GenomeNet

Database: Pfam
Entry: PMBR
LinkDB: PMBR
Original site: PMBR 
#=GF ID   PMBR
#=GF AC   PF09373.8
#=GF DE   Pseudomurein-binding repeat
#=GF AU   Steenbakkers P, Bateman A
#=GF SE   Pfam-B_12784 (Release 21.0)
#=GF GA   24.90 24.90;
#=GF TC   25.20 25.10;
#=GF NC   24.80 24.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 17690987 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Repeat
#=GF DR   INTERPRO; IPR018975;
#=GF CC   Methanothermobacter thermautotrophicus is a methanogenic
#=GF CC   Gram-positive microorganism with a cell wall consisting of
#=GF CC   pseudomurein. This repeat specifically binds to pseudomurein.
#=GF CC   This repeat is found at the N terminus of PeiW and PeiP which
#=GF CC   are pseudomurein binding phage proteins.
#=GF SQ   86
#=GS O26512_METTH/375-407      AC O26512.1
#=GS O26812_METTH/1723-1755    AC O26812.1
#=GS U6EDU9_9EURY/34-65        AC U6EDU9.1
#=GS F0TA69_METLA/72-102       AC F0TA69.1
#=GS O26459_METTH/223-255      AC O26459.1
#=GS O26939_METTH/524-558      AC O26939.1
#=GS E3GWB3_METFV/283-312      AC E3GWB3.1
#=GS O26623_METTH/117-149      AC O26623.1
#=GS O26512_METTH/191-223      AC O26512.1
#=GS O26512_METTH/342-374      AC O26512.1
#=GS A5ULB3_METS3/907-937      AC A5ULB3.1
#=GS Q2GBR1_NOVAD/633-665      AC Q2GBR1.1
#=GS F0T9S8_METLA/166-198      AC F0T9S8.1
#=GS Q2NH69_METST/7-39         AC Q2NH69.1
#=GS O26190_METTH/106-138      AC O26190.1
#=GS F0TA56_METLA/414-446      AC F0TA56.1
#=GS F6D649_METPW/600-632      AC F6D649.1
#=GS E3GWB3_METFV/548-580      AC E3GWB3.1
#=GS A3WDF6_9SPHN/597-628      AC A3WDF6.1
#=GS A0A0E4GCY4_9FIRM/108-139  AC A0A0E4GCY4.1
#=GS A5UJP6_METS3/1286-1318    AC A5UJP6.1
#=GS E3GYN2_METFV/104-135      AC E3GYN2.1
#=GS O26939_METTH/491-523      AC O26939.1
#=GS O26459_METTH/67-99        AC O26459.1
#=GS F6D649_METPW/677-709      AC F6D649.1
#=GS O26812_METTH/1613-1645    AC O26812.1
#=GS O26812_METTH/1690-1720    AC O26812.1
#=GS D3E2B4_METRM/210-242      AC D3E2B4.1
#=GS F0TC22_METLA/123-152      AC F0TC22.1
#=GS E3GZJ4_METFV/121-150      AC E3GZJ4.1
#=GS U6ECM8_9EURY/219-250      AC U6ECM8.1
#=GS Q2NF92_METST/416-448      AC Q2NF92.1
#=GS O26815_METTH/432-464      AC O26815.1
#=GS U6EDU9_9EURY/1-32         AC U6EDU9.1
#=GS O26401_METTH/103-135      AC O26401.1
#=GS F0TA69_METLA/130-162      AC F0TA69.1
#=GS F6D7H3_METPW/831-863      AC F6D7H3.1
#=GS F0TA56_METLA/381-413      AC F0TA56.1
#=GS F6D649_METPW/431-463      AC F6D649.1
#=GS O26459_METTH/332-364      AC O26459.1
#=GS O26220_METTH/271-303      AC O26220.1
#=GS E3GWB3_METFV/443-475      AC E3GWB3.1
#=GS F0T9A8_METLA/163-195      AC F0T9A8.1
#=GS F0T886_METLA/60-92        AC F0T886.1
#=GS F6D7H3_METPW/1135-1167    AC F6D7H3.1
#=GS F0T7K4_METLA/147-176      AC F0T7K4.1
#=GS F0T900_METLA/102-133      AC F0T900.1
#=GS O26190_METTH/139-171      AC O26190.1
#=GS U6ECM8_9EURY/85-116       AC U6ECM8.1
#=GS O26247_METTH/3-35         AC O26247.1
