GenomeNet

Database: Pfam
Entry: PRTase_3
LinkDB: PRTase_3
Original site: PRTase_3 
#=GF ID   PRTase_3
#=GF AC   PF15610.1
#=GF DE   PRTase ComF-like
#=GF AU   Anantharaman V
#=GF SE   Anantharaman V
#=GF GA   110.50 110.50;
#=GF TC   192.20 191.90;
#=GF NC   29.10 28.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF CC   This PRTase family is related to the ComF PRTases [1]. These
#=GF CC   genes are found in the smaller biosynthetic operon associated
#=GF CC   with the Ter	stress response operon and are predicted to  be
#=GF CC   involved in the biosynthesis of a ribo- nucleoside involved in
#=GF CC   stress response [1].
#=GF SQ   23
#=GS Q02UG2_PSEAB/70-363  AC Q02UG2.1
#=GS D7VYC0_9FLAO/1-274   AC D7VYC0.1
#=GS G2UCW5_PSEAI/1-195   AC G2UCW5.1
#=GS E3QYQ0_COLGM/51-337  AC E3QYQ0.1
#=GS H0J8N7_9PSED/69-362  AC H0J8N7.1
#=GS E2N113_CAPSP/1-267   AC E2N113.1
#=GS H3LDB1_KLEOX/73-366  AC H3LDB1.1
#=GS Q1M835_RHIL3/1-236   AC Q1M835.1
#=GS B3G232_PSEAI/73-366  AC B3G232.1
#=GS E3RXI2_PYRTT/1-266   AC E3RXI2.1
#=GS C4UU59_YERRO/48-341  AC C4UU59.1
#=GS C7PNW9_CHIPD/1-279   AC C7PNW9.1
#=GS G0JP06_9GAMM/73-366  AC G0JP06.1
#=GS D7VNC5_9SPHI/1-274   AC D7VNC5.1
#=GS H1Z8U3_9FLAO/1-267   AC H1Z8U3.1
#=GS G2Z396_FLABF/1-267   AC G2Z396.1
#=GS E4ZIV8_LEPMJ/1-272   AC E4ZIV8.1
#=GS Q0UEK8_PHANO/1-275   AC Q0UEK8.1
#=GS A6E879_9SPHI/1-277   AC A6E879.1
#=GS H1YCE2_9SPHI/1-277   AC H1YCE2.1
#=GS H7FT11_9FLAO/1-268   AC H7FT11.1
#=GS B2WKS8_PYRTR/1-266   AC B2WKS8.1
#=GS C6XW67_PEDHD/1-276   AC C6XW67.1
Q02UG2_PSEAB/70-363             ......LTPAESGLFRDMDTG.aDASALAGVYSRAKYGSVGDIQYLARQLIDYLCGEldrpdsqwsclFRNAKACGDNVVMMTTGWRNVPSTANVLYEIVVEEVNVKLAHMALPTIINVKLPRIAPPCE..DYANLSTEERERVNLVQDHVIPAENFyrwSGVHVIFGDDVLVTG.STADKVLYESMRSGAKS..fRAIYPVAIDP.-RVAlgDASVEDRLNSVVVEQRLDdtVAELLSARDYQPILRTLRLLFGEGNREsLAAFLP..KVPAPTWLRLYKSALGNEFL.GQPQCAPSLVLLREYL.TNAG-l.......
D7VYC0_9FLAO/1-274              ......MNT-RYSLHHIHSAD..EFTFSPAEYSYFKYGDKSYAEKFARELFDGFISE...........NEQLLKTDREIVVLPSPYMAIPTASNFLCFYFKKHLDFYLFQQGKKSSVLSKINRNHTYIT..DYGNLNFEDRKNLIANDTYYIDKDFL...RGKLCIFIDDIKITG.SHEYTVNRILDEYKVEA...DFMFLYYAELmNFDL..DPKIENFFNYYAVKNVNH..VAEVMNKESFQFNTRIVKYILGLDSGN.FDYLTS..KVKKEQMDLLLELAISNNYH.LIKEYENNINTLIQT-.-----elyygy..
