GenomeNet

Database: Pfam
Entry: ORF11CD3
LinkDB: ORF11CD3
Original site: ORF11CD3 
#=GF ID   ORF11CD3
#=GF AC   PF10549.7
#=GF DE   ORF11CD3 domain
#=GF AU   Iyer LM, Bateman A
#=GF SE   Iyer LM
#=GF GA   25.00 25.00;
#=GF TC   25.30 27.60;
#=GF NC   24.90 23.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 17690987 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   11897024
#=GF RT   Extensive domain shuffling in transcription regulators of DNA
#=GF RT   viruses and implications for the origin of fungal APSES
#=GF RT   transcription factors. 
#=GF RA   Iyer LM, Koonin EV, Aravind L; 
#=GF RL   Genome Biol 2002;3:RESEARCH0012.
#=GF DR   INTERPRO; IPR018877;
#=GF CC   This domain was identified by Iyer and colleagues [1].
#=GF SQ   18
#=GS C1D8H3_LARHH/115-167      AC C1D8H3.1
#=GS Y23K_BPP22/144-197        AC P21417.1
#=GS C4K691_HAMD5/122-174      AC C4K691.1
#=GS E1VAW0_HALED/144-196      AC E1VAW0.1
#=GS W0H607_PSECI/104-154      AC W0H607.1
#=GS D3UWJ6_XENBS/123-171      AC D3UWJ6.1
#=GS B0USY3_HISS2/20-52        AC B0USY3.1
#=GS Q6FAE3_ACIAD/123-176      AC Q6FAE3.1
#=GS Y1412_HAEIN/119-171       AC P45197.1
#=GS A0A0A0Z1T9_9ENTR/122-175  AC A0A0A0Z1T9.1
#=GS U3U1G2_9ENTR/25-76        AC U3U1G2.1
#=GS Q9XJS9_BPD3/112-162       AC Q9XJS9.3
#=GS A0A0K1QYI1_PSEFL/111-158  AC A0A0K1QYI1.1
#=GS A0A024HNX3_PSEKB/117-170  AC A0A024HNX3.1
#=GS Q2L2X2_BORA1/116-168      AC Q2L2X2.1
#=GS B0VTV5_ACIBS/146-197      AC B0VTV5.1
#=GS R5QDT2_9BURK/117-168      AC R5QDT2.1
#=GS N9GFP6_ACIHA/91-140       AC N9GFP6.1
C1D8H3_LARHH/115-167                 ..SLMAEWYEAKAELDDQQRFASLCGRGLNDH.KQRKSVLTQHVMQVAERIQPSLP...
Y23K_BPP22/144-197                   ..SYEAERNAIMLEYMKEKDVASMSGRLLNRWgKIKKPQLLARIGRLEQHGQTVIP...
C4K691_HAMD5/122-174                 ..SIMQELNTACAELKTDKAIASLFGTGLSEW.KNIKAAHTKKVKGLIEEAQLLLT...
E1VAW0_HALED/144-196                 ..SLRHQFDVAVYDLQQQDRRGSTAGRELAQH.RWVKPPLVQKVESLREQLQMTLA...
W0H607_PSECI/104-154                 .k---QNFDLACKALDDGKDIASLSGRELSKW.KQKKPRLEYQVAYWRDQLQMTL-g..
D3UWJ6_XENBS/123-171                 ..SVMEELNEACAEFKRDKQIASVFGTGLNAW.KHVSVEHKSKIRGLTEEI-----a..
B0USY3_HISS2/20-52                   .y---------------------SCGKALNEW.KGKKPVLEGVIRIMEDKMQIELP...
Q6FAE3_ACIAD/123-176                 .g-LMDQFNKASIEFDKFSEIASSAGRTLSIVgKQYKPQAKQKVEELKTKVQPHLT...
Y1412_HAEIN/119-171                  ..SLMHKYNELCIEHKAKKAFASLCGKGLREW.KGDKPVLEATLKLFEDKMQIELP...
A0A0A0Z1T9_9ENTR/122-175             .n-LEAERNAAVLEFMKEKDVASMSGRLLNRWgRVKKPQLLARIERIDQHGQITIP...
U3U1G2_9ENTR/25-76                   sl---QELNTACAELKTDKSIASLFGTRLSEW.ENIKAAHTKKVKGLIEEAQLLLT...
Q9XJS9_BPD3/112-162                  .k---QAFDRACKQLEDGRQLASLHGKGLADW.KFKKPMLEHRVDEMRDRLQMVL-g..
A0A0K1QYI1_PSEFL/111-158             .r-----YGHACQTLEARKKEASSSGRRLAHW.RYDKPSVYQHVAHLREQLK----lpl
A0A024HNX3_PSEKB/117-170             ..SYEQMRNELLFEFKQEKAVASLAGKTLKRW.QLKKPEIEGRILAVELEGQHQL-ql.
Q2L2X2_BORA1/116-168                 ..SLIQEWFEAKAAVDAQDRFASLCGRGLSEH.RRNRPPLMQRLSTIAERMQPQL-r..
B0VTV5_ACIBS/146-197                 .a-LIQQREALNAKLECEKEIASSCGKGLATW.KKQRDCLTTAIANVDRQIQPCL-...
R5QDT2_9BURK/117-168                 .c--MKDYLKAYAIYEQGKAIASQAGKTLSQW.GRVKQPTEAQLRIMEDQIQLSI-k..
N9GFP6_ACIHA/91-140                  ye----ELNLLHLQAKIQKAIGSFHGKGLNQH.KSTMKYLNQKISKYEEDLQLKL-...
#=GC seq_cons                        ...h.pphspAshchcppKplAShsG+sLscW.KtpKP.Lpp+lptlc-chQhpL....
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