GenomeNet

Database: Pfam
Entry: Mu-like_Com
LinkDB: Mu-like_Com
Original site: Mu-like_Com 
#=GF ID   Mu-like_Com
#=GF AC   PF10122.8
#=GF DE   Mu-like prophage protein Com
#=GF AU   COGs, Finn RD, Sammut SJ
#=GF SE   COGs (COG4416)
#=GF GA   22.90 22.90;
#=GF TC   22.90 23.20;
#=GF NC   22.80 22.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 26740544 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   6345072
#=GF RT   Methylation regulates the expression of a DNA-modification
#=GF RT   function encoded by bacteriophage Mu. 
#=GF RA   Kahmann R; 
#=GF RL   Cold Spring Harb Symp Quant Biol. 1983;47:639-646.
#=GF RN   [2]
#=GF RM   11922669
#=GF RT   Bacteriophage Mu genome sequence: analysis and comparison with
#=GF RT   Mu-like prophages in Haemophilus, Neisseria and Deinococcus. 
#=GF RA   Morgan GJ, Hatfull GF, Casjens S, Hendrix RW; 
#=GF RL   J Mol Biol. 2002;317:337-359.
#=GF DR   INTERPRO; IPR019294;
#=GF CC   Members of this family of proteins comprise the translational
#=GF CC   regulator of mom [1][2].
#=GF SQ   47
#=GS G1UPN8_9DELT/7-58       AC G1UPN8.1
#=GS Q5H251_XANOR/1-51       AC Q5H251.1
#=GS A0A0F7GBE7_9CHLR/34-72  AC A0A0F7GBE7.1
#=GS B8DLJ4_DESVM/5-55       AC B8DLJ4.1
#=GS K0I2W9_9BURK/1-48       AC K0I2W9.1
#=GS D2TQ84_CITRI/1-52       AC D2TQ84.1
#=GS D4H5I6_DENA2/8-48       AC D4H5I6.1
#=GS A0A0G3W9I1_9CLOT/1-44   AC A0A0G3W9I1.1
#=GS C3KA35_PSEFS/1-56       AC C3KA35.1
#=GS Q97HV7_CLOAB/1-49       AC Q97HV7.1
#=GS D2TNN8_CITRI/1-50       AC D2TNN8.1
#=GS I8RN07_9FIRM/14-61      AC I8RN07.1
#=GS A0A0S7XPB0_9BACT/1-41   AC A0A0S7XPB0.1
#=GS A0A0A8K2F0_9RHIZ/2-56   AC A0A0A8K2F0.1
#=GS E2CFJ4_9RHOB/1-53       AC E2CFJ4.1
#=GS A0A0G1XBQ4_9BACT/8-50   AC A0A0G1XBQ4.1
#=GS C6BX98_DESAD/1-37       AC C6BX98.1
#=GS VCOM_HAEIN/3-39         AC P71390.1
#=GS F7NHI1_9FIRM/12-62      AC F7NHI1.1
#=GS G7Q8T0_9DELT/1-48       AC G7Q8T0.1
#=GS F2BEV1_9NEIS/1-44       AC F2BEV1.1
#=GS A0A0K8JJD2_9FIRM/14-59  AC A0A0K8JJD2.1
#=GS V9HM18_9NEIS/4-41       AC V9HM18.1
#=GS G2DMV5_9NEIS/3-37       AC G2DMV5.1
#=GS Q8P6J9_XANCP/1-51       AC Q8P6J9.1
#=GS E6W2J6_DESIS/19-54      AC E6W2J6.1
#=GS L2F767_9GAMM/16-65      AC L2F767.1
#=GS A6VP54_ACTSZ/3-38       AC A6VP54.1
#=GS C1DBJ7_LARHH/4-53       AC C1DBJ7.1
#=GS I9LIV9_9FIRM/13-55      AC I9LIV9.1
#=GS COM_BPMU/1-55           AC Q38621.1
#=GS G7QD21_9DELT/1-48       AC G7QD21.1
#=GS A0A037Z480_CLOTT/6-54   AC A0A037Z480.1
#=GS B8DL07_DESVM/5-55       AC B8DL07.1
#=GS E6W232_DESIS/19-61      AC E6W232.1
#=GS A0A0U1KZA8_9FIRM/14-53  AC A0A0U1KZA8.1
#=GS M9X240_MANHA/5-41       AC M9X240.1
#=GS J4TUG8_9PAST/3-39       AC J4TUG8.1
#=GS A0A037Z290_CLOTT/17-61  AC A0A037Z290.1
#=GS A0A0G1TA97_9BACT/2-46   AC A0A0G1TA97.1
#=GS D5CUF6_SIDLE/1-50       AC D5CUF6.1
#=GS Q727X2_DESVH/6-56       AC Q727X2.1
#=GS D9SPF5_CLOC7/11-53      AC D9SPF5.1
#=GS I1YGG9_METFJ/1-49       AC I1YGG9.1
#=GS F7KUT7_9FIRM/1-46       AC F7KUT7.1
#=GS C1D8E4_LARHH/2-52       AC C1D8E4.1
#=GS G4CJE2_9NEIS/1-44       AC G4CJE2.1
G1UPN8_9DELT/7-58                  .....tap---EYRCGHC..NRLLARGa.iE..A..-.G.EIELQCPRCKTRLHLRASRPS----------qaphdglhd................