G2UCW5_PSEAI/1-195              ......---------------..----------------------------------...........----------MVMMTTGWRNVPSTANVLYEIVVEEVNVKLAHLALPTIINVKLPRIAPPCE..DYASLSTEEREHVNLVQDHVIPAENFyrwSGVHVIFGDDVLVTG.STADKVLYESMNNGAKS..fRAIYPVAIDP.-RVAlgDASVEDRLNSVVVEQRLDdtVAELLSARDYQPILRTLRLLFGEGNREsLAAFLP..KVPAPTWLRL----------.----------------.-----ggf.....
E3QYQ0_COLGM/51-337             ......LIKDTLVLYYIEDEA..KPGFNKYDYSRFKYGDTRFASQYGQEMANLAWKQlikp...ildkDRASHRPLTRFATMVS-QGSLPTAATTFESAFCQYLNRYLAAEGAYAVLSVPILKATSASQsgDYATMSDADRENLMNNEHFTFDRQAI...EGMVVLNLDDIYITG.GHERAIRRTFQEEAAAGrhhDVYYLYIAKLaNPKI..DPAIETRLNEVAVPQFKD..FKSIIEGPMFIIENRFVKRMLKAGSAE.LKGLLSslNQGKDFAGRLYDAAIMNDFHmGGNAYKPNLKLVQA--.-----magl....
H0J8N7_9PSED/69-362             ltldga------GRFRDMSSG.aSASELTAIYSRAKYGSPEDIRILADLVIHYLERQlddpashwsglFTSALTHHDNVVLMTTGWRNVPSTANVLYDIVVEEINVKLAHMGLPTLINVKLPRIAPPCE..NYASLSTEERERVNLVQDHVIPAENFyrwSGVHVIFGDDVLVTG.STADKVFRESLIAGARS..fQAIYPIALDPrVALA..DATVEERLNMVEISHHLDdkLADLLVAADYQPILRTLRLLFSANNYQaLPAFLE..QVPAANWMRLYKAALGNEFL.RQTECIPSLTLLRHYL.-----eglgl...
E2N113_CAPSP/1-267              ......MNK-RFSLHSIESAE..ACTFSEAAYSRFKFGDTAVAEQFGKELFAGFIAQ...........HSDFILAQDEIVLLPSPYYAIPTASDYLCHYFKKELNYFLFQHDRKSCVTAKIHRNQTYVQ..DYGNMSYEQRVNLIANDTYYIDRTFI...EGKCCLLIDDIKITG.SHEHTVNRILKQYNVQG...DFFFLYYAELtNKDI..DPKIENHFNYFAIETPTD..LIELMKSERFAFNTRIIKYILLLPEAE.CEKIYK..AITETQRKEIFEWAISNNYH.QIAEYRTNLLKV----.-----ap......
H3LDB1_KLEOX/73-366             ....lt--PSVTGSFCDMRTG.aDATTLAGIYSRAKYGGVSEIRYLARCVIDYLAAElddtssswsglFCQAKEEGESVVMMTTGWRNVPSTANVLYDIVVEEINLTLAHKGLPTIINVKLPRIAPPCE..NYASLSQAERDRVNLVQDHVIPAENFyrwSGVHVIFGDDVLVTG.ATADKVLYESLCNGARS..fRAIYPVALDPrVALT..DASVEDRLNSVSVKQHLDenVAQLLSAPGYQPILRALRLLFGEDNRDsLPAFLP..NVPVLTWLNLYKSALNNEFL.AQPACAPSLVMLRTYL.MQNG-l.......
Q1M835_RHIL3/1-236              ......---------------..----------------------MGHQIADAFFEK...........HASTILNSR-CLMIPSPFNFVPNAANVMTMHLLDRLNNHIVDEKGNHVEYATVPRKISYMD..DYGFLSGEDRKSLIAGDKFYFNSQHF...EGRCLLFIDDVKITG.THQNKLVHLMRKQQLEN...KTFFLYFARY.-TGD..RPNIESELNFAAVKSIKD..LNRIVVEPNHHMTARTIKYILSADPDElYNDFLR..FRSYRYLETLYFNCLNEGYY.KIQKYQANIDIIRN--.-----vanvmke.