#=GS F6D649_METPW/508-540      AC F6D649.1
#=GS F6D7H3_METPW/910-938      AC F6D7H3.1
#=GS O26457_METTH/550-582      AC O26457.1
#=GS O26512_METTH/224-256      AC O26512.1
#=GS O26459_METTH/299-331      AC O26459.1
#=GS Q8P8X7_XANCP/636-667      AC Q8P8X7.1
#=GS O26815_METTH/542-574      AC O26815.1
#=GS F0TA78_METLA/95-127       AC F0TA78.1
#=GS O26457_METTH/447-479      AC O26457.1
#=GS O26459_METTH/167-199      AC O26459.1
#=GS O26401_METTH/139-171      AC O26401.1
#=GS Q0BRY6_GRABC/633-663      AC Q0BRY6.1
#=GS O26886_METTH/137-169      AC O26886.1
#=GS O26886_METTH/104-136      AC O26886.1
#=GS R9SJM8_9EURY/1150-1180    AC R9SJM8.1
#=GS A0A0E4GB20_9FIRM/67-99    AC A0A0E4GB20.1
#=GS F0TCV1_METLA/141-171      AC F0TCV1.1
#=GS Q2NH69_METST/40-72        AC Q2NH69.1
#=GS F6D696_METPW/660-692      AC F6D696.1
#=GS F6D7H3_METPW/1288-1319    AC F6D7H3.1
#=GS O26457_METTH/517-549      AC O26457.1
#=GS Q2NG85_METST/311-343      AC Q2NG85.1
#=GS F0T7M7_METLA/59-89        AC F0T7M7.1
#=GS F0T6C1_METLA/132-162      AC F0T6C1.1
#=GS E3GWB3_METFV/517-547      AC E3GWB3.1
#=GS Q2NG85_METST/416-449      AC Q2NG85.1
#=GS U6EC32_9EURY/394-425      AC U6EC32.1
#=GS O26815_METTH/509-539      AC O26815.1
#=GS O26179_METTH/139-171      AC O26179.1
#=GS O26179_METTH/106-138      AC O26179.1
#=GS F0TC25_METLA/104-136      AC F0TC25.1
#=GS D3E3E6_METRM/2-32         AC D3E3E6.1
#=GS O26247_METTH/36-68        AC O26247.1
#=GS O26886_METTH/33-65        AC O26886.1
#=GS F0TAI6_METLA/115-145      AC F0TAI6.1
#=GS U6ECM8_9EURY/162-194      AC U6ECM8.1
O26512_METTH/375-407                 ..t-IGKISSDNLVYAVARILKF.QKDNSRL..PNYVTI....
O26812_METTH/1723-1755               ..g-LGRIPFQRLVYMYSKIIKF.YGTNKRL..PNYVTI....
U6EDU9_9EURY/34-65                   .gc---RIYKKEYIDMIERVNKF.FLQMGRN..PESVDI....
F0TA69_METLA/72-102                  .ng----LTLTQMKDGISRAEAF.YKKNGRL..PNY---lsf.
O26459_METTH/223-255                 gns---GFTREQILAAANSLKNY.IDRNQSL..PGYVQV....
O26939_METTH/524-558                 ..g-ADKIGRDEYTAMFAQIIQN.HTERSKMvfPSSVKV....
E3GWB3_METFV/283-312                 ..d----VSINQIKDAAARVTKF.IDVNNRL..PRYVKI....
O26623_METTH/117-149                 ..d-TATLTESEYLDMAERTYTW.MESHGRS..PNHVGI....
O26512_METTH/191-223                 ..a-TGQLSKSAYLKLASSVLKF.INSNRRA..PNYVS-s...
O26512_METTH/342-374                 ..a-TGQLSKSAYLKLASSVLKF.INSNRRA..PNYVS-s...
A5ULB3_METS3/907-937                 ...--GTITFDGLVYAFARVVAF.YGNNQQL..PAYVTI....
Q2GBR1_NOVAD/633-665                 .kk--TKITPDEAKDLAGRAVRF.KRERGRL..PSII--aa..
F0T9S8_METLA/166-198                 ..t-SATIIKSDYVDIASRTVTW.MDNYKNA..PNYVGI....
Q2NH69_METST/7-39                    .vk--KELTKEEYSDFIKKVISI.NEKQKSM..PSYVMI....
O26190_METTH/106-138                 ...GTGTLQKAGYLQVAKNVKAF.MESYGRS..PNYAS-t...
F0TA56_METLA/414-446                 .tl--GKIGFGSMVYMFSKIMVY.YASNGRL..PSYVS-m...
F6D649_METPW/600-632                 ..g-AVSFTVAQIGDAASRVKAY.VEANKKL..PAYVTI....
