GenomeNet

Database: Pfam
Entry: Phage_Treg
LinkDB: Phage_Treg
Original site: Phage_Treg 
#=GF ID   Phage_Treg
#=GF AC   PF04761.8
#=GF DE   Lactococcus bacteriophage putative transcription regulator
#=GF AU   Mifsud W
#=GF SE   Pfam-B_3898 (release 7.5)
#=GF GA   25.00 25.00;
#=GF TC   39.10 38.90;
#=GF NC   23.40 21.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   11337471
#=GF RT   The complete genome sequence of the lactic acid bacterium
#=GF RT   Lactococcus lactis ssp. lactis IL1403. 
#=GF RA   Bolotin A, Wincker P, Mauger S, Jaillon O, Malarme K,
#=GF RA   Weissenbach J, Ehrlich SD, Sorokin A; 
#=GF RL   Genome Res 2001;11:731-753.
#=GF DR   INTERPRO; IPR006848;
#=GF CC   This family represents a number of putative transcription
#=GF CC   repressor proteins found in several Lactococcus bacteriophages.
#=GF CC   Horizontal transfer may account for the presence of similar
#=GF CC   proteins in Lactococcus [1].
#=GF SQ   56
#=GS A5GZ44_9CAUD/1-58      AC A5GZ44.1
#=GS Q9CIC5_LACLA/5-60      AC Q9CIC5.1
#=GS U5PN34_LACLL/1-58      AC U5PN34.1
#=GS K2NTM7_9LACT/1-56      AC K2NTM7.1
#=GS Q9AZQ7_9CAUD/1-56      AC Q9AZQ7.1
#=GS Q38328_9CAUD/5-60      AC Q38328.1
#=GS A5GZ11_9CAUD/1-57      AC A5GZ11.1
#=GS Q8LTC9_9CAUD/1-57      AC Q8LTC9.1
#=GS B5SP05_9CAUD/1-44      AC B5SP05.1
#=GS Q9CIB9_LACLA/1-57      AC Q9CIB9.1
#=GS D2BQB6_LACLK/1-58      AC D2BQB6.1
#=GS T0S6M2_LACLC/1-56      AC T0S6M2.1
#=GS Q9MC35_9CAUD/5-61      AC Q9MC35.1
#=GS G8P8D2_LACLC/1-57      AC G8P8D2.1
#=GS T0UR43_LACLL/1-56      AC T0UR43.1
#=GS Y1QE66_LACLC/1-56      AC Y1QE66.1
#=GS Q02WQ7_LACLS/1-56      AC Q02WQ7.1
#=GS Q9MCG4_9CAUD/1-57      AC Q9MCG4.1
#=GS U6EKZ1_LACLL/1-56      AC U6EKZ1.1
#=GS K2PT71_9LACT/1-56      AC K2PT71.1
#=GS A2RJF1_LACLM/1-58      AC A2RJF1.1
#=GS V2XF56_LACLL/1-56      AC V2XF56.1
#=GS D8KHC3_LACLN/1-58      AC D8KHC3.1
#=GS V2WCP1_LACLL/1-58      AC V2WCP1.1
#=GS Q77NG6_9CAUD/5-61      AC Q77NG6.1
#=GS T0W3P9_LACLL/1-57      AC T0W3P9.1
#=GS Q38094_BPR1T/1-58      AC Q38094.1
#=GS G6FAJ4_LACLL/1-56      AC G6FAJ4.1
#=GS T0WLH0_LACLL/1-56      AC T0WLH0.1
#=GS A5GYW4_9CAUD/1-57      AC A5GYW4.1
#=GS Q9AZQ1_9CAUD/1-57      AC Q9AZQ1.1
#=GS Q9KJ61_9LACT/5-61      AC Q9KJ61.1
#=GS T0USH4_LACLC/1-56      AC T0USH4.1
#=GS F2HP35_LACLV/1-56      AC F2HP35.1
#=GS D3LCD5_OENOE/1-54      AC D3LCD5.1
#=GS T0TLN3_LACLC/5-60      AC T0TLN3.1
#=GS U6ENR7_LACLL/1-56      AC U6ENR7.1
#=GS A5GYJ0_9CAUD/1-57      AC A5GYJ0.1
#=GS O48507_9CAUD/1-58      AC O48507.1
#=GS Q9AZD1_9CAUD/5-60      AC Q9AZD1.1
#=GS Q9T1Y4_9CAUD/1-56      AC Q9T1Y4.1
#=GS T0VVB0_LACLC/5-60      AC T0VVB0.1
#=GS G8P673_LACLC/1-44      AC G8P673.1
#=GS Q8LTN7_9CAUD/1-58      AC Q8LTN7.1
#=GS Y1QCC5_LACLC/1-58      AC Y1QCC5.1
#=GS A5GYR0_9CAUD/1-57      AC A5GYR0.1
#=GS F2HMI2_LACLV/1-58      AC F2HMI2.1
#=GS G6FBY7_LACLL/1-58      AC G6FBY7.1
#=GS T0TM07_LACLC/1-56      AC T0TM07.1
#=GS A0A059NT92_9CAUD/1-58  AC A0A059NT92.1
#=GS Q9MBY0_9CAUD/5-61      AC Q9MBY0.1
#=GS T0VC30_LACLL/1-57      AC T0VC30.1
#=GS U6EL65_LACLL/1-58      AC U6EL65.1
#=GS V2WCD6_LACLL/1-57      AC V2WCD6.1
#=GS U5PMN2_LACLL/5-61      AC U5PMN2.1
#=GS T0TRS6_LACLC/5-61      AC T0TRS6.1
A5GZ44_9CAUD/1-58                 ...mk-NQVKTINHLGQVVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAVELTK............