B3G232_PSEAI/73-366             ......LTPAGSGLFRDMATG.tDATALAGIYSRAKYGSVGDIQYLARQLIDYLCGEldrsdsqwsclFRNAKACGDNVVMMTTGWRNVPSTANVLYEIVVEEVNVKLAHLALPTIINVKLPRIAPPCE..DYASLSTEEREHVNLVQDHVIPAENFyrwSGVHVIFGDDVLVTG.STADKVLYESMNNGAKS..fRAIYPVAIDP.-RVAlgDASVEDRLNSVVVEQRLDdtVAELLSARDYQPILRTLRLLFGEGNREsLAAFLP..KVPAPTWLRLYKSALGNEFL.GQVQCAPSLVLLRDYL.TDAG-l.......
E3RXI2_PYRTT/1-266              ......MVQNVVSLHNITGGDavKFPFSPPDYQRYVFGDDRLAHRFGRELAKVFIPT...........--ICNSRDDFAVAVLS--EKVPTATHSLRDHFVAYLNRYLIANHASPALKLDFHNVGS---..---NTKPRDGPPTSKRNAYHIDTERL...QNRTLIVLADFR-TGqAREDLIRSSFGARGVTT...IFAYLASLD-.QSTT..TTALTKILSSVISPSMKE..IENISQPPNFVMNECFVKFVLGTEYSE.FCPFIR..RQDDHFVRLLLDHAINGHYH.DDQEHAHNVQFLLWEVeARESM........
C4UU59_YERRO/48-341             ....lt--PNATGSFCDMRTG.aDATTLAGIYSRAKYGGVSEIRYLARCVIDYLAAElddtssswsglFCQAKEEGESVVMMTTGWRNVPSTANVLYDIVVEEINLTLAHKGLPTIINVKLPRIAPPCE..NYASLSQAERDRVNLVQDHVIPAENFyrwSGVHVIFGDDVLVTG.ATADKVLYESLCNGARS..fRAIYPVALDPrVALT..DASVEDRLNSVSVKQHLDenVAQLLSAPGYQPILRALRLLFGEDNRGsLPAFLP..NVPVLTWLNLYKSALNNEFL.AQPACAPSLVMLRTYL.MQNG-l.......
C7PNW9_CHIPD/1-279              .....m--KDVYALHSIVDDA..HFPFDPAAYSCFKFGDGAVAEAFGTALATGFIAT...........YGDRLSENEQLVVLPSPYTTIPTASYHMTTAFVKMLNRYLCMRGYNPADTAKIHRYKTYSI..DYGALDMESRKALIINDKYHLDKEFL...AGKTLIFTDDIRITG.SHELIIRNLLKKFGLSN...DAYYLYYAQLqNQDI..HPNIENKLNYYSVHSLQS..LEAVIGSSSFRFNTRVVKFILNAPFAE.YEKLLM..KQTHGFLQELADCCIGNNYH.QMEEYRNNANFLFDHL.QK---kipswqsi
G0JP06_9GAMM/73-366             ......LTPAESGLFRDMATG.sDATALAGIYSRAKYGGVHDIRYLARQLIDYLCGEldrpdsqwsylFQNAKVCGDNVVMMTTGWRNVPSTANVLYEFVVEEVNVKLAHMALPTIINVKLPRIAPPCE..DYASLSTEERERVNLVQDHVIPAENFyrwSGVHLIFGDDVLVTG.STADKVLYESMRNGAKS..fRAIYPVAIDP.-RVAlgDASVEDRLNSVVVEQRLDdtVAELLSARDYQPILRTLRLLFGEGNREsLAAFLP..KVPAPTWLRLYKAALGNEFL.SQPQCAPSLVLLREYL.TNAG-l.......