E3GWB3_METFV/548-580                 ..d-GTKIYYKDLVYMAAKILNF.YKDKNRL..PNYVTI....
A3WDF6_9SPHN/597-628                 .kr--VNLTPEEARDLAKRALKF.KQERGRL..PSI---ts..
A0A0E4GCY4_9FIRM/108-139             ..v-AGNIYKTEYLKIANAVKNY.MDSTGKT..PNYVS-....
A5UJP6_METS3/1286-1318               .is--TNINKTEYLDVASRVSQY.IISNGQA..PNYAS-s...
E3GYN2_METFV/104-135                 .iq--GTLSKMEYINIAKRIQSF.VENNSRA..PNY---an..
O26939_METTH/491-523                 ...YTGTLSRTEYRDVARRVYEF.TRRNGRL..PSYVQV....
O26459_METTH/67-99                   ..a-GPSVSRADVEDAAVRVNAF.IARNKRL..PLTVEV....
F6D649_METPW/677-709                 ..k-SGNIKKTEYVSMAKAIKSF.MDSYGKA..PNYAS-s...
O26812_METTH/1613-1645               ...RSPGISVGQIIDAASWVRAY.YERYGRL..PSKVAI....
O26812_METTH/1690-1720               ...RHGRIYRSSYVKVAKNILSF.IDSRGRA..PNY---a...
D3E2B4_METRM/210-242                 ..v-NGTINKTEYVQVAKKTVSF.IEKNHRA..PNWI--as..
F0TC22_METLA/123-152                 ..p----LTLAQMKDGIKRAEKY.YANNGRL..PNTVSY....
E3GZJ4_METFV/121-150                 elk------KTEYLDIAKRLVNF.VEKNKRL..PNYVST....
U6ECM8_9EURY/219-250                 .sq--VKFTLAEIVDAAGRVKSY.VETNRAL..PNYV--q...
Q2NF92_METST/416-448                 ...YSQTFSYNEILKKAYDVNLS.IEKYHKI..PEYVL-f...
O26815_METTH/432-464                 ...ASVKISVRQLTDAASWVRAY.YGRYGRL..PGKVTI....
U6EDU9_9EURY/1-32                    ..m--ESLTLEQYRKMVKKVLEF.KRLNGDL..PDYAV-v...
O26401_METTH/103-135                 ...SSATLTRAEYVDMAGRTYRW.MDSEWKG..PNHVGI....
F0TA69_METLA/130-162                 kin---GLTIAQIKDGISRAEAF.YKKNGRL..PNY---lsf.
F6D7H3_METPW/831-863                 ..t-NGIFNSTEYLNIANRVNSF.MNSNGKA..PNYAT-s...
F0TA56_METLA/381-413                 ..k-AGNIQKSEYLKIANSINSF.INTNNRA..PSYAS-s...
F6D649_METPW/431-463                 ..g-AVSFTVAQIGDAASRVKAY.VEANKKL..PAYVTI....
O26459_METTH/332-364                 ...SKGRISYESLVYSISRVLSF.YSSNKRL..PNTVTV....
O26220_METTH/271-303                 ..f-HGYISRKEYRALAADVNRY.MRKYLKA..PNYIR-f...
E3GWB3_METFV/443-475                 ..n-NPIITVSDILDAAARVKKF.IDTNQRL..PKTIK-l...
F0T9A8_METLA/163-195                 ..s-LGTIKFQNLVYSFSKVLAF.QATNNRL..PNYVSV....
F0T886_METLA/60-92                   ..n-SYGLTTAQIKDGLNRAQTF.YNKNNRL..PNYVSY....
F6D7H3_METPW/1135-1167               ..k-NGNINSTEYLDIANRVNSF.MNSNGKA..PNYAT-s...
F0T7K4_METLA/147-176                 ..p----ISKAQMKDGISRVQSF.YNKNNRL..PNTVSF....
F0T900_METLA/102-133                 tns---NINSTEYLDIAKRVKDF.MDSKGRA..PNYAT-....
O26190_METTH/139-171                 ..a-IGQVRPESLIYANARIINF.YNSTGRL..PNYVTV....
U6ECM8_9EURY/85-116                  .sq--VKFTLAEIVDAAGRVKSY.VETNRTL..PSYV--q...
O26247_METTH/3-35                    .sm--ERLTLEQYREMVSEIIEF.KNLYGSL..PKYAL-v...
F6D649_METPW/508-540                 ..k-SGNIKKTEYVSMAKAIKSF.MDSYGKA..PNYAS-s...
F6D7H3_METPW/910-938                 ..y-----SVDQVNDAASRVKAY.VEVNHRL..PNYVT-m...
