GenomeNet

Database: Pfam
Entry: PRTase_3
LinkDB: PRTase_3
Original site: PRTase_3 
#=GF ID   PRTase_3
#=GF AC   PF15610.3
#=GF DE   PRTase ComF-like
#=GF AU   Anantharaman V
#=GF SE   Anantharaman V
#=GF GA   28.70 28.70;
#=GF TC   29.50 28.70;
#=GF NC   27.40 27.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   23044854
#=GF RT   Ter-dependent stress response systems: novel pathways related to
#=GF RT   metal sensing, production of a nucleoside-like metabolite, and
#=GF RT   DNA-processing.
#=GF RA   Anantharaman V, Iyer LM, Aravind L;
#=GF RL   Mol Biosyst. 2012;8:3142-3165.
#=GF DR   INTERPRO; IPR028944;
#=GF CC   This PRTase family is related to the ComF PRTases [1]. These
#=GF CC   genes are found in the smaller biosynthetic operon associated
#=GF CC   with the Ter  stress-response operon and are predicted to be
#=GF CC   involved in the biosynthesis of a ribo-nucleoside involved in
#=GF CC   stress-response [1].
#=GF SQ   21
#=GS M2UAQ6_COCH5/1-63        AC M2UAQ6.1
#=GS R1DYI4_EMIHU/326-572     AC R1DYI4.1
#=GS M2V7D4_COCH5/2-188       AC M2V7D4.1
#=GS E4ZIV8_LEPMJ/2-262       AC E4ZIV8.1
#=GS R1BB91_EMIHU/364-611     AC R1BB91.1
#=GS H1YCE2_9SPHI/1-265       AC H1YCE2.1
#=GS A0A089PPU3_PLUGE/90-357  AC A0A089PPU3.1
#=GS E3RXI2_PYRTT/2-256       AC E3RXI2.1
#=GS E3QYQ0_COLGM/52-331      AC E3QYQ0.1
#=GS C7PNW9_CHIPD/1-265       AC C7PNW9.1
#=GS A0A023X1D7_9ACTN/40-304  AC A0A023X1D7.1
#=GS M2SQF2_COCSN/2-255       AC M2SQF2.1
#=GS A0A077KFB7_9FLAO/1-265   AC A0A077KFB7.1
#=GS H1Z8U3_MYROD/1-264       AC H1Z8U3.1
#=GS A0A0C1G4X2_9FLAO/1-265   AC A0A0C1G4X2.1
#=GS G2Z396_FLABF/1-265       AC G2Z396.1
#=GS R0KEE4_SETT2/2-259       AC R0KEE4.1
#=GS Q0UEK8_PHANO/2-265       AC Q0UEK8.1
#=GS R5HHP5_9SPIR/134-212     AC R5HHP5.1
#=GS B2WKS8_PYRTR/2-256       AC B2WKS8.1
#=GS C6XW67_PEDHD/2-266       AC C6XW67.1
M2UAQ6_COCH5/1-63                   ...................-----------..--------------------------------------------...........-----------------------..-.------------------------..----..----.-----------------.-------...--------------------------------...---------------..---------------MKE..IEAITQGPH..FVMNQCFVKFILER.DNVDFCQFIR..RQDDHFVRLLLDHAIYSNYYN.DKEYT------d.......
R1DYI4_EMIHU/326-572                .awlhvnnfdevkgtaqls-----------..----------LFSRMKYGHTPSIKQWVDVLEQRL----SALAPA...........GARICIAGSSCGLVPNCAN----..L.VVDELVRRTGGRYRRVHVSVSLPK.dQSLR..SLNY.CNLSMAEREAEMATRSVrVLEPEVL..gESDAVLVVDDIISTGLHEQQLREALSKHIDER...RLGFWYFIALSPE-S..DPKTEYALAHALYPDATK.lCCDIAASPDgaHQITKRMLTFLLTG.DLPPDFAHLS..ALPAGFIRRLLDT--------.-----------ldssglr.
M2V7D4_COCH5/2-188                  ...................VQDVFSLHSIVagDELRFPFSLKDYQRYIFGDDRLAHRLGTDLAKAYISTLPSPID-...........DFAVAVLSE---QVPTATHSLRD..H.FAAYLNRHLVANNAAPALKLGFHH..ARPSaeLARA.GPPAST---------IY.HIDTKRL...QKRTLIVLADIRTSQDREDEIRHSFAVQGI--...TTVFAYLAALSDAAS..TVALSNLLSSVISPSM--..---------..--------------.----------..---------------------.-----------........
