GenomeNet

Database: Pfam
Entry: Phage_connector
LinkDB: Phage_connector
Original site: Phage_connector 
#=GF ID   Phage_connector
#=GF AC   PF05352.8
#=GF DE   Phage Connector (GP10)
#=GF AU   Finn RD
#=GF SE   Pfam-B_13828 (release 7.8)
#=GF GA   25.00 25.00;
#=GF TC   25.30 26.80;
#=GF NC   20.50 24.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   11526317
#=GF RT   Structure determination of the head-tail connector of
#=GF RT   bacteriophage phi29. 
#=GF RA   Simpson AA, Leiman PG, Tao Y, He Y, Badasso MO, Jardine PJ,
#=GF RA   Anderson DL, Rossmann MG; 
#=GF RL   Acta Crystallogr D Biol Crystallogr 2001;57:1260-1269.
#=GF RN   [2]
#=GF RM   11130079
#=GF RT   Structure of the bacteriophage phi29 DNA packaging motor. 
#=GF RA   Simpson AA, Tao Y, Leiman PG, Badasso MO, He Y, Jardine PJ,
#=GF RA   Olson NH, Morais MC, Grimes S, Anderson DL, Baker TS, Rossmann
#=GF RA   MG; 
#=GF RL   Nature 2000;408:745-750.
#=GF DR   INTERPRO; IPR008016;
#=GF DR   SCOP; 1jnb; fa;
#=GF CC   The head-tail connector of bacteriophage 29 is composed of 12 
#=GF CC   36  kDa subunits with 12 fold symmetry. It is the central
#=GF CC   component  of a rotary motor that packages the genomic dsDNA
#=GF CC   into pre-formed  proheads. This motor consists of the head-tail
#=GF CC   connector, surrounded  by a 29-encoded, 174-base, RNA and a
#=GF CC   viral ATPase protein [1,2].
#=GF SQ   52
#=GS Q859I4_9CAUD/6-229       AC Q859I4.1
#=GS A6XAD7_9CAUD/21-292      AC A6XAD7.1
#=GS Q7Y3E7_9CAUD/18-300      AC Q7Y3E7.1
#=GS J0RFW6_BARTA/1-149       AC J0RFW6.1
#=GS R3D2K8_ENTFL/47-322      AC R3D2K8.1
#=GS M4W5Z5_9CAUD/7-290       AC M4W5Z5.1
#=GS E0GLG8_ENTFL/47-322      AC E0GLG8.1
#=GS R3ABP2_ENTFL/47-322      AC R3ABP2.1
#=GS I3PV47_9CAUD/6-285       AC I3PV47.1
#=GS VG10_BPB03/7-284         AC Q37891.1
#=GS R5FZI8_9ACTN/28-289      AC R5FZI8.1
#=GS R3XF72_ENTFL/47-322      AC R3XF72.1
#=GS C7VFU4_ENTFL/47-322      AC C7VFU4.1
#=GS R2K864_ENTFL/47-322      AC R2K864.1
#=GS X6QGG0_ENTFL/47-322      AC X6QGG0.1
#=GS C7CWI8_ENTFL/47-322      AC C7CWI8.1
#=GS R3EXK0_ENTFL/46-205      AC R3EXK0.1
#=GS R2JXP7_ENTFL/47-322      AC R2JXP7.1
#=GS R2MIZ4_ENTFL/47-322      AC R2MIZ4.1
#=GS R3X962_ENTFL/47-322      AC R3X962.1
#=GS F0PIK6_9VIRU/47-322      AC F0PIK6.1
#=GS R3EX54_ENTFL/3-104       AC R3EX54.1
#=GS VG10_BPPZA/8-285         AC P07535.1
#=GS Q37995_BPCP1/2-315       AC Q37995.1
#=GS I6PC12_9CAUD/224-401     AC I6PC12.1
#=GS B7SSN1_BPNF/7-284        AC B7SSN1.1
#=GS G9M951_BPPS4/12-308      AC G9M951.1
#=GS G9M972_BPPSP/12-308      AC G9M972.1
#=GS B3VMP6_BPPH2/8-285       AC B3VMP6.1
#=GS A0A033HQE4_STAAU/13-308  AC A0A033HQE4.1
#=GS I3PV76_9CAUD/6-285       AC I3PV76.1
#=GS G9J3I3_9CAUD/16-282      AC G9J3I3.1
#=GS C2DGT8_ENTFL/47-322      AC C2DGT8.1
#=GS VG10_BPPH2/8-285         AC P04332.1
#=GS VG10_BPPH2/8-285         DR PDB; 1IJG I; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1H5W A; 17-284;
