GenomeNet

Database: Pfam
Entry: Neisseria_TspB
LinkDB: Neisseria_TspB
Original site: Neisseria_TspB 
#=GF ID   Neisseria_TspB
#=GF AC   PF05616.10
#=GF DE   Neisseria meningitidis TspB protein
#=GF AU   Moxon SJ
#=GF SE   Pfam-B_8925 (release 8.0)
#=GF GA   19.90 19.90;
#=GF TC   21.80 21.50;
#=GF NC   19.60 19.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR008708;
#=GF CC   This family consists of several Neisseria meningitidis TspB
#=GF CC   virulence factor proteins.
#=GF SQ   13
#=GS F6VSA1_ORNAN/57-157   AC F6VSA1.1
#=GS Q5F7K4_NEIG1/20-526   AC Q5F7K4.1
#=GS Q5F7B3_NEIG1/1-507    AC Q5F7B3.1
#=GS Q9JYK0_NEIMB/56-547   AC Q9JYK0.1
#=GS Q7DDP6_NEIMB/1-130    AC Q7DDP6.1
#=GS Q9JYD9_NEIMB/10-516   AC Q9JYD9.1
#=GS Q63PM4_BURPS/383-577  AC Q63PM4.1
#=GS F2JQ89_CELLD/19-203   AC F2JQ89.1
#=GS A1W3Z0_ACISJ/259-433  AC A1W3Z0.1
#=GS Q9JY49_NEIMB/25-501   AC Q9JY49.1
#=GS I4MKB8_9BURK/9-211    AC I4MKB8.1
#=GS F6VS94_ORNAN/57-157   AC F6VS94.1
#=GS A9BV75_DELAS/63-253   AC A9BV75.1
F6VSA1_ORNAN/57-157              .......ayaesapsvnqnl-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.---..-......---..--...----..KAEPDdKDKNK........D-EE....DTD..DSEGTAG.DS.SCVEA......QPE.GKKKKQRC.GFRDRK...V-LDFFPEVTYCP---------------------------.---------------------------------------------------------------lpntvilssyseprvlkacnfarsyeyl..............................................
Q5F7K4_NEIG1/20-526              ....................MMYSFE---ANANA-VKISETLSVDTGQGAKVHKFVPKSSNIYSSDLTKAVDLTHIPTGAKA--RINAKITASVSRAGVLSGVGKLVRQGAKFGTRAVPYVGTALLAHDVYETFKEDIQARGCRYDPETDKFVKGYEYANCLWYEDERRINRTYGCYGVDSSIMRLMPDRSRFPEVKQLMESQMYRLARPFWNWRKEELNKLSSLDWNNFVLNRCTFDWNGGGCAVNKGDDFRAGASFSLGRNPKYKEEMDAKKPEEILSLKVDADPDKYIEATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVAATFGRDAQGNTTADVQVIPRPDLTPASAEAPHAQPLPEVSPAENPA.NNP..D......PDE..NP...GTRP..NPEPD.PDLNP........DANP....DTD..GQPGTSP.DS.PAVPD......RPN.GRHRKERK.EGEDGG...LSCDYFPEILACQEMGKPSDRMFHDISIPQVTDDKTWSSH.NFLPSNGVCPQPKTFHVF----GRQYRASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLGGE..........................................................................
Q5F7B3_NEIG1/1-507               ....................MMYSFE---ANANA-VKISETLSVDTGQGAKVHKFVPKSSNIYSSDLTKAVDLTHIPTGAKA--RINAKITASVSRAGVLSGVGKLVRQGAKFGTRAVPYVGTALLAHDVYETFKEDIQARGCRYDPETDKFVKGYEYANCLWYEDERRINRTYGCYGVDSSIMRLMPDRSRFPEVKQLMESQMYRLARPFWNWRKEELNKLSSLDWNNFVLNRCTFDWNGGGCAVNKGDDFRAGASFSLGRNPKYKEEMDAKKPEEILSLKVDADPDKYIEATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVAATFGRDAQGNTTADVQVIPRPDLTPASAEAPHAQPLPEVSPAENPA.NNP..D......PDE..NP...GTRP..NPEPD.PDLNP........DANP....DTD..GQPGTSP.DS.PAVPD......RPN.GRHRKERK.EGEDGG...LSCDYFPEILACQEMGKPSDRMFHDISIPQVTDDKTWSSH.NFLPSNGVCPQPKTFHVF----GRQYRASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLGGE..........................................................................