Q9CIC5_LACLA/5-60                 .....MEQ--VVTHYGEAIQQHSVEWYKKQllkdLSVQ---FIKDSLLPQLFEWSNAYKAAVELTK............
U5PN34_LACLL/1-58                 ...mk-NQEKTINHLGQVVYQESVEFYKEK....FSGYSKDFLQNSLIPQLYEWSNAYKAAVELTK............
K2NTM7_9LACT/1-56                 mekvy------IDNVGN-VKMHSVAYYKNL...fGKVWPIDELENILLPQLKEWSNMYKAAKEL--in..........
Q9AZQ7_9CAUD/1-56                 .....MEQ--VVTHYGEAIQQHSVEWYKKQllkdLSVQ---FIKDSLLPQLFEWSNAYKAAVELTK............
Q38328_9CAUD/5-60                 .....MEQ--VVTHYGETIQEHSVEWYKKQllkdFSVQ---FIKDSLLPQLFEWSNAYKAAVELT-n...........
A5GZ11_9CAUD/1-57                 .....MEQVKTINHLGQVVYQESVEFYKEK....LSVCSKDFLQNALIPQLYEWSNAYKAAVELTK............
Q8LTC9_9CAUD/1-57                 ...mk-NQEKTINHLGQIVYQESVEFYKEK....LSVYSKDFLH-SLIPQLYEWSNAYKAAVELTK............
B5SP05_9CAUD/1-44                 .....MEQEKTINHLGQVVYQESVEFYKEK....LSVCSKDFLQNSLISQLYE-------------............
Q9CIB9_LACLA/1-57                 .....MEQEKTINHLGQVVYQESVEFYKEK....LSVHSKDFLQNSLIPQLYEWSNAYKAAVELTK............
D2BQB6_LACLK/1-58                 ...mk-NQVKTINHLGQVVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAIELTK............
T0S6M2_LACLC/1-56                 .....MEQ--VVTHYRETIQQHSVEWYKKQllkdFSVQ---FIKDSLLPQLFKWSNAYKAAVELTK............
Q9MC35_9CAUD/5-61                 .....MEQVKTINHLGQVVYQESVEFYKEK....LSVCSKDFLQNALIPQLYEWSNAYKAAVELTK............
G8P8D2_LACLC/1-57                 .....MEQVKTINHLGQVVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAVELTK............
T0UR43_LACLL/1-56                 .....MEQ--VVTHYGEAIQQHSVEWYKKQllkdLSVQ---FIKDSLLPQLFEWSNAYKAAVELTK............
Y1QE66_LACLC/1-56                 .....MEQ--VVTHYRETIQQHSVEWYKKQllkdFSVQ---FIKDSLLPQLFKWSNAYKAAVELTK............
Q02WQ7_LACLS/1-56                 .....MEQ--VVTHYRETIQQHSVEWYKKQllkdFSVQ---FIKDSLLPQLFEWSNAYKAAVELTK............
Q9MCG4_9CAUD/1-57                 .....MEQEKTINHLGQIVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAIELTK............
U6EKZ1_LACLL/1-56                 ....m---EKVVTHYGETIQQHSIEWYKKQllkdFSVQ---FIKDYLLPQLYEWSNAYKAAVELTK............
K2PT71_9LACT/1-56                 ...me--K-IYIKNVGE-VKMHSVAYYKSL...fEKVWPIDELENILLPQLKEWSNMHKAAKEL--ie..........
A2RJF1_LACLM/1-58                 ...mk-NQEKTINHLGQVVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAIELTK............
V2XF56_LACLL/1-56                 .....MEQ--VVTHYGEAIQQHSVEWYKKQllkdLSVQ---FIKDSLLPQLFEWSNAYKAAVELTK............
D8KHC3_LACLN/1-58                 ...mk-NQEKTINHLGQVVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAIELTK............
V2WCP1_LACLL/1-58                 ...mk-NQEKTINHLGQVVYQESVEFYKEK....LSVHSKDFLQNALIPQLYEWSNAYKAAVELTK............
Q77NG6_9CAUD/5-61                 .....MEQEKTINHLGQIVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAIELTK............
T0W3P9_LACLL/1-57                 .....MEQEKTINHLGQVVYQESVEFYKEK....LSVHSKDFLQNSLIPQLYEWSNAYKAAVELTK............
Q38094_BPR1T/1-58                 ...mk-NQEKTINHLGQIVYQESVEFYKEK....LSVHSKDFLQNALIPQLYEWSNAYKAAVELTK............
