GenomeNet

Database: Pfam
Entry: Phage_Treg
LinkDB: Phage_Treg
Original site: Phage_Treg 
#=GF ID   Phage_Treg
#=GF AC   PF04761.7
#=GF DE   Lactococcus bacteriophage putative transcription regulator
#=GF AU   Mifsud W
#=GF SE   Pfam-B_3898 (release 7.5)
#=GF GA   25.00 25.00;
#=GF TC   54.90 54.80;
#=GF NC   21.90 16.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   11337471
#=GF RT   The complete genome sequence of the lactic acid bacterium
#=GF RT   Lactococcus lactis ssp. lactis IL1403. 
#=GF RA   Bolotin A, Wincker P, Mauger S, Jaillon O, Malarme K,
#=GF RA   Weissenbach J, Ehrlich SD, Sorokin A; 
#=GF RL   Genome Res 2001;11:731-753.
#=GF DR   INTERPRO; IPR006848;
#=GF CC   This family represents a number of putative transcription
#=GF CC   repressor proteins found in several Lactococcus bacteriophages.
#=GF CC   Horizontal transfer may account for the presence of similar
#=GF CC   proteins in Lactococcus [1].
#=GF SQ   33
#=GS Q38328_9CAUD/1-60  AC Q38328.1
#=GS A5GZ44_9CAUD/1-58  AC A5GZ44.1
#=GS Q9AZQ7_9CAUD/1-56  AC Q9AZQ7.1
#=GS A5GZ11_9CAUD/1-57  AC A5GZ11.1
#=GS Q8LTC9_9CAUD/1-57  AC Q8LTC9.1
#=GS B5SP05_9CAUD/1-44  AC B5SP05.1
#=GS Q9CIB9_LACLA/1-57  AC Q9CIB9.1
#=GS G8P673_LACLC/1-43  AC G8P673.1
#=GS D2BQB6_LACLK/1-58  AC D2BQB6.1
#=GS Q9MC35_9CAUD/5-61  AC Q9MC35.1
#=GS G8P8D2_LACLC/1-57  AC G8P8D2.1
#=GS Q02WQ7_LACLS/1-56  AC Q02WQ7.1
#=GS Q9MCG4_9CAUD/1-57  AC Q9MCG4.1
#=GS Q77NG6_9CAUD/5-61  AC Q77NG6.1
#=GS D8KHC3_LACLN/1-58  AC D8KHC3.1
#=GS A2RJF1_LACLM/1-58  AC A2RJF1.1
#=GS Q38094_BPR1T/1-58  AC Q38094.1
#=GS Q9AZD1_9CAUD/1-60  AC Q9AZD1.1
#=GS G6FAJ4_LACLC/1-56  AC G6FAJ4.1
#=GS Q9AZQ1_9CAUD/1-57  AC Q9AZQ1.1
#=GS Q9KJ61_9LACT/5-61  AC Q9KJ61.1
#=GS A5GYW4_9CAUD/1-57  AC A5GYW4.1
#=GS F2HP35_LACLV/1-56  AC F2HP35.1
#=GS D3LCD5_OENOE/1-54  AC D3LCD5.1
#=GS A5GYJ0_9CAUD/1-57  AC A5GYJ0.1
#=GS O48507_9CAUD/1-58  AC O48507.1
#=GS Q9T1Y4_9CAUD/1-56  AC Q9T1Y4.1
#=GS Q8LTN7_9CAUD/1-58  AC Q8LTN7.1
#=GS F2HMI2_LACLV/1-58  AC F2HMI2.1
#=GS A5GYR0_9CAUD/1-57  AC A5GYR0.1
#=GS G6FBY7_LACLC/1-58  AC G6FBY7.1
#=GS Q9MBY0_9CAUD/5-61  AC Q9MBY0.1
#=GS Q9CIC5_LACLA/1-60  AC Q9CIC5.1
Q38328_9CAUD/1-60             mevlM--EQVVTHYGETIQEHSVEWYKKQLLKDfSVQFIKDSLLPQLFEWSNAYKAAVELT-n.........
A5GZ44_9CAUD/1-58             .mkn--QVKTINHLGQVVYQESVEFYKEKLSVY.SKDFLQNSLIPQLYEWSNAYKAAVELTK..........
Q9AZQ7_9CAUD/1-56             ....M--EQVVTHYGEAIQQHSVEWYKKQLLKDlSVQFIKDSLLPQLFEWSNAYKAAVELTK..........
A5GZ11_9CAUD/1-57             ....MEQVKTINHLGQVVYQESVEFYKEKLSVC.SKDFLQNALIPQLYEWSNAYKAAVELTK..........
Q8LTC9_9CAUD/1-57             ..mk-NQEKTINHLGQIVYQESVEFYKEKLSVY.SKDFLH-SLIPQLYEWSNAYKAAVELTK..........
B5SP05_9CAUD/1-44             ....MEQEKTINHLGQVVYQESVEFYKEKLSVC.SKDFLQNSLISQLYE-------------..........
Q9CIB9_LACLA/1-57             ....MEQEKTINHLGQVVYQESVEFYKEKLSVH.SKDFLQNSLIPQLYEWSNAYKAAVELTK..........