E4ZIV8_LEPMJ/2-262                  ..................v-PEVCSLYQFAgeGNTPYPFSIQDYQRYVYGDDKRAHQFGTDLAKAFIATRTSNQSFt.........hDIAVAVLSD---SIPTATHGLRR..H.FVAYLNRHLISLNARPVLTIDVFS..V---..GQDA.GVLQDVTKENS--KDLY.HIDVTRL...AGRSLIVLGDIRTAHTREDHMTQSLRNLNLDN...PIVFAYIAAVEGLQH..TAGLTSLMALIVGPTIKD..IETIAQAAN..FTMNQSFVHYLLGR.DYAGFCSFVR..RQDDFFARLLLDYAIAGLYYN.DEDYRQNFDFL........
R1BB91_EMIHU/364-611                .awlhvnnfdevkgtaqls-----------..----------LFSRMKYGHTPSIKQWVDVLEQRL----SALAPA...........GARICIAGSSCGLVPNCAN----..L.VVDELVRRTGGRYRRVHVSVSLPK.dQSLR..SLNY.CNLSMAEREAEMATRSVrVLEPEVL..gESDAVLVVDDIISTGLHEQQLREALSKHIDER...RLGFWYFIALSPE-S..DPKTEYALAHALYPDATK.lCCDIAASPDgaHQITKRMLTFLLTG.DLPPDFAHLS..ALPAGFIRRLLDT--------.-----------ldssglrh
H1YCE2_9SPHI/1-265                  .................ml--ATYSLHHID..NANYFGFNPDDYSRFKFGDEAVAKTYGTSLAEGFIQNCLVRQSI...........EQQIVVISSPFSFIPTATFALKT..W.FVCHLNRWLARHGYQVVQETKVHR..TVTY..KEDY.GELDAEQRISLIGNDLF.HIDKDFL...TNKTLIFLDDIKITGSHERMIMKMVGNYQLDN...DIYMLYFAELVNKAI..HPNIENYLNYHQVKSIFE..LDPIIKSGS..FAINTRIVKYILNY.DFDSFRIFIE..NQTSAFVDLLYDMALGNGYHT.IEAYAKNLNFI........
A0A089PPU3_PLUGE/90-357             ............attlagi-----------..-----------YSRAKYGGVSEIRYLARCVIDYLAAELDDTSSSwsglfcqakeeGESVVMMTTGWRNVPSTANVLYD..I.VVEEINLTLAHKGLPTIINVKLPR..IAPP..CENY.ASLSQAERDRVNLVQDH.VIPAENFyrwSGVHVIFGDDVLVTGATADKVL----YESLCNgarSFRAIYPVALDPRVAltDASVEDRLNSVSVKQHLDenVAQLLSAPG..YQPILRALRLLFGEdNRDSLPAFLP..NVPVLTWLNLYKSALNNEFLA.QPACAPSLVML........
E3RXI2_PYRTT/2-256                  ...................VQNVVSLHNITggDAVKFPFSPPDYQRYVFGDDRLAHRFGRELAKVFIPTICNSRD-...........DFAVAVLSE---KVPTATHSLRD..H.FVAYLNRYLIANHASPALKLDFHNvgSNTK..PRDG.---PPTSKRNA-----Y.HIDTERL...QNRTLIVLADFRTGQAREDLIRSSFGARGV--...TTIFAYLASLDQSTT..TTALTKILSSVISPSMKE..IENISQPPN..FVMNECFVKFVLGT.EYSEFCPFIR..RQDDHFVRLLLDHAINGHYHD.DQEHAHNVQFL........
E3QYQ0_COLGM/52-331                 ...................IKDTLVLYYIE..DEAKPGFNKYDYSRFKYGDTRFASQYGQEMANLAWKQLIKPILDkdras.hrpltRFATMVSQG---SLPTAATTFES..A.FCQYLNRYLAAEGAYAVLSVPILKatSASQ..SGDY.ATMSDADRENLMNNEHF.TFDRQAI...EGMVVLNLDDIYITGGHERAIRRTFQEEAAAGrhhDVYYLYIAKLANPKI..DPAIETRLNEVAVPQFKD..FKSIIEGPM..FIIENRFVKRMLKA.GSAELKGLLSslNQGKDFAGRLYDAAIMNDFHMgGNAYKPNLKLV........