D7VNC5_9SPHI/1-274              ......MKK-HYSQHKIRHQE..HCPFDEAAYSRFKFGDTQYAEKFAEELFSGFISQ...........YASIILSQTDIRLLPSPYHSIPTASNYLCAGFKKNLNRFLFENGKNACIETKIHRQQTYTQ..DYGNLDYQQRLSLISNDTYYIDRQFL...NGKCCLFLDDIKITG.SHERTVSKILDQYQVKG...DFIFIYYAELiNKEI..HPNIENHYNYFAVRSVQD..IISVMNRDSFRFNTRIVKYIMTMQQED.LDMLIR..NIPEALRQELSQLAISNNYH.QIKEYQHNIYKLNYRT.PWQS-t.......
H1Z8U3_9FLAO/1-267              ......MIN-RYSLHQINNSE..AFTFNPADYSVFKFGNIALAEQFAKELFQGFIAQ...........YSDTVLDEE-IYIFPSPYMAIPTASNYLCYYFKLELDRYLYLKQRPSSKLGKIHRNQTYTV..DYGNLSFEDRKKLIANDTYYIDKELL...KDKLCIFLDDIKITG.SHEYTVKKILDTYKVEG...TFLFLYYAEVvNLAI..DPKIENFFNYYTISDANA..LVELINSEAFKFNTRVIKYILNLDHSS.FKNVVT..LLPEPKKQELFDLAISNDYH.LIEEYQSNLNKL----.-----yyg.....
G2Z396_FLABF/1-267              ......MNT-RFSLHKIIDKD..QYPFDPKAYSWFKFGDKKYAQEFAYDLFQAFISN...........YKEVLLKHDEIVILPSPYLSIPTASNFLCYYFKKELNQFLFHHHKKASLESKIYRNQTYVT..DYGNLNFEDRVQLISNDTYYVDSNFI...KNKLCLFLDDIKITG.SHEHTVNKILNQYQVKG...DFIFIYFAELiNKEI..HPKIENFYNYYAVQNLHD..IINIINRPTFQYNTRIVKYILNLNQDS.FQTLIN..AIGENQKKELFHLAISNNYH.QITDYKTNIQSI----.-----ii......
E4ZIV8_LEPMJ/1-272              ......MVPEVCSLYQFAGEGntPYPFSIQDYQRYVYGDDKRAHQFGTDLAKAFIAT..........rTSNQSFTHDIAVAVLS--DSIPTATHGLRRHFVAYLNRHLISLNARPVLTIDVFSVGQ---..DAGVL--QDVTKENSKDLYHIDVTRL...AGRSLIVLGDIRTAH.TREDHMTQSLRNLNLDNp.iVFAYIAAVE-.GLQH..TAGLTSLMALIVGPTIKD..IETIAQAANFTMNQSFVHYLLGRDYAG.FCSFVR..RQDDFFARLLLDYAIAGLYY.NDEDYRQNFDFLLWEVeARES-v.......
Q0UEK8_PHANO/1-275              ......MVCDVFSLHKISGGDgvKFPFPVKDYQRYVFGDDKLAHLFGTDLAKAFIARtgaa..edtstGSNQELTTDVVVAVLS--DHVPTATHNLREHFTAYLNRHLVSEKQRPAHKIDLIRVTA---..-------RDDPHTSRTSTYHVDLACL...GSRALIILGDIRMST.EQEEAISNSFKSKKIEN...TIVFAYLATLdESVN..TSALSSTLSSIVSPSIKD..IDSLAHSRYFSMTEAFARFVLSRDYAE.FCRFLR..GQDDFLARKLLDYAIGGDHL.EDELYKNNLRFLKWEIdARESI........