O26457_METTH/550-582                 ..s-AGPLSFNVLLYSLSKVVAF.QEDNGRL..PNYVTV....
O26512_METTH/224-256                 ..n-IGKISSDNLVYAVARILKF.QKDNSRL..PNYVTI....
O26459_METTH/299-331                 ..a-RGTLTRLEYLKVASGVQGF.MEKNHRA..PNYA--gs..
Q8P8X7_XANCP/636-667                 rla----ISYEEAKDLAKRAVAF.KNERGRL..PEIG--sa..
O26815_METTH/542-574                 ..g-LGRIPFQRLVYMYSKIIKF.YGTNKRL..PNYVTI....
F0TA78_METLA/95-127                  .kt--TSLSFKNIVAASTSVKNF.INTNKRL..PSYVTI....
O26457_METTH/447-479                 .ae--NSITASMIMDAASRVKAF.VESNYRL..PNYVS-l...
O26459_METTH/167-199                 ..r-DQKIGFESLVWLFARAINF.KVANQRL..PNHIK-l...
O26401_METTH/139-171                 ...GAGDLSPDILLRAFVRVLTE.YRSTGKL..PDRVTV....
Q0BRY6_GRABC/633-663                 .kr--VSLTPEDARDLAKRALQF.KQERGRL..PSI---t...
O26886_METTH/137-169                 ...SGGKIDFYNTVYLLSKIGRY.RYQKGRM..PTYVYI....
O26886_METTH/104-136                 ..i-SLKLSRTQYTEITVRFRDF.TDKYSRC..PSTVSY....
R9SJM8_9EURY/1150-1180               ...--GKVQYENLIEAFSRVLSY.YGSNSQL..PNYVTI....
A0A0E4GB20_9FIRM/67-99               .vl--GTFTIDQIKQAATTVRKY.IETNQKL..PNNVQI....
F0TCV1_METLA/141-171                 .sq----LTLAQMKDGLKRAQTF.YNTNYRL..PNYVSY....
Q2NH69_METST/40-72                   ..d-DVKIYKNEYIEAIENVNKF.ILENGRH..PETITI....
F6D696_METPW/660-692                 ...STVTFTRAQILDASARVKAY.VEANYGL..PNYVTI....
F6D7H3_METPW/1288-1319               ..t-SGDIQYSEYIDIAKDAKKF.MDSNGTA..PNYA--y...
O26457_METTH/517-549                 ...ASGTIQKDEYLQIASQVLSY.MSSTGTA..PSQIS-s...
Q2NG85_METST/311-343                 .ti--HTYTYSQILEAANRVKNF.KDKNKRL..PTWVVI....
F0T7M7_METLA/59-89                   .sg----LTSAQIKDGYTRAQNF.YNTNHRL..PNYVSY....
F0T6C1_METLA/132-162                 .ng----LTVAQLKDGISRVQSF.YSNNGRL..PNYVSY....
E3GWB3_METFV/517-547                 ..i---TLPKDKYVDVASKVIKF.MDTNGKA..PNFA--tv..
Q2NG85_METST/416-449                 ..s-LGTLMLNSTIDGFSRALAYtYNHNGVL..PNYISY....
U6EC32_9EURY/394-425                 .sq--VKFTLAEIVDAAGRVKSY.VETNRAL..PNYV--q...
O26815_METTH/509-539                 ...RHGRLYRSSYVRVAKNILSF.IDSRGRA..PNY---a...
O26179_METTH/139-171                 ..a-IGQVRPESLIYANARIINF.YNSTGRL..PNYVTV....
O26179_METTH/106-138                 ...GTGTLQKAGYLQVAKNVKAF.MESYGRS..PNYAS-t...
F0TC25_METLA/104-136                 ..k-GGTIDKNTYLSMASSVNSY.IAKYGKA..PNYVTT....
D3E3E6_METRM/2-32                    .th----LTITEYREMVKDIIEF.KNENGKM..PD----fasv
O26247_METTH/36-68                   ..d-GKKIHKEHYIDMIERVNKF.VLEMGRN..PRTVDI....
O26886_METTH/33-65                   ...DSETLNSSEVLQASVRVANF.MEKYQRL..PENIS-a...
F0TAI6_METLA/115-145                 .sp----ISLAQMKDGKSRVERF.YAVNHRL..PNYVSF....
U6ECM8_9EURY/162-194                 ..t-SGNLNKAGYIDLASRVKSF.MDSNGAA..PNYGS-t...
#=GC seq_cons                        ..t..splshsphlchus+lhsF.hpsNsRl..PNYVs.....
//
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