GenomeNet

Database: Pfam
Entry: PF08238
LinkDB: PF08238
Original site: PF08238 
#=GF ID   Sel1
#=GF AC   PF08238.9
#=GF DE   Sel1 repeat
#=GF AU   Bateman A
#=GF SE   Pfam-B_49 (Release 17.0)
#=GF GA   30.70 2.40;
#=GF TC   30.70 6.20;
#=GF NC   30.60 -999999.99;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Repeat
#=GF WK   Cytochrome_c_oxidase
#=GF RN   [1]
#=GF RM   8722778
#=GF RT   The Caenorhabditis elegans sel-1 gene, a negative regulator of
#=GF RT   lin-12 and glp-1, encodes a predicted extracellular protein. 
#=GF RA   Grant B, Greenwald I; 
#=GF RL   Genetics 1996;143:237-247.
#=GF DR   INTERPRO; IPR006597;
#=GF CC   This short repeat is found in the Sel1 protein [1].  It is
#=GF CC   related to TPR repeats.
#=GF SQ   28352
#=GS U9T7E2_RHIID/503-538        AC U9T7E2.1
#=GS G1XRF1_ARTOA/149-184        AC G1XRF1.1
#=GS F6UIU7_XENTR/312-345        AC F6UIU7.1
#=GS U9TAB6_RHIID/172-206        AC U9TAB6.1
#=GS D0MQH2_PHYIT/171-202        AC D0MQH2.1
#=GS Q6N5V8_RHOPA/164-199        AC Q6N5V8.1
#=GS U9TY14_RHIID/29-63          AC U9TY14.1
#=GS A1T0W3_PSYIN/337-372        AC A1T0W3.1
#=GS A0A098GEH6_TATMI/120-155    AC A0A098GEH6.1
#=GS E9EV13_METRA/673-712        AC E9EV13.1
#=GS E3QFD6_COLGM/712-748        AC E3QFD6.1
#=GS A0A0C4DKZ5_MAGP6/640-675    AC A0A0C4DKZ5.1
#=GS A2EGN3_TRIVA/703-738        AC A2EGN3.1
#=GS B0BMM0_XENTR/204-239        AC B0BMM0.1
#=GS F0XHD2_GROCL/652-689        AC F0XHD2.1
#=GS A7ID16_XANP2/226-261        AC A7ID16.1
#=GS K0RPR1_THAOC/124-150        AC K0RPR1.1
#=GS U9UFD4_RHIID/253-286        AC U9UFD4.1
#=GS U9UKA7_RHIID/408-443        AC U9UKA7.1
#=GS D8PGB0_9BACT/87-122         AC D8PGB0.1
#=GS K3X6E8_PYTUL/412-447        AC K3X6E8.1
#=GS U9TKZ9_RHIID/54-87          AC U9TKZ9.1
#=GS U9U456_RHIID/302-337        AC U9U456.1
#=GS Q8E9X3_SHEON/396-432        AC Q8E9X3.1
#=GS U9T7C1_RHIID/300-335        AC U9T7C1.1
#=GS U9UK80_RHIID/152-185        AC U9UK80.1
#=GS F8JE28_HYPSM/778-813        AC F8JE28.1
#=GS K0S3A1_THAOC/266-293        AC K0S3A1.1
#=GS U9SLQ5_RHIID/28-63          AC U9SLQ5.1
#=GS A4Z1F9_BRASO/70-104         AC A4Z1F9.1
#=GS U3JJX0_FICAL/217-250        AC U3JJX0.1
#=GS F0YF07_AURAN/1-27           AC F0YF07.1
#=GS R5HEG1_9FIRM/99-131         AC R5HEG1.1
#=GS R7L682_9BACT/218-253        AC R7L682.1
#=GS D4H4D2_DENA2/39-73          AC D4H4D2.1