G6FAJ4_LACLL/1-56                 .....MEQ--VVTHYGETIQQHSVEWYKKQllkdFSVQ---FIKDSLLPQLFEWSNAYKAAVELTK............
T0WLH0_LACLL/1-56                 .....MEQ--VVTHYGEAIQQHSVEWYKKQllkdLSVQ---FIKDSLLPQLFEWSNAYKAAVELTK............
A5GYW4_9CAUD/1-57                 .....MEQVKTINHLGQVVYQESVEFYKEK....LSVCSKDFLQNALIPQLYEWSNAYKAAVELTK............
Q9AZQ1_9CAUD/1-57                 .....MEQEKTINHLGQVVYQESVEFYKEK....LSVHSKDFLQNSLIPQLYEWSNAYKAAVELTK............
Q9KJ61_9LACT/5-61                 .....MEQEKTINHLGQIVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAIELTK............
T0USH4_LACLC/1-56                 .....MEQ--VVTHYRETIQQHSVEWYKKQllkdFSVQ---FIKDSLLPQLFKWSNAYKAAVELTK............
F2HP35_LACLV/1-56                 ....m---EKVVTHYRETIQQHSVEWYKKQllkdFSVQ---FIKDSLLPQLFEWSNAYKAAVELTK............
D3LCD5_OENOE/1-54                 ...mk-NQEKTINHLGQVVYQESVEFYKEK....LSVYSKDFLKNSLIPQLYEWSNAYKA------vg..........
T0TLN3_LACLC/5-60                 .....MEQ--VVTHYGETIQQHSVEWYKKQllkdFSVQ---FIKDSLLPQLFEWSNAYKAAVELT-n...........
U6ENR7_LACLL/1-56                 ....m---EKVVTHYGETIQQHSVEWYKKQllkdFSVQ---FIKDSLLPQLFEWSNAYKAAVELTK............
A5GYJ0_9CAUD/1-57                 .....MEQEKTINHLGQIVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAIELTK............
O48507_9CAUD/1-58                 ...mk-NQEKTINHLGQIVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAIELTK............
Q9AZD1_9CAUD/5-60                 .....MEQ--VVTHYGETIQQHSVEWYKKQllkdFSVQ---FIKDSLLPQLFEWSNAYKAAVELT-n...........
Q9T1Y4_9CAUD/1-56                 ....m---EKVVTHYGETIQQHSVEWYKKQllkdFSIQ---FIKDSLLPQLYEWSNAYKAAVELTK............
T0VVB0_LACLC/5-60                 .....MEQ--VVTHYGETIQQHSVEWYKKQllkdFSVQ---FIKDSLLPQLFEWSNAYKAAVELT-n...........
G8P673_LACLC/1-44                 .....MEQ--VVTHYRETIQQHSVEWYKKQllkdFSVQF---------------------------mvllqsfpknlf
Q8LTN7_9CAUD/1-58                 ...mk-NQEKTINHLGQVVYQESVEFYKEK....LSVYSKDFLKNSLIPQLYEWSNAYKAAVELTK............
Y1QCC5_LACLC/1-58                 ...mk-NQEKTINHLGQVVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAVELTK............
A5GYR0_9CAUD/1-57                 .....MEQEKTINHLGQIVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAIELTK............
F2HMI2_LACLV/1-58                 ...mk-NQVKTINHLGQVVYQESVEFYKEK....LSVHSKDFLQNALIPQLYEWSNAYKAAVELAK............
G6FBY7_LACLL/1-58                 ...mk-NQEKTINHLGQVVYQESVEFYKEK....LSVYSKDFLQNALIPQLYEWSNAYKAAVELTK............
T0TM07_LACLC/1-56                 .....MEQ--VVTHYRETIQQHSVEWYKKQllkdFSVQ---FIKDSLLPQLFEWSNAYKAAVELTK............
A0A059NT92_9CAUD/1-58             ...mk-NQEKTINHLGQVVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAIELTK............
Q9MBY0_9CAUD/5-61                 .....MEQEKTINHLGQIVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAIELTK............
T0VC30_LACLL/1-57                 .....MEQEKTINHLGQVVYQESVEFYKEK....LSVHSKDFLQNSLIPQLYEWSNAYKAAVELTK............
U6EL65_LACLL/1-58                 ...mk-NQVKTINHLGQVVYQESVEFYKEK....LSVNSKDFLQNSLIPQLYEWSNAYKAAVELTK............
V2WCD6_LACLL/1-57                 .....MEQEKTINHLGQVVYQESVEFYKEK....LSVHSKDFLQNSLIPQLYEWSNAYKAAVELTK............
U5PMN2_LACLL/5-61                 .....MEKVKTINHLGQVVYQESVEFYKEK....LSVYSKEFLQNSLIPQLYEWSNAYKAAVELTK............
T0TRS6_LACLC/5-61                 .....MEQVKTINHLGQVVYQESVEFYKEK....LSVYSKDFLQNSLIPQLYEWSNAYKAAVELTK............
#=GC seq_cons                     .....MEQ.KTINHLGQlVYQESVEFYKEK....LSVhSKDFLpNSLIPQLYEWSNAYKAAVELTK............
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