Q5H251_XANOR/1-51                  ........MLKNLRCGEC..ARLLCKA...G..A..F.D.EIQIKCPRCGTLNHLKAESLTSD-RRERIQE.........................
A0A0F7GBE7_9CHLR/34-72             ......ei---NVLCGSC..KAVLCQGltnN..K..V.D.NIVIKCPVCQGFNEV----------------t........................
B8DLJ4_DESVM/5-55                  .......t-QREVRCGNC..RRLLAKG...E..A..I.D.-LTIKCPRCGCMNHVRGTTPGTEGQRASK--ep.......................
K0I2W9_9BURK/1-48                  .......m--EEIRCGAC..RRKLGEG...-..I..F.T.ALTIKCPRCGGMNHLRAMSPP----------parqgast.................
D2TQ84_CITRI/1-52                  ........MYRNIRCRHC..NKLLARA...S..-..F.S.YLEVKCPRCKTLNQITSPSATEH--------ptytrkscr................
D4H5I6_DENA2/8-48                  .....tci---EIRCKRC..KRLLMKG...V..V..K.N.-VEIKCPKCGYI-------------------qmfeetkli................
A0A0G3W9I1_9CLOT/1-44              ......me---TVKCKHC..GRTLCEL...E..G..-.-.KIKIKCRKCGHWNYIQTK-------------eaaqaaqs.................
C3KA35_PSEFS/1-56                  ........MLKEFRCGNC..KRLLART...G..G..F.T.ELQIKCSRCGTLNHAKDKIL-----------eqsplsdmkaessak..........
Q97HV7_CLOAB/1-49                  .......m--QTLRCAKC..GKVLLEA...E..G..Q.A.HIKKKCPKCKEVNE-----------------fyikeeattqihksn..........
D2TNN8_CITRI/1-50                  ........MTQNVRCKNC..NKLLARA...S..-..F.H.YIEIKCPRCKTLNQI----------------traiehpthmrsydr..........
I8RN07_9FIRM/14-61                 .....kwp---EVRCGQC..NRLLFRG...I..V..E.D.-MEIKCSRCGTIQCI----------------ggckqetrmnvcs............
A0A0S7XPB0_9BACT/1-41              ........MLREFRCKFC..HRLLAKV...G..E..G.S.KVEIKCPKCKTMN------------------lyqddtv..................
A0A0A8K2F0_9RHIZ/2-56              ......sl--ESIRCGKC..AALLFKA...A..AkaL.SgRLEIKCRRCGHLNILRPEEPDTAPDDARIR-f........................
E2CFJ4_9RHOB/1-53                  .......m--QEIRCGRC..RKLLMKS...EpaA..IrG.TVEVKCPRCGTMNSLRPVEPLPERPSE----rtl......................
A0A0G1XBQ4_9BACT/8-50              .....las----YRCKQC..GKLLLKA...T..L..V.DsELEVKCNRCHAINIFKG--------------adgct....................
C6BX98_DESAD/1-37                  ......ms---EHRCPVC..RRLLMKG...K..V..V.E.-VQVKCPKCK---------------------kivrivgd.................
VCOM_HAEIN/3-39                    ......si--KTIRCTFC..NKLLAKV...G..T..V.G.YLEIKCPRCKVINFT----------------k........................
F7NHI1_9FIRM/12-62                 krkealpp----IRCKHC..SRLLCRG...I..A..Q.T.-IEIKCPKCGTIQIIQG--------------ceavtakccv...............
G7Q8T0_9DELT/1-48                  .......m--REIRCGAC..NRLLAKG...E..A..V.N.-LSIKCPRCGTMNLLRATSPGYE-PKE----aps......................
F2BEV1_9NEIS/1-44                  .....mkh-----RCTHC..NKLLAVG...T..G..-.-.NFEIKCPRCKAVNRFS---------------slttqnaaehp..............
A0A0K8JJD2_9FIRM/14-59             .....tlp---SMRCKYC..NRLLYRG...V..V..Q.T.-IEIKCPKCGMIQL-----------------itgcergwstpa.............
V9HM18_9NEIS/4-41                  ......ce--QALRCQNC..NKKLAMA..mG..A..F.T.-ISIKCTRCKSLNLF----------------kf.......................