#=GS U9UG78_RHIID/297-332        AC U9UG78.1
#=GS M3XQS9_MUSPF/443-478        AC M3XQS9.1
#=GS U9TLP6_RHIID/766-801        AC U9TLP6.1
#=GS B2GEM9_LACF3/73-108         AC B2GEM9.1
#=GS B9IEC9_POPTR/551-586        AC B9IEC9.1
#=GS G8BUI5_TETPH/179-209        AC G8BUI5.1
#=GS K0T2J5_THAOC/54-80          AC K0T2J5.1
#=GS A5DZK4_LODEL/531-567        AC A5DZK4.1
#=GS U9TBF3_RHIID/301-343        AC U9TBF3.1
#=GS Q6CT65_KLULA/182-226        AC Q6CT65.1
#=GS M9SKQ3_9EURY/150-185        AC M9SKQ3.2
#=GS U9STX4_RHIID/339-372        AC U9STX4.1
#=GS E1BPN8_BOVIN/147-183        AC E1BPN8.1
#=GS C5GQC9_AJEDR/737-772        AC C5GQC9.1
#=GS Q5FT06_GLUOX/283-318        AC Q5FT06.1
#=GS Q9K4B3_STRCO/116-147        AC Q9K4B3.1
#=GS I1BSM2_RHIO9/297-336        AC I1BSM2.1
#=GS K0TI24_THAOC/155-191        AC K0TI24.1
#=GS K4LG90_THEPS/480-515        AC K4LG90.1
#=GS E4WYT4_OIKDI/100-133        AC E4WYT4.1
#=GS G8BUI5_TETPH/139-176        AC G8BUI5.1
#=GS J3NRV3_GAGT3/602-634        AC J3NRV3.1
#=GS A0A0A7ELT2_9GAMM/51-86      AC A0A0A7ELT2.1
#=GS U9UB68_RHIID/61-95          AC U9UB68.1
#=GS F9WJ45_TRYCI/108-140        AC F9WJ45.1
#=GS E0VFG7_PEDHC/181-207        AC E0VFG7.1
#=GS E3K300_PUCGT/716-751        AC E3K300.2
#=GS A1C4A1_ASPCL/389-426        AC A1C4A1.1
#=GS A0A0D1DWR8_USTMA/649-684    AC A0A0D1DWR8.1
#=GS A4VEN5_TETTS/665-699        AC A4VEN5.1
#=GS M2NHX6_BAUCO/151-186        AC M2NHX6.1
#=GS K0TNT6_THAOC/122-158        AC K0TNT6.1
#=GS U9T962_RHIID/522-557        AC U9T962.1
#=GS U9T1L2_RHIID/178-213        AC U9T1L2.1
#=GS D2W1V3_NAEGR/490-525        AC D2W1V3.1
#=GS K0TH99_THAOC/11-47          AC K0TH99.1
#=GS A0A0D3F253_9ORYZ/129-162    AC A0A0D3F253.1
#=GS A0A087Y348_POEFO/448-483    AC A0A087Y348.2
#=GS D6YWV9_WADCW/435-470        AC D6YWV9.1
#=GS H2MNS7_ORYLA/680-712        AC H2MNS7.1
#=GS A0A0B5DFE0_9ACTN/132-160    AC A0A0B5DFE0.1
#=GS G3RB54_GORGO/245-276        AC G3RB54.1
#=GS F6QKZ6_MACMU/291-324        AC F6QKZ6.1
#=GS A0A044V4E0_ONCVO/446-481    AC A0A044V4E0.1
#=GS K0R058_THAOC/222-253        AC K0R058.1
#=GS U9URR5_RHIID/22-57          AC U9URR5.1
#=GS B0WSM9_CULQU/108-143        AC B0WSM9.1
#=GS Q4KID5_PSEF5/148-183        AC Q4KID5.2
#=GS Q6CT65_KLULA/329-372        AC Q6CT65.1
#=GS A0A098GID0_TATMI/502-537    AC A0A098GID0.1