C7PNW9_CHIPD/1-265                  ...................MKDVYALHSIV..DDAHFPFDPAAYSCFKFGDGAVAEAFGTALATGFIATYGDRLSE...........NEQLVVLPSPYTTIPTASYHMTT..A.FVKMLNRYLCMRGYNPADTAKIHR..YKTY..SIDY.GALDMESRKALIINDKY.HLDKEFL...AGKTLIFTDDIRITGSHELIIRNLLKKFGLSN...DAYYLYYAQLQNQDI..HPNIENKLNYYSVHSLQS..LEAVIGSSS..FRFNTRVVKFILNA.PFAEYEKLLM..KQTHGFLQELADCCIGNNYHQ.MEEYRNNANFL........
A0A023X1D7_9ACTN/40-304             ...........irgresev-----------..-------SLDGYSRFKHGDERWARRFGHEVADMLLSRKSALFRSgt.......mrSERVLLASFPYKYVPTAAANMVD..H.TLARINHVLTGSGRPAAGLLHVFKypWQAS..IEHYfPTMSEKERRLMLGNVRL.SVDRSRL...EGAHLVVIDDVRVTGATQDMLLTFLSEVPGLA...SLTVAFLCDVAPEVAreNPAVEFEINHHEVTTLEH..VEAIAKSGE..FRWNVRVAKFVLEErDEAAFDAFVL..TLGDRHLEELYRSATLNEYHF.EEKYRRKM---gvl.....
M2SQF2_COCSN/2-255                  ...................VQDVFSLHSIVadDKLRFPFSLKDYQRYIFGDGRLAHRFGTDLAKAYIPTLPGPID-...........DFAVAVLSD---QVPTATHSLRD..H.FVAYLNRHLVANNATPALKLDFHHagLSAE..LARV.GPPASTI---------Y.HIDTKRL...QNRTLIVLADIRTSQDREDEIRRSFAVQGI--...TTVFAYLAALSDSAT..TVALSNLLSSVISPSMKD..IEAITQRPH..FFMNQCFVKFILER.DNVDFCQFIR..RQDDHFVRLLLDHAIYSNYYN.DEEHTDNIRFL........
A0A077KFB7_9FLAO/1-265              ...................MNKRYSLHHIH..SADEFTFSPAEYSYFKYGDKSYAEKFAKELFDGFISENEELLNT...........DREIVVLPSPYMAIPTASNFLCF..Y.FKKHLDYYLFQKEKKSSILSKINR..NHTY..ITDY.GNLNFEDRKNLIANDTY.YIDKDFL...RGKLCIFIDDIKITGSHEYTVNRILNEYNVEA...DFMFLYYAELMNFDL..DPTIENFFNYYAVKNVKH..IAEVMNKSC..FQFNTRIVKYILGL.DSSNFDYLTS..KVKKGQMDLLLELAISNNYHL.IKEYKNNINTL........
H1Z8U3_MYROD/1-264                  ..................m-INRYSLHQIN..NSEAFTFNPADYSVFKFGNIALAEQFAKELFQGFIAQYSDTVL-...........DEEIYIFPSPYMAIPTASNYLCY..Y.FKLELDRYLYLKQRPSSKLGKIHR..NQTY..TVDY.GNLSFEDRKKLIANDTY.YIDKELL...KDKLCIFLDDIKITGSHEYTVKKILDTYKVEG...TFLFLYYAEVVNLAI..DPKIENFFNYYTISDANA..LVELINSEA..FKFNTRVIKYILNL.DHSSFKNVVT..LLPEPKKQELFDLAISNDYHL.IEEYQSNLNKL........
A0A0C1G4X2_9FLAO/1-265              ..................m-NRNYSLHKIL..EKDNCPFQEKEYSRFKFGDKFYAEKFAKELFDGFVDQYHDLILS...........NQEIVILPSPFLSIPTASNFLCY..Y.FKKQLNSFLFKNNKKASIESKIFR..NQTY..VTDY.GNLDFEERVKLISNDTY.YIDRNFI...DGKLCIFVDDIKITGSHEHTVNKILNQYNVNG...DFIFVYFAELINKEI..HPNIENHYNYYSVKNVED..IANIINSDH..FQYNTRIVKFILSL.SEDEFAYLVN..NISTEKSNDLFHLAISNNYHQ.IIEYKNNINVI........