G2DMV5_9NEIS/3-37                  ......fy--RELRCPAC..GKLLAKG...S..G..-.-.SIQIKCHRCK---------------------kistfr...................
Q8P6J9_XANCP/1-51                  ........MLKNLRCGEC..ARLLCKA...G..A..F.D.EIQIKCPRCGTLNHLKAESLTSD-RRERIQE.........................
E6W2J6_DESIS/19-54                 ......al--PEVRCKRC..KRLLFKG...Y..V..V.E.-VEMKCPKCGAI-------------------qrfd.....................
L2F767_9GAMM/16-65                 .......a-MKQVNCRSC..GRLLAKI...G..S..F.N.NLEIKCPRCKAFNVLSVKNALSE--------aqetpi...................
A6VP54_ACTSZ/3-38                  .......g-LKEIRCKCC..NKLLART...K..N..V.Q.FLEIKCVRCKTIN------------------ky.......................
C1DBJ7_LARHH/4-53                  .....dlp---QIRCGAC..HRKLGEG...H..Y..R.V.-LVIKCPRCGALNHMKAAEP-----------lcrnaserpk...............
I9LIV9_9FIRM/13-55                 ......sn---ECRCSKC..NRLLFKG...Q..V..K.Y.-IEIQCPKCSLIQTIR---------------kgrslrli.................
COM_BPMU/1-55                      .......m--KSIRCKNC..NKLLFKA...D..S..F.D.HIEIRCPRCK---------------------rhiimlnacehptekhcgkrekith
G7QD21_9DELT/1-48                  .......m--REIRCGSC..NRLLAKG...E..A..L.D.-LSIKCPRCGTINLLRATSPGYE-PKE----aps......................
A0A037Z480_CLOTT/6-54              ......ke--KPIRCPHC..NQRLLDA...E..Y..V.V.-GTIKCPRCRNIIRLK---------------eipirsnleelnh............
B8DL07_DESVM/5-55                  .......t-QREVRCGNC..RRLLAKG...E..A..I.D.-LTIKCPRCGTLNHVRGMTPGTEGPRASIKE.........................
E6W232_DESIS/19-61                 .......a-LHEVRCKRC..NRLLFKG...S..V..I.S.-VEVKCPKCRS--------------------vqyfdysinaad.............
A0A0U1KZA8_9FIRM/14-53             .....dlp---AIRCTNC..NRLLYRG...V..A..Q.T.-IEIKCPKCGVVQLFKG--------------ger......................
M9X240_MANHA/5-41                  .....rli---EIRCKYC..QKLLAKA...K..D..V.Q.HLEIKCVRCKSINK-----------------fn.......................
J4TUG8_9PAST/3-39                  ......si--KTIRCTFC..NKLLAKV...G..T..V.G.YLEIKCPRCKVINFT----------------k........................
A0A037Z290_CLOTT/17-61             ......ke--KTIRCPHC..NQRLLDA...E..Y..V.V.-GTIKCPRCRN--------------------iirlneipirsnlk...........
A0A0G1TA97_9BACT/2-46              ......qf--QEYRCNSC..QKLLFKG...I..L..V.DsEVEVKCRGCGSLNTFRGVSQ-----------erl......................
D5CUF6_SIDLE/1-50                  ......me---TVRCGKC..NRKLAEG...E..Y..T.R.-LAIKCPRCGTLNQVSAESAKPERLGASIR-k........................
Q727X2_DESVH/6-56                  ........NRREVRCGHC..HRLLAKG...E..A..L.D.-LTIKCPRCGTLNHVRGMSPDAEGPRASDRS.........................
D9SPF5_CLOC7/11-53                 .....iid---EVRCPKC..NQLLLKA...E..Y..I.K.-GEIKCTRCKKIIELSMESKD----------ra.......................
I1YGG9_METFJ/1-49                  ......mi---EVRCGDC..GRLLARA...S..-..F.S.RIEIKCPRCKTLNSLRAIEPPTQ--------apasanv..................
F7KUT7_9FIRM/1-46                  .......m--KKIKCTKC..NQTLLLA...S..V..C.Q.-GEIKCHRCGTINKI----------------dyntkaransph.............
C1D8E4_LARHH/2-52                  ........NLTDIRCGQC..GRKLAAG...R..Y..I.E.-ISIKCPRCGALNHLKAVEPHNQNASE----rrka.....................
G4CJE2_9NEIS/1-44                  .....mkh-----RCKNC..NKLLAIG...K..G..-.-.EFEIKCPRCKTVNNFRSL-------------ttlpkaash................
#=GC seq_cons                      ...........plRCspC..s+LLs+u...p..s..h.s..lcIKCPRCtslNhh................t........................
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