GenomeNet

Database: Pfam
Entry: PerB
LinkDB: PerB
Original site: PerB 
#=GF ID   PerB
#=GF AC   PF06590.6
#=GF DE   PerB protein
#=GF AU   Moxon SJ
#=GF SE   Pfam-B_19494 (release 10.0)
#=GF GA   25.00 25.00;
#=GF TC   127.20 127.10;
#=GF NC   21.90 19.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   7729884
#=GF RT   A plasmid-encoded regulatory region activates chromosomal eaeA
#=GF RT   expression in enteropathogenic Escherichia coli. 
#=GF RA   Gomez-Duarte OG, Kaper JB; 
#=GF RL   Infect Immun 1995;63:1767-1776.
#=GF RN   [2]
#=GF RM   8885267
#=GF RT   Cloning and characterization of bfpTVW, genes required for the
#=GF RT   transcriptional activation of bfpA in enteropathogenic
#=GF RT   Escherichia coli. 
#=GF RA   Tobe T, Schoolnik GK, Sohel I, Bustamante VH, Puente JL; 
#=GF RL   Mol Microbiol 1996;21:963-975.
#=GF DR   INTERPRO; IPR009513;
#=GF CC   This family consists of several PerB or BfpV proteins found
#=GF CC   specifically in Escherichia coli. PerB is thought to play a role
#=GF CC   in regulating the expression of BfpA [1].
#=GF SQ   14
#=GS A2T8L9_ECOLX/1-68   AC A2T8L9.1
#=GS A2T8S8_ECOLX/1-68   AC A2T8S8.1
#=GS A2T8S2_ECOLX/1-68   AC A2T8S2.1
#=GS A2T8P6_ECOLX/1-68   AC A2T8P6.1
#=GS Q9F875_ECOLX/1-129  AC Q9F875.1
#=GS PERB_ECO11/1-129    AC P0C961.1
#=GS A2T8Q0_ECOLX/1-68   AC A2T8Q0.1
#=GS Q9EUG4_ECOLX/1-129  AC Q9EUG4.1
#=GS A2T8R4_ECOLX/1-66   AC A2T8R4.1
#=GS B3WRX5_ECOLX/1-129  AC B3WRX5.1
#=GS Q7DJS4_ECOLX/1-129  AC Q7DJS4.1
#=GS Q9ETR8_ECOLX/1-129  AC Q9ETR8.1
#=GS PERB_ECO27/1-129    AC B7UTE8.1
#=GS Q9APE5_ECOLX/1-129  AC Q9APE5.1
A2T8L9_ECOLX/1-68              MKNNLREEKEVVFDGCMNVLSLPSGWKAITPKKNNATSEIIVLFIPPKASYHIILKYNKTKHCELFFS-------------------------------------------------------------...
A2T8S8_ECOLX/1-68              MKNNLREEKEVVIDGCINVLSLPSEWKAITPKKNNVTSEIIVFFIPPKASYHIILKYDNTKHCELFFS-------------------------------------------------------------...
A2T8S2_ECOLX/1-68              MKNNLREEKEVVFDGCMNVLLLPSGWKAITPKKNNTTSEIIVLFIPPKASYHIILKYNKTKHCELFFS-------------------------------------------------------------...
A2T8P6_ECOLX/1-68              MKNNLREEKEVVFDGCMNVLSLPSGWKAITPKKNNATSEIIVLSIPPKASYHIILKYNKTKHCELFFS-------------------------------------------------------------...
Q9F875_ECOLX/1-129             MKNNLREEKEVVIDGCINVLSLPSEWKAITPKKNNVTSEIIVFFIPPKASYHIILKYDNTKHCELFFSDHITGEQDIIYSQSAFFSHVINHIIALVDVLNKKSYASNVIKFLITMEGGGDILSESKRAP...
PERB_ECO11/1-129               MKNNLREEKEVVFDGCMNVLSLPSGWKAITPKKNNATSEIIVLFIPPKASYHIILKYNKTKHCELFFSDHITGEQDIIYSQNAFFSHVINHTIALVDVLNKKSYASNVIKFLITMEGGGDILSESKRAP...
A2T8Q0_ECOLX/1-68              MKNNLREEKEVVFDGCMNVLSLPSGWKAITPKKNNATSEIIVFFIPPKASYHIILKYNKTKHCELFFS-------------------------------------------------------------...
Q9EUG4_ECOLX/1-129             MKNNLREEKEVVIDGCINVLSLPSEWKAITPKKNNVTSEIIVFFIPPKASYHIILKYDNTKHCELFFSDHITGEQDVIYSQSAFFSHVINHIIALVDVLNKKSYASNVIKFLITMEGGGDILSESKRAP...
A2T8R4_ECOLX/1-66              MKNNLREEKEVVFDGCMNVLSLPSGWKAITPKKNNTTSEIIVLFIPPKASYHIILKYNKTLQI------------------------------------------------------------------vff
B3WRX5_ECOLX/1-129             MKNNLREEKEVVFDGCMNVLSLPSGWKAITPKKNNATSEIIVLFIPPKASYHIILKYNKTKHCELFFSDHITGEQDIIYSQNAFFSHVINHTIALVDVLNKKSYASNVIKFLITMEGGGDILSESKRAP...
Q7DJS4_ECOLX/1-129             MKNNLREEKEVVFDGCMNVLSLPSGWKAITPKKNNATSEIIVLFIPPKASYHIILKYNKTKHCELFFSDHITGEQDIIYSQNAFFSHVINHTIALVDVLNKKSYASNVIKFLITMEGGGDILSESKRAP...
Q9ETR8_ECOLX/1-129             MKNNLREEKEVVFDGCMNVLSLPSGWKAITPKKNNATSEIIVFFIPPKASYHIILKYNKTKHCELFFSDHITGEQDIIYSQNAFFSHVINHIIALVDVLNKKSYASNVIKFLITMEGGGDILSESKRAP...
PERB_ECO27/1-129               MKNNLREEKEVVFDGCMNVLSLPSGWKAITPKKNNATSEIIVLFIPPKASYHIILKYNKTKHCELFFSDHITGEQDIIYSQNAFFSHVINHTIALVDVLNKKSYASNVIKFLITMEGGGDILSESKRAP...
Q9APE5_ECOLX/1-129             MKNNLREEKEVVFDGCMNVLSLPSGWKAITPKKNNTTSEIIVLFIPPKASYHIILKYNKTKHCKLFFSDHITGEQDIIYSQSAFFSHVINHIIALVDVLNKKSYASNVIKFLITMEGGGDILSESKRAP...
#=GC seq_cons                  MKNNLREEKEVVFDGCMNVLSLPSGWKAITPKKNNsTSEIIVLFIPPKASYHIILKYNKTKHCELFFS................................................................
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