#=GS Q8KDT6_CHLTE/191-226        AC Q8KDT6.1
#=GS F0YEV4_AURAN/539-575        AC F0YEV4.1
#=GS K0SIF7_THAOC/168-203        AC K0SIF7.1
#=GS K0THA3_THAOC/280-316        AC K0THA3.1
#=GS J7Q989_METSZ/91-126         AC J7Q989.1
#=GS Q1IIR7_KORVE/128-163        AC Q1IIR7.1
#=GS R5FTZ2_9FIRM/129-164        AC R5FTZ2.1
#=GS F7HMQ4_CALJA/185-221        AC F7HMQ4.1
#=GS M3ATF0_SPHMS/158-193        AC M3ATF0.1
#=GS K0TBD8_THAOC/215-251        AC K0TBD8.1
#=GS D2UZ38_NAEGR/45-82          AC D2UZ38.1
#=GS D2H2E3_AILME/147-183        AC D2H2E3.1
#=GS L2G2M7_COLGN/608-645        AC L2G2M7.1
#=GS K0TLL1_THAOC/170-205        AC K0TLL1.1
#=GS G1XLT4_ARTOA/761-798        AC G1XLT4.1
#=GS F0ZAJ6_DICPU/526-554        AC F0ZAJ6.1
#=GS Q2HEG3_CHAGB/364-399        AC Q2HEG3.1
#=GS K0R7N6_THAOC/28-59          AC K0R7N6.1
#=GS A0A0C5X1D5_9GAMM/151-186    AC A0A0C5X1D5.1
#=GS U9UFD4_RHIID/180-214        AC U9UFD4.1
#=GS D7G201_ECTSI/638-673        AC D7G201.1
#=GS G2Q1H1_THIHA/635-672        AC G2Q1H1.1
#=GS F4S0R3_MELLP/153-188        AC F4S0R3.1
#=GS F4PHY3_DICFS/503-538        AC F4PHY3.1
#=GS B9M9A0_GEODF/203-238        AC B9M9A0.1
#=GS X2H670_9NEIS/93-128         AC X2H670.1
#=GS A4Z2F3_BRASO/1016-1051      AC A4Z2F3.1
#=GS C1GFA1_PARBD/232-267        AC C1GFA1.1
#=GS A5N3Z5_CLOK5/749-784        AC A5N3Z5.1
#=GS U9T555_RHIID/185-220        AC U9T555.1
#=GS B8M4L5_TALSN/735-771        AC B8M4L5.1
#=GS U9SX39_RHIID/561-595        AC U9SX39.1
#=GS Q8ZP41_SALTY/420-453        AC Q8ZP41.1
#=GS U9U5T6_RHIID/253-288        AC U9U5T6.1
#=GS Q4DSI6_TRYCC/519-554        AC Q4DSI6.1
#=GS K0TAZ4_THAOC/11-47          AC K0TAZ4.1
#=GS R1FHL5_EMIHU/215-250        AC R1FHL5.1
#=GS U9SW58_RHIID/232-267        AC U9SW58.1
#=GS U9V2C0_RHIID/57-92          AC U9V2C0.1
#=GS W1PH03_AMBTC/100-133        AC W1PH03.1
#=GS A2DJW6_TRIVA/910-938        AC A2DJW6.1
#=GS B3ESW0_AMOA5/532-565        AC B3ESW0.1
#=GS Q6LPM5_PHOPR/157-192        AC Q6LPM5.1
#=GS K0T2Z9_THAOC/147-183        AC K0T2Z9.1
#=GS B1M2Q5_METRJ/900-935        AC B1M2Q5.1
#=GS F4Q5V7_DICFS/373-398        AC F4Q5V7.1
#=GS U9TZ64_RHIID/462-495        AC U9TZ64.1
#=GS Q5NRI6_ZYMMO/334-369        AC Q5NRI6.1
#=GS F8BSL9_OLICO/902-937        AC F8BSL9.1
#=GS U9TM02_RHIID/1280-1315      AC U9TM02.1
#=GS K0R8E2_THAOC/16-47          AC K0R8E2.1
#=GS C0NDI8_AJECG/463-498        AC C0NDI8.1