G2Z396_FLABF/1-265                  ...................MNTRFSLHKII..DKDQYPFDPKAYSWFKFGDKKYAQEFAYDLFQAFISNYKEVLLK...........HDEIVILPSPYLSIPTASNFLCY..Y.FKKELNQFLFHHHKKASLESKIYR..NQTY..VTDY.GNLNFEDRVQLISNDTY.YVDSNFI...KNKLCLFLDDIKITGSHEHTVNKILNQYQVKG...DFIFIYFAELINKEI..HPKIENFYNYYAVQNLHD..IINIINRPT..FQYNTRIVKYILNL.NQDSFQTLIN..AIGENQKKELFHLAISNNYHQ.ITDYKTNIQSI........
R0KEE4_SETT2/2-259                  ...................VRDVFALHAIVagDDMRFPFSLRDYQRYIFGDDRVAHRLGTDLAKAFIPTISSPPL-...........DFAVAVLSE---KVPTATHSLRN..H.FVAYLNRHLIANNAAPALKLDFHHvgASAK..KARG.GPPPATATAAV-----Y.HIDTQRL...QNRTLIVLADIRTGQDREDRIRASFAVQGI--...TTVFAYLAALDDAAA..TPQLSTFLSSVVSPSIKD..IESIAQGPS..FVMNECFVKFILER.DDVEFCQFIR..RQDDHFARLLLDHAINSHYHD.DDEHKGNVRFL........
Q0UEK8_PHANO/2-265                  ...................VCDVFSLHKISggDGVKFPFPVKDYQRYVFGDDKLAHLFGTDLAKAFIARTGAAEDTstgsn.qelttDVVVAVLSD---HVPTATHNLRE..H.FTAYLNRHLVSEKQRPAHKIDLIR..VTAR..--DD.---PHTSRTST-----Y.HVDLACL...GSRALIILGDIRMSTEQEEAISNSFKSKKIEN...TIVFAYLATLDESVN..TSALSSTLSSIVSPSIKD..IDSLAHSRY..FSMTEAFARFVLSR.DYAEFCRFLR..GQDDFLARKLLDYAIGGDHLE.DELYKNNLRFL........
R5HHP5_9SPIR/134-212                .............ynpdli-----------..--------------------------------------------...........-----------------------..-.----------------------MR..IKDT..RPQY.-KLTKAQRAEN-LSNAF.KVDKTKL...QSGTVLLLDDICTTGSTFEEMIKELKQYGIEN...IVCFA----------..------------------..---------..--------------.----------..---------------------.-----------attp....
B2WKS8_PYRTR/2-256                  ...................IQNVVSLHNITggDAVKFPFSPADYQRYVFGDDRLAHRFGRELAKVFIPTICNSRD-...........DFAVAVLSE---KVPTATHSLRD..H.FVAYLNRHLIANNASPALKIDFHHvgSNTK..LRNG.---PSTSKRNA-----Y.HIDTERL...QDRTLIVLADFRTGQAWEDLVRSSFGARGV--...TTIFAYLASLDQSTT..TTALTKFLSSVISPSMKE..IQNISQPPN..FVMNECFVKFILGR.EYSEFCPFIR..RQDDHFVRLLLDHAINGHYHD.DQEHAHNVQFL........
C6XW67_PEDHD/2-266                  ..................i-PYTYSLHKIH..HSNNFGFSADDYSRFKFGDDRVAKKFGKDLADGFIKGFLEDNQI...........SEQIVVISSPYCFIPTATFAMKN..Y.FVYQLNHWLVENGRMVVQEAKVHR..TITY..KDDY.GALSAEDRIKLIGNDSF.HIDKDFL...RDKVLFFLDDIKITGSHEKMILKMVKEYELKN...DIYMLYFAELANHDI..HPNIENHLNYHKVRSVFD..LDEIIKSGN..FCFNTRIVKYILNC.DFNSFSIFLE..RQTEDFIYNLYNLSLGNSYHT.IDCYSGNLNFL........
#=GC seq_cons                       .....................phhuLHpI...st.tasFs.t-YpRahaGDsphA+paup-LtcsaIsphss.h.............s.tlsllss...tlPTAop.Lpp..a.Fst.LNRaLhtptttsslphcla+..spsh..htcY.ushs.ppRtph..sp.a.alDpphL...ps+slIhLDDI+hTGu+Ectlpp.hsphslps...shhFhYhAtLsspsh..ssslpshLs.hhs.shp-..lpsIhpuss..FthNpphVKalLst.-.spFptalp..p.sctahc.LhDhAIsspYat..ppaptNlphl........
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