLKKLLFPLVALIM..LAGCAT.
I6H9C7_SHIFL/1-20                 ........------..................---------MFKKILFPLVALFM..LAGCAT.
L0MBT1_ENTBF/1-33                 ........MNSFS-..................EGVVSPLLSIWRSVAALAGVLL-..LSACSH.
F0LP39_VIBFN/1-19                 ........------..................----------MKKILFPLLALGV..LAGCSS.
A6TGQ8_KLEP7/1-35                 ........MAVNSF.................iEGAIKPLLSVWRRPLALAGILL-..LTACSH.
A1S8P9_SHEAM/1-37                 ........MANKSGi................lMRLLSRFGSKMKKSLAVLTAILT..LSGCA-g
Q12R62_SHEDO/1-42                 ........MVKTGKmvn...........fwysDATIFDSVELMKSITSLFIALFL..LSGCAS.
A0A0G3QFC3_KLUIN/1-20             ........------..................---------MLKKLLFPLVALFM..LAGCAT.
I6G824_SHIFL/1-33                 ........MNSFN-..................EGVVSPLLSFWRRSLMLAGALF-..LTACSH.
H2IZJ0_RAHAC/1-20                 ........------..................---------MLKKIIFPVLALLM..LAGCAT.
V5AVS2_ENTCL/1-20                 ........------..................---------MIKKLLFPLVALFM..LAGCAT.
I6G6H5_SHIFL/1-33                 ........MNSFN-..................EGAVSPLLSIWRHTLWLSGVLL-..LSACS-r
I6H974_SHIFL/1-20                 ........------..................---------MFKKILFPLVALFM..LAGCAK.
Q5LP84_RUEPO/35-66                arvarsat------..................-----NPMTVMKKILLPTLALMS..LSACAS.
D2TLR0_CITRI/1-20                 ........------..................---------MLKKILFPLVAIFM..LAGCAT.
I2BBQ5_SHIBC/1-20                 ........------..................---------MLKRLLVPFVALFM..LAGCAT.
C3X779_OXAFO/1-24                 ......mr------..................---------FKKTILAFFVALFMisLAGCAS.
YAJG_ECOLI/1-20                   ........------..................---------MFKKILFPLVALFM..LAGCAK.
L0M9A3_ENTBF/1-20                 ........------..................---------MLKKILFPLVALFM..LAGCAT.
Q9KV82_VIBCH/1-35                 ........MLYTTP..................RLNISAFLFMKQQLSFLFLLSGL..LAGCSS.
A0A089QW71_PLUGE/1-35             ........MAGHSF.................nEGAVSPLLSIWRRLLLLAGVVL-..LSSCSH.
A8AK20_CITK8/1-20                 ........------..................---------MLKKILFPLIALVM..LAGCAT.
Q6DAL4_PECAS/1-35                 ........MPVKSL..................SRGAFSPLLLLRRLCGAGLVLIA..VVACSS.
A4W7A5_ENT38/1-20                 ........------..................---------MLKKLFFPLVALFM..LAGCAT.
A0A090TY94_9ENTR/1-20             ........------..................---------MFKKILFPLVAMFM..LAGCAT.
A9MHC8_SALAR/1-33                 ........MNSFI-..................EGARLPLLSVWRRALLFSGALL-..LTACSH.
A0A0L0GSC9_9ENTR/1-20             ........------..................---------MLKKILFPLVALFM..LAGCAT.
Q7N0L0_PHOLL/1-20                 ........------..................---------MLKRILFPFITLFL..LAGCAA.
Q8ZRC1_SALTY/8-38                 .....yhv------..................-LSVIESLNMLKKLLFPLVALFM..LAGCAT.
Q7N956_PHOLL/1-35                 ........MQKRKN..................RRGIIYPLLLVRQGLMTLGFVFA..LSACTN.
A4W5C4_ENT38/1-35                 ........MAVNSF.................nKGAVSPLLSVWRSTLALAGVLL-..LSACSH.
D2TTF7_CITRI/1-33                 ........MNSFN-..................EGAVSPLLSVWRRALTLAGALL-..LTACSH.
J1QT72_9ENTR/1-20                 ........------..................---------MFKKLLFPLVALFM..LAGCAT.
A0A0L0GIN4_9ENTR/1-33             ........MNSFI-..................EGAVTPLLSIWRRTLALAGVLL-..LSACSH.
Q32AH4_SHIDS/1-33                 ........MNSFN-..................EGVVSPLLSFWRRSLMLAGALF-..LTACSH.
#=GC seq_cons                     .........................................hhK+lLhshlALhh..LuuCup.
//
DBGET integrated database retrieval system