A6E879_9SPHI/1-277              ......MIPYTYSLHKIHDTV..NFGFKADDYSRFKFGDANVARHFGQALADGFIEN...........FLTENMIADQIVVISSPYCFIPTATFAMKDHFVYRLNRWLVDNGGHAVQEAKVHRTITYKE..DYGELSAEARMMLIGNDSFHIDKDFI...AGKTLLFLDDIKITG.SHERMILKMVKEYGLKN...QIHMLYFAELvNGDI..HPNIENHLNYYSVKSIFD..LEEVIKSNHFCINTRIVKYILNCDFES.FSIFIE..RQDDAFINQLYDLSLGNSYH.TIESYRENLNFIKNNI.NTK--kykl....
H1YCE2_9SPHI/1-277              ....ml--A-TYSLHHIDNAN..YFGFNPDDYSRFKFGDEAVAKTYGTSLAEGFIQN...........CLVRQSIEQQIVVISSPFSFIPTATFALKTWFVCHLNRWLARHGYQVVQETKVHRTVTYKE..DYGELDAEQRISLIGNDLFHIDKDFL...TNKTLIFLDDIKITG.SHERMIMKMVGNYQLDN...DIYMLYFAELvNKAI..HPNIENYLNYHQVKSIFE..LDPIIKSGSFAINTRIVKYILNYDFDS.FRIFIE..NQTSAFVDLLYDMALGNGYH.TIEAYAKNLNFISSNL.-----linthkli
H7FT11_9FLAO/1-268              ......MNK-SYSLHKIIEEE..KYPFPAEEYSWFKFGDKYYAEKFAIELFNGFVNE...........YRELLLSDKEIIILPSPYLSIPTASNFLCYYFKKQLNSFLFKNNKKACIESKIYRNQTYVT..DYGNLDFEERVKLISNDTYYIDRNFI...DGKLCIFVDDIKITG.SHEHTVNKILNQYSING...DFVFVYYAELaNKEI..HPKIENHYNYYAVKDVDD..IIKIINGKHFQYNTRIVKFILSLDKKK.FSYLIN..NISNEKCNELFHLAISNNYH.QIIDYQNNLVSIK---.-----id......
B2WKS8_PYRTR/1-266              ......MIQNVVSLHNITGGDavKFPFSPADYQRYVFGDDRLAHRFGRELAKVFIPT...........--ICNSRDDFAVAVLS--EKVPTATHSLRDHFVAYLNRHLIANNASPALKIDFHHVGS---..---NTKLRNGPSTSKRNAYHIDTERL...QDRTLIVLADFR-TGqAWEDLVRSSFGARGVTT...IFAYLASLD-.QSTT..TTALTKFLSSVISPSMKE..IQNISQPPNFVMNECFVKFILGREYSE.FCPFIR..RQDDHFVRLLLDHAINGHYH.DDQEHAHNVQFLLWEVeARESM........
C6XW67_PEDHD/1-276              ......MIPYTYSLHKIHHSN..NFGFSADDYSRFKFGDDRVAKKFGKDLADGFIKG...........FLEDNQISEQIVVISSPYCFIPTATFAMKNYFVYQLNHWLVENGRMVVQEAKVHRTITYKD..DYGALSAEDRIKLIGNDSFHIDKDFL...RDKVLFFLDDIKITG.SHEKMILKMVKEYELKN...DIYMLYFAELaNHDI..HPNIENHLNYHKVRSVFD..LDEIIKSGNFCFNTRIVKYILNCDFNS.FSIFLE..RQTEDFIYNLYNLSLGNSYH.TIDCYSGNLNFLKNYI.NNK--nyk.....
#=GC seq_cons                   ......h...thuLapIhsss..phsFssssYSRaKaGDsphActaucpLhcsFlsp...........apsthhps-plVhlsSsapslPTAossLppaFVccLNpaLscput.sslpsKlhRhto.sp..DYusLshE-R.pl.tsssaaIDp-hl...sG+plIFlDDl+lTG.S+EcpVhp.htphslcu...chhalhhs-..spsh..csslEs+LN.hsVcshhD..ltpllsussFphspRhlKalLutsppc.hssFlp..phssshhppLachAluNpYa.p.ppYtsNLshLp..l......h.......
//
DBGET integrated database retrieval system