Q9JYK0_NEIMB/56-547              .sddkrrriwkgvfdresgr------------------------------------------YLTSEAQDLKVRHVSTGASSTGKVSSVVSSSVSRAGVLAGVGKLARLGAKLSTRAVPYVGTALLAHDVYETFKEDIQAQGYQYDPETDKFVKGYEYSNCLWYEDKRRINRTYGCYGVDSSIMRLMSDDSRFPEVKELMESQMYRLARPFWNWHKEELNKLSSLDWNNFVLNSCTFDWNGGDCVVNKGDDFRNGADFSLIRNSKYKEEMDAKKLEEILSLKVDANPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVVATFGRDSQGNTTVDVQVIPRPDLTPGSAEAPNAQPLPEVSPAENPA.NNP..N......PNE..NP...GTSP..NPEPD.PDLNP........DANP....DTD..GQPGTRP.DS.PAVPG......RTN.GRDGKDGK.DGKDGG...LLCKFFPDILACDRL--PESNPAEDLNLPSETVNVEFQKS.GIFQDSAQCPAPVTFTVTVLDSSRQFAFSFENACTIAERLRYMLLALAWAVAAFFCIRTVSRE..........................................................................
Q7DDP6_NEIMB/1-130               ....................MMYSFE---ANANA-VKISETVSVDTGQGAKIHKFVPKNSKTYSSDLIKTVDLTHIPTGAKA--RINAKITASVSRAGVLAGVGKLARLGAKFSTRAVPYVGTALLAHDVYETFKEDIQARGYQYDPETDKFAK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.---..-......---..--...----..-----.-----........----....---..-------.--.-----......---.--------.------...----------------------------------------.---------------------------------------------------------------vs........................................................................
Q9JYD9_NEIMB/10-516              ....................YAERFKYPIGNSDVRLDIDHKKSVVTDFRVDGQRF--------SGRIIEPSIIEHVPTGARSLEKVPVKFTASVSRAAVLSGVGKLARLGAKLSTRAVPYVGTALLAHDVYETFKEDIQAQGYQYDPETDKFVKGYEYSNCLWYEDKRRINRTYGCYGVDSSIMRLMSDDSRFPEVKELMESQMYRLARPFWNWHKEELNKLSSLDWNNFVLNRCTFNWNGGDCLVNKGDDFRNGADFSLIRNSKYKEEMDAKKLEEILSLKVDANPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVVATFGRDSQGNTTVDVQVIPRPDLTPGSAEAPNAQPLPEVSPAENPA.NNP..N......PNE..NP...GTSP..NPEPD.PDLNP........DANP....DTD..GQPGTRP.DS.PAVPG......RTN.GRDGKDGK.DGKDGG...LLCKFFPDILACDRL--PESNPAEDLNLPSETVNVEFQKS.GIFQDSAQCPAPVTFTVTVLDSSRQFAFSFENACTIAERLRYMLLALAWAVAAFFCIRTVSRE..........................................................................
Q63PM4_BURPS/383-577             ....gdlftapahpgkqvvi------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPNVQPDPNANPNPNPG.TNPgtN......PGT..NP...GTNPgtNPGTN.PGTNP........STNP....GTDpsTNPGTNP.GTnPGTNP......GTN.PDPKPDPKpDPKPDP...KFCALYPDASACAPLG-----SANDVDVRRESKSVSLAPI.SIGLTNGVCPHPYEVEVF----GAPLRFDYAPICELAAKLRPLVLLLGALLAGLIFVT-----gltv......................................................................
