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Database: Pfam
Entry: Lipoprotein_1
LinkDB: Lipoprotein_1
Original site: Lipoprotein_1 
#=GF ID   Lipoprotein_1
#=GF AC   PF00820.17
#=GF DE   Borrelia lipoprotein
#=GF AU   Bateman A
#=GF SE   Pfam-B_1321 (release 2.1)
#=GF GA   25.00 25.00;
#=GF TC   442.50 442.30;
#=GF NC   19.40 18.80;
#=GF BM   hmmbuild --amino HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 17690987 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   9403685
#=GF RT   Genomic sequence of a Lyme disease spirochaete, Borrelia
#=GF RT   burgdorferi. 
#=GF RA   Fraser CM, Casjens S, Huang WM, Sutton GG, Clayton R, Lathigra
#=GF RA   R, White O, Ketchum KA, Dodson R, Hickey EK, Gwinn M, Dougherty
#=GF RA   B, Tomb JF, Fleischmann RD, Richardson D, Peterson J, Kerlavage
#=GF RA   AR, Quackenbush J, Salzberg S, Hanson M, van Vugt R, Palmer N, A
#=GF RL   Nature. 1997;390:580-586.
#=GF RN   [2]
#=GF RM   9108020
#=GF RT   Crystal structure of Lyme disease antigen outer surface protein
#=GF RT   A complexed with an Fab. 
#=GF RA   Li H, Dunn JJ, Luft BJ, Lawson CL 
#=GF RL   Proc Natl Acad Sci USA 1997;94:3584-3589.
#=GF DR   INTERPRO; IPR001809;
#=GF DR   PROSITE; PDOC00013;
#=GF DC   The Pfam entry is a subset of this entry.
#=GF DR   SCOP; 1osp; fa;
#=GF CC   This family of lipoproteins is found in Borrelia spirochetes. 
#=GF CC   The function of these proteins is uncertain.
#=GF SQ   2
#=GS OSPB_BORBU/36-296  AC P17739.2
#=GS OSPB_BORBU/36-296  DR PDB; 1RJL C; 202-296;
#=GS OSPB_BORBU/36-296  DR PDB; 1P4P A; 157-296;
#=GS OSPA_BORBU/21-273  AC P0CL66.1
#=GS OSPA_BORBU/21-273  DR PDB; 2OL8 O; 28-271;
#=GS OSPA_BORBU/21-273  DR PDB; 2OY1 O; 27-272;
#=GS OSPA_BORBU/21-273  DR PDB; 2OYB O; 28-273;
#=GS OSPA_BORBU/21-273  DR PDB; 2G8C O; 28-273;
#=GS OSPA_BORBU/21-273  DR PDB; 2OY7 A; 28-342;
#=GS OSPA_BORBU/21-273  DR PDB; 2FKG A; 28-342;
#=GS OSPA_BORBU/21-273  DR PDB; 2FKJ A; 28-388;
#=GS OSPA_BORBU/21-273  DR PDB; 2OL7 B; 28-273;
#=GS OSPA_BORBU/21-273  DR PDB; 1OSP O; 23-273;
#=GS OSPA_BORBU/21-273  DR PDB; 1FJ1 E; 23-273;
#=GS OSPA_BORBU/21-273  DR PDB; 2FKJ C; 28-388;
#=GS OSPA_BORBU/21-273  DR PDB; 2OY5 O; 27-273;
#=GS OSPA_BORBU/21-273  DR PDB; 2HKD A; 28-342;
#=GS OSPA_BORBU/21-273  DR PDB; 2OL7 A; 27-273;
#=GS OSPA_BORBU/21-273  DR PDB; 3AUM O; 27-273;
#=GS OSPA_BORBU/21-273  DR PDB; 2I5Z O; 28-273;
#=GS OSPA_BORBU/21-273  DR PDB; 2I5V O; 28-273;
#=GS OSPA_BORBU/21-273  DR PDB; 1FJ1 F; 23-273;
#=GS OSPA_BORBU/21-273  DR PDB; 2FKJ B; 28-388;
#=GS OSPA_BORBU/21-273  DR PDB; 2AF5 A; 28-319;
OSPB_BORBU/36-296             DSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQK.ISSKVTKKQGSITEETL.KANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVGGKTTVEIKEGTVTLKREIEKDGKVKVFLNDT..AGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNALK
#=GR OSPB_BORBU/36-296  SS    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXX.XXXXXX-EEEE-TTS-EEEEEEESSSS-EEEEEEEEGGGEEEEEEEETTEEEEEEEETTEEEEEEE-SSSSEEEEEEE-..-SSS-EEEEEECCCTEEEEEETTEEEEEEEE-TTS-EEEEEB-TTSSSB-S--EE--SHHHHCHHC-
OSPA_BORBU/21-273             VSSLDEKNSVSVDLPGEM----------KVLVSKEKNKDGKYDLIATVDKLELKGTSDKNNGSGVLEGVKADKSKVKLTISDDLGQTTLEVFKEDGKTlVSKKVTSKDKSSTEEKFnEKGEVSEKIITRADGTRLEYTGI-KSDGSGKAKEVLKGYV-LEGTLTAEKTTLVVKEGTVTLSKNISKSGEVSVELNDTdsSAATKKTAAWNSGTSTLTITVNSKKTKDLVFTKENTITVQQYDSNGTKLEGSAVEITKLDEIKNALK
#=GR OSPA_BORBU/21-273  SS    XXXXXSSSEEEEEETTTE----------EEEEESS--TTSSEEEEEEETTEEEEEEESSSSS-EEEEEE-TTS-EEEEEE-TTSSEEEEEEE-TTSSSEEEEEEEETTSCEEEEEEETTSSEEEEEEEETTS-EEEEES---TTS-EEEEEEETTEE-EEEEE-SSEEEEEEEETTEEEEEEEETTS-EEEEEEE--S-TTT-EEEEEETTTTEEEEEETTEEEEEEEE-TTS-EEEEEB-TTSSSB-SS-EEE-SHHHHHHHT-
#=GC SS_cons                  XXXXXSSSEEEEEETTTE----------EEEEESS--TTSSEEEEEEETTEEEEEEESSSSS-EEEEEE-TTS-EEEEEE-TTSSEEEEEEE-TTSSSEEEEEEEETTSCEEEEEEETTSSEEEEEEEETTS-EEEEECESSTTSEEEEEEEECCCEEEEEEEETTEEEEEEEETTEEEEEEEETTSSEEEEEEE--S-TTT-EEEEEECCCTEEEEEETTEEEEEEEE-TTS-EEEEEB-TTSSSB-SS-EEE-SHHHHCHHC-
#=GC seq_cons                 sSShcp+pssp.DLPu.h..........KlhVSKEKNpsGKYDLhATlDplELKGTSDKNNGSGsLEGsKsDKSKVKLTlSsDLspsTLEsFctsspp.lSpKVTpKptS.TEEph.ctsclspKhlTRusGTpLEYotI.cuDsusKAhEsLKs.l.LEGoLsutKTTl.lKEGTVTLp+pIpKsGcVpV.LNDT..uuusKKTutWpsuTSTLTIossSKKTKDLVFhp-sTITVQQYsosGTpLEGSAsEIppLsElKNALK
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