#=GS W5PWT6_SHEEP/28-63          AC W5PWT6.1
#=GS COA7_CAEEL/71-94            AC Q23450.1
#=GS E8RT87_ASTEC/64-99          AC E8RT87.1
#=GS F8KQJ4_HELBC/167-197        AC F8KQJ4.1
#=GS S8EFH6_FOMPI/309-346        AC S8EFH6.1
#=GS Q3SNZ9_NITWN/208-243        AC Q3SNZ9.1
#=GS A4S8G6_OSTLU/135-171        AC A4S8G6.1
#=GS U9TL98_RHIID/141-175        AC U9TL98.1
#=GS D2VYX5_NAEGR/1274-1311      AC D2VYX5.1
#=GS D4KZU6_9FIRM/443-476        AC D4KZU6.1
#=GS E6X143_NITSE/49-78          AC E6X143.1
#=GS U9V7X2_RHIID/927-959        AC U9V7X2.1
#=GS A4S8G6_OSTLU/434-464        AC A4S8G6.1
#=GS A1T0W3_PSYIN/193-228        AC A1T0W3.1
#=GS K8WM16_9ENTR/81-116         AC K8WM16.1
#=GS A0E0B4_PARTE/263-298        AC A0E0B4.1
#=GS U9T080_RHIID/311-346        AC U9T080.1
#=GS K4RLU8_HELHE/286-322        AC K4RLU8.1
#=GS U9SIE6_RHIID/322-357        AC U9SIE6.1
#=GS J9D8S7_EDHAE/441-473        AC J9D8S7.1
#=GS C4YNU7_CANAW/592-627        AC C4YNU7.1
#=GS U9TK21_RHIID/329-364        AC U9TK21.1
#=GS F0Y0Z4_AURAN/1-15           AC F0Y0Z4.1
#=GS X2HCI5_9NEIS/201-236        AC X2HCI5.1
#=GS R7DPS9_9FIRM/259-294        AC R7DPS9.1
#=GS S8A2E4_DACHA/791-828        AC S8A2E4.1
#=GS A7TQD7_VANPO/352-388        AC A7TQD7.1
#=GS C1N4D8_MICPC/71-106         AC C1N4D8.1
#=GS W1QGV1_OGAPD/750-785        AC W1QGV1.1
#=GS U9SXG8_RHIID/149-183        AC U9SXG8.1
#=GS H3B6B2_LATCH/253-281        AC H3B6B2.1
#=GS F7HTA9_CALJA/31-66          AC F7HTA9.1
#=GS A0A090BU26_9GAMM/417-452    AC A0A090BU26.1
#=GS U9TSH3_RHIID/67-102         AC U9TSH3.1
#=GS R1E9Y7_BOTPV/132-167        AC R1E9Y7.1
#=GS I1CBX1_RHIO9/186-222        AC I1CBX1.1
#=GS A4Z393_BRASO/551-586        AC A4Z393.1
#=GS A6R621_AJECN/619-657        AC A6R621.1
#=GS A2F2C9_TRIVA/443-477        AC A2F2C9.1
#=GS D2VAQ2_NAEGR/437-471        AC D2VAQ2.1
#=GS HCPE_HELPY/202-238          AC O25021.1
#=GS W0SJD2_9RHOO/131-166        AC W0SJD2.1
#=GS E1BNT3_BOVIN/590-622        AC E1BNT3.2
#=GS T1IM72_STRMM/367-402        AC T1IM72.1
#=GS U9TSP7_RHIID/617-652        AC U9TSP7.1
#=GS U9TBM1_RHIID/192-227        AC U9TBM1.1
#=GS D7SJC2_VITVI/219-255        AC D7SJC2.1
#=GS U9UQE1_RHIID/1-31           AC U9UQE1.1
#=GS Q5KGQ9_CRYNJ/207-239        AC Q5KGQ9.1
#=GS B8ILP5_METNO/75-110         AC B8ILP5.1
#=GS U9U4W6_RHIID/57-92          AC U9U4W6.1