F2JQ89_CELLD/19-203              ........asttfgsvnrnv---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAPSPSPIASPSAKPVPTVAPTTKPA.PTM..A......PTTkpAP...TMAP..TTKPA.PTMAP........TTKP....APT..MTPTTKP.AP.TMVPS......TKP.GPCTKPAQ.DQKAKP...FMLDNFKVIA------------------------------.---------------------------------------------------------------ntlaglgvdeakltsyikegkkledvlkvekistrkfkkcvikeynrvvdqavknkqltceqakqlkaaikqti
A1W3Z0_ACISJ/259-433             ...............vpmgn-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVPNPN.YDP..N......SPA..IP...ANQP..YFQPG.VRIVP........SPTPsnpwQVD..MQPVDRP.VG.SADPNpdpqpdPEP.GDGDKPR-.-PEEQQ...SLCEKHPDIVACQRLGDVQPE-----ALASKTVPVSIQKDdGFGPADGSCPAPKEFVIL----GKQMAFRWDLICDFASGIRPLLVGFAYLSAALA-FLG----lsrre.....................................................................
Q9JY49_NEIMB/25-501              .ihteynykfdkslnlnvle-------------------------------------------------------SSTGARSLEKVPVKVTASVSRAAVLSGVGKLARLGAKLSTRAVPYVGTALLAHDVYETFKEDIQAQGYQYDPETDKFVKGYEYSNCLWYEDKRRINRTYGCYGVDSSIMRLMSDDSRFPEVKELMESQMYRLARPFWNWHKEELNKLSSLDWNNFVLNRCTFNWNGGDCLVNKGDDFRNGADFSLIRNSKYKEEMDAKKLEEILSLKVDANPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVVATFGRDSQGNTTVDVQVIPRPDLTPGSAEAPNAQPLPEVSPAENPA.NNP..N......PNE..NP...GTSP..NPEPD.PDLNP........DANP....DTD..GQPGTRP.DS.PAVPD......RPN.GRHRKERK.EGEDGG...LLCDYFPEILACQEMGKPSDGMFHDISIPQVIDDKTWSSH.NFLPSNGVCPQPKTFHVF----GRQYQASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLKG-k.........................................................................
I4MKB8_9BURK/9-211               aiaqmqpspevlrdivqigd-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLPEVAPGDQTSlSNP..Q......PSP..SKtttTTQP..DGSTD.TTVCEtigvlqgmDIRL....EEH..CTTTSRD.NT.GTVTG......VTTtTTDQADPE.PGQQEGeqsLFCELFPNVLACAELGDPTGD-----DIPRSERSVSFEPE.VLF-GSGSCPADVTITSQGMTVTVGQWSSWCPY--ITTYMRPMVLLLAAFAALMIVLKGV---eg........................................................................
F6VS94_ORNAN/57-157              .......ayaesapsvnqnl-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.---..-......---..--...----..KAEPDdKDKNK........D-EE....DTD..DSEGTAG.DS.SCVEA......QPE.GKKKKQRC.GFRDRK...V-LDFFPEVTYCP---------------------------.---------------------------------------------------------------lpntvilssyseprvlkacnfarsyeyl..............................................
A9BV75_DELAS/63-253              ............pidlpvin-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSPAMQPQPLFVPTGNPV.QNPsyDpsaapgPNN..SP...YLQP..GIRVV.PSPAP........GAPW....QVD..LQPINRPvDS.PN-PDpn.pksDPN.PSD-GDKP.SEKDPG...L-CDMYPDILACKKLGDIEA-----KELPKKTIPLRIDKQ.NVGPENGSCPAPRQFEIM----GQSMAFQWDLLCDFATGIRPILIGFAWLSAALAFV------gltrr.....................................................................
#=GC seq_cons                    ...............h....................................................................................................................................................................................................................................................................................................................................................sPthpP.PpssPstNPu.sNP..s......Psp..sP...sspP..sscPD.PchNP........DssP....-TD..spPGTpP.DS.ssVPs......pss.GccpK-tp.sscDts...l.C-hFP-IlACtch...ps......slsp.p.shphp.p.shh.ssu.CPtPhphplh....utththpap.hC.hAptlR.hllhhhhh.uuhhhhh...............................................................................
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