G8P673_LACLC/1-43             ....M--EQVVTHYRETIQQHSVEWYKKQLLKDfSVQFM-----------------------vllqsfpknl
D2BQB6_LACLK/1-58             .mkn--QVKTINHLGQVVYQESVEFYKEKLSVY.SKDFLQNSLIPQLYEWSNAYKAAIELTK..........
Q9MC35_9CAUD/5-61             ....MEQVKTINHLGQVVYQESVEFYKEKLSVC.SKDFLQNALIPQLYEWSNAYKAAVELTK..........
G8P8D2_LACLC/1-57             ....MEQVKTINHLGQVVYQESVEFYKEKLSVY.SKDFLQNSLIPQLYEWSNAYKAAVELTK..........
Q02WQ7_LACLS/1-56             ....M--EQVVTHYRETIQQHSVEWYKKQLLKDfSVQFIKDSLLPQLFEWSNAYKAAVELTK..........
Q9MCG4_9CAUD/1-57             ....MEQEKTINHLGQIVYQESVEFYKEKLSVY.SKDFLQNSLIPQLYEWSNAYKAAIELTK..........
Q77NG6_9CAUD/5-61             ....MEQEKTINHLGQIVYQESVEFYKEKLSVY.SKDFLQNSLIPQLYEWSNAYKAAIELTK..........
D8KHC3_LACLN/1-58             ..mk-NQEKTINHLGQVVYQESVEFYKEKLSVY.SKDFLQNSLIPQLYEWSNAYKAAIELTK..........
A2RJF1_LACLM/1-58             ..mk-NQEKTINHLGQVVYQESVEFYKEKLSVY.SKDFLQNSLIPQLYEWSNAYKAAIELTK..........
Q38094_BPR1T/1-58             ..mk-NQEKTINHLGQIVYQESVEFYKEKLSVH.SKDFLQNALIPQLYEWSNAYKAAVELTK..........
Q9AZD1_9CAUD/1-60             mevlM--EQVVTHYGETIQQHSVEWYKKQLLKDfSVQFIKDSLLPQLFEWSNAYKAAVELT-n.........
G6FAJ4_LACLC/1-56             ....M--EQVVTHYGETIQQHSVEWYKKQLLKDfSVQFIKDSLLPQLFEWSNAYKAAVELTK..........
Q9AZQ1_9CAUD/1-57             ....MEQEKTINHLGQVVYQESVEFYKEKLSVH.SKDFLQNSLIPQLYEWSNAYKAAVELTK..........
Q9KJ61_9LACT/5-61             ....MEQEKTINHLGQIVYQESVEFYKEKLSVY.SKDFLQNSLIPQLYEWSNAYKAAIELTK..........
A5GYW4_9CAUD/1-57             ....MEQVKTINHLGQVVYQESVEFYKEKLSVC.SKDFLQNALIPQLYEWSNAYKAAVELTK..........
F2HP35_LACLV/1-56             ....M--EKVVTHYRETIQQHSVEWYKKQLLKDfSVQFIKDSLLPQLFEWSNAYKAAVELTK..........
D3LCD5_OENOE/1-54             ..mk-NQEKTINHLGQVVYQESVEFYKEKLSVY.SKDFLKNSLIPQLYEWSNAYKA------vg........
A5GYJ0_9CAUD/1-57             ....MEQEKTINHLGQIVYQESVEFYKEKLSVY.SKDFLQNSLIPQLYEWSNAYKAAIELTK..........
O48507_9CAUD/1-58             ..mk-NQEKTINHLGQIVYQESVEFYKEKLSVY.SKDFLQNSLIPQLYEWSNAYKAAIELTK..........
Q9T1Y4_9CAUD/1-56             ....M--EKVVTHYGETIQQHSVEWYKKQLLKDfSIQFIKDSLLPQLYEWSNAYKAAVELTK..........
Q8LTN7_9CAUD/1-58             ..mk-NQEKTINHLGQVVYQESVEFYKEKLSVY.SKDFLKNSLIPQLYEWSNAYKAAVELTK..........
F2HMI2_LACLV/1-58             .mkn--QVKTINHLGQVVYQESVEFYKEKLSVH.SKDFLQNALIPQLYEWSNAYKAAVELAK..........
A5GYR0_9CAUD/1-57             ....MEQEKTINHLGQIVYQESVEFYKEKLSVY.SKDFLQNSLIPQLYEWSNAYKAAIELTK..........
G6FBY7_LACLC/1-58             ..mk-NQEKTINHLGQVVYQESVEFYKEKLSVY.SKDFLQNALIPQLYEWSNAYKAAVELTK..........
Q9MBY0_9CAUD/5-61             ....MEQEKTINHLGQIVYQESVEFYKEKLSVY.SKDFLQNSLIPQLYEWSNAYKAAIELTK..........
Q9CIC5_LACLA/1-60             mevlM--EQVVTHYGEAIQQHSVEWYKKQLLKDlSVQFIKDSLLPQLFEWSNAYKAAVELTK..........
#=GC seq_cons                 ....MpQEKTINHLGQlVYQESVEFYKEKLSVa.SKDFLQNSLIPQLYEWSNAYKAAVELTK..........
//
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