#=GS Q89KY6_BRADU/187-223        AC Q89KY6.1
#=GS I1BHR6_RHIO9/503-545        AC I1BHR6.1
#=GS M1BLM1_SOLTU/29-64          AC M1BLM1.1
#=GS M3YB38_MUSPF/483-518        AC M3YB38.1
#=GS W5DWX4_WHEAT/401-436        AC W5DWX4.1
#=GS A0A0C4EP86_PUCT1/508-544    AC A0A0C4EP86.1
#=GS U9V2C0_RHIID/9-41           AC U9V2C0.1
#=GS K0RDT0_THAOC/1-22           AC K0RDT0.1
#=GS R7D1G0_9BACE/212-247        AC R7D1G0.1
#=GS M9MG31_PSEA3/425-460        AC M9MG31.1
#=GS E5UL25_NEIMU/77-112         AC E5UL25.1
#=GS G2R535_THITE/819-857        AC G2R535.1
#=GS U9UYB9_RHIID/404-439        AC U9UYB9.1
#=GS SE1L2_HUMAN/216-247         AC Q5TEA6.2
#=GS M1VZP3_CLAP2/652-685        AC M1VZP3.1
#=GS I0DYV0_PROSM/110-147        AC I0DYV0.1
#=GS K8WWM8_PRORE/113-143        AC K8WWM8.1
#=GS V2UUR0_9GAMM/89-124         AC V2UUR0.1
#=GS U9U5R6_RHIID/791-826        AC U9U5R6.1
#=GS G8ZRA8_TORDC/242-277        AC G8ZRA8.1
#=GS D3AXQ9_POLPA/353-378        AC D3AXQ9.1
#=GS G3ATP7_SPAPN/529-553        AC G3ATP7.1
#=GS U9TH17_RHIID/33-65          AC U9TH17.1
#=GS W1PH03_AMBTC/166-199        AC W1PH03.1
#=GS A2E0A7_TRIVA/2173-2208      AC A2E0A7.1
#=GS Q8P740_XANCP/143-178        AC Q8P740.1
#=GS U9U2Q1_RHIID/62-95          AC U9U2Q1.1
#=GS R7F4D6_9BACT/62-97          AC R7F4D6.1
#=GS A0A0C4F334_PUCT1/657-685    AC A0A0C4F334.1
#=GS U9TBR5_RHIID/646-681        AC U9TBR5.1
#=GS M5BNP8_THACB/800-835        AC M5BNP8.1
#=GS A0A098G400_9GAMM/48-83      AC A0A098G400.1
#=GS N4V8P9_COLOR/333-362        AC N4V8P9.1
#=GS K0RHG6_THAOC/11-47          AC K0RHG6.1
#=GS U9TGS5_RHIID/671-696        AC U9TGS5.1
#=GS D2H2E3_AILME/186-214        AC D2H2E3.1
#=GS U9T840_RHIID/299-331        AC U9T840.1
#=GS F2SJ33_TRIRC/257-292        AC F2SJ33.1
#=GS U9TXN5_RHIID/278-309        AC U9TXN5.1
#=GS R1DKU5_EMIHU/72-108         AC R1DKU5.1
#=GS K0RGZ6_THAOC/200-235        AC K0RGZ6.1
#=GS K1VTH2_TRIAC/541-577        AC K1VTH2.1
#=GS F2UTL2_SALR5/104-143        AC F2UTL2.1
#=GS U9STH9_RHIID/89-124         AC U9STH9.1
#=GS H0PV75_9RHOO/80-116         AC H0PV75.1
#=GS K0QZH0_THAOC/208-244        AC K0QZH0.1
#=GS G9N9H1_HYPVG/492-529        AC G9N9H1.1
#=GS E3LNK9_CAERE/93-130         AC E3LNK9.1
#=GS A0A0B1P4Y6_UNCNE/448-483    AC A0A0B1P4Y6.1
#=GS K8WMA1_9ENTR/220-255        AC K8WMA1.1
#=GS F9XAK4_ZYMTI/414-453        AC F9XAK4.1
#=GS K0TNJ2_THAOC/162-193        AC K0TNJ2.1
#=GS A0A022R598_ERYGU/290-325    AC A0A022R598.1
#=GS C3Z964_BRAFL/540-574        AC C3Z964.1
#=GS K0RDX9_THAOC/144-179        AC K0RDX9.1
#=GS E8RT87_ASTEC/100-131        AC E8RT87.1
#=GS M7NVM2_PNEMU/640-672        AC M7NVM2.1
#=GS A0A0C4YG14_9BURK/129-162    AC A0A0C4YG14.1
#=GS W0TR85_9GAMM/346-381        AC W0TR85.1
#=GS A0A0A7LB83_9EURY/141-176    AC A0A0A7LB83.1
#=GS A4YMA4_BRASO/189-224        AC A4YMA4.1
#=GS U9TRD2_RHIID/326-353        AC U9TRD2.1
#=GS G3U8P8_LOXAF/311-346        AC G3U8P8.1
#=GS A0A0D5E7N8_9BURK/86-120     AC A0A0D5E7N8.1
#=GS A5DFF6_PICGU/354-392        AC A5DFF6.2
#=GS F6WFA0_MACMU/348-383        AC F6WFA0.1
#=GS Q5B7N5_EMENI/428-463        AC Q5B7N5.1
#=GS M4BEZ8_HYAAE/68-102         AC M4BEZ8.1
#=GS K0TA69_THAOC/544-572        AC K0TA69.1
#=GS N8THW0_ACIGI/337-369        AC N8THW0.1
#=GS N1RM77_FUSC4/182-218        AC N1RM77.1
#=GS I7H563_9HELI/84-117         AC I7H563.1
#=GS B4M0F8_DROVI/621-655        AC B4M0F8.1
#=GS F0SUZ0_SYNGF/776-811        AC F0SUZ0.1
#=GS B3ESR0_AMOA5/792-826        AC B3ESR0.1
#=GS A8AN17_CITK8/142-174        AC A8AN17.1
#=GS J3NI89_GAGT3/478-512        AC J3NI89.1
#=GS R7IA32_9BURK/195-230        AC R7IA32.1
#=GS F0JGT4_DESDE/112-147        AC F0JGT4.1
#=GS K5VKC0_AGABU/281-312        AC K5VKC0.1
#=GS G8SLQ6_ACTS5/362-392        AC G8SLQ6.1
#=GS G1KHM3_ANOCA/147-183        AC G1KHM3.2
#=GS B3EU70_AMOA5/384-419        AC B3EU70.1
#=GS F9G3Z2_FUSOF/709-745        AC F9G3Z2.1
#=GS R1DSD6_EMIHU/318-354        AC R1DSD6.1
#=GS U9TNN9_RHIID/145-168        AC U9TNN9.1
#=GS U4LSS5_PYROM/507-543        AC U4LSS5.1
#=GS C5MBN1_CANTT/1218-1253      AC C5MBN1.1
#=GS B9JG93_AGRRK/230-265        AC B9JG93.1
#=GS U9UAY5_RHIID/226-260        AC U9UAY5.1
#=GS B4SCH9_PELPB/83-118         AC B4SCH9.1
#=GS G9P3R6_HYPAI/445-484        AC G9P3R6.1
#=GS R5Q1I7_9PROT/85-119         AC R5Q1I7.1
#=GS K7TU54_MAIZE/243-269        AC K7TU54.1
#=GS E7A2A2_SPORE/751-787        AC E7A2A2.1
#=GS G4TBM4_PIRID/355-381        AC G4TBM4.1
#=GS D2VPQ0_NAEGR/313-348        AC D2VPQ0.1
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#=GS U9TGS5_RHIID/111-146        AC U9TGS5.1
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#=GS A0L7U9_MAGMM/582-617        AC A0L7U9.1
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