#=GS VG10_BPPH2/8-285         DR PDB; 1IJG L; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1IJG B; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1JNB G; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1JNB H; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1FOU C; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1JNB E; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1FOU B; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1IJG K; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1IJG G; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1FOU E; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1IJG H; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1JNB K; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1JNB A; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1JNB D; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1FOU J; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1IJG D; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1FOU L; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1IJG E; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1FOU G; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1JNB F; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1H5W C; 18-283;
#=GS VG10_BPPH2/8-285         DR PDB; 1FOU D; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1FOU A; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1IJG F; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1JNB J; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1IJG A; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1FOU K; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1FOU H; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1JNB B; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1JNB I; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1H5W B; 16-284;
#=GS VG10_BPPH2/8-285         DR PDB; 1IJG C; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1FOU I; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1JNB L; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1JNB C; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1FOU F; 11-285;
#=GS VG10_BPPH2/8-285         DR PDB; 1IJG J; 11-285;
#=GS I3PV21_9CAUD/6-285       AC I3PV21.1
#=GS B1ABJ1_9CAUD/10-238      AC B1ABJ1.1
#=GS Q4ZE61_9CAUD/13-307      AC Q4ZE61.1
#=GS S4GK77_ENTFC/51-323      AC S4GK77.1
#=GS R3RKH7_ENTFL/47-322      AC R3RKH7.1
#=GS W6E8C8_9CAUD/12-307      AC W6E8C8.1
#=GS R2KTE9_ENTFL/47-322      AC R2KTE9.1
#=GS Q859K6_BP44A/6-229       AC Q859K6.1
#=GS R5N5I0_9BACE/19-287      AC R5N5I0.1
#=GS A8D3T6_9CAUD/6-229       AC A8D3T6.1
#=GS X6RZ46_ENTFL/47-322      AC X6RZ46.1
#=GS S4GEE2_ENTFL/47-322      AC S4GEE2.1
#=GS R3MZ26_ENTFL/47-322      AC R3MZ26.1
#=GS R3L0D4_ENTFL/47-322      AC R3L0D4.1
#=GS Q9FZW5_BPGA1/7-287       AC Q9FZW5.1
#=GS R3AF73_ENTFL/47-322      AC R3AF73.1
#=GS R2GFV1_ENTFL/47-322      AC R2GFV1.1
#=GS E5G066_9VIRU/3-270       AC E5G066.1
Q859I4_9CAUD/6-229                  vnntyfnqapnfssnfnfqfqkrltkediyfivpdylipddclqihklydncm----....--------....---..-------.-------------..-------------------.-------....----.------.----.-------..-..----......-----.---.--...----....-.-----...------Sg...........nfVVMQN....K....PIqYN.SDIEIIEHYTDELAEVALSrFSLIMQAKF--SKIFKSEIN...DESINQLVSEIYNGAPFV..KMSPM..FN..........ADDdiIDLT....S.NSVIP.ALT.EMKREYQNKISELSNYLGINSLAVDKESGVSDEEAKSNRGFTTSNSNIYLKGRE-PITFLSKRY.GLDIK--------pyyddet............................................
A6XAD7_9CAUD/21-292                 ...........................................sssearqaql----....--------....---..-EHMYRR.QLMGKCLSRFTWE..GLPNGIDPRFIEATIFNNG.YSVFYFD....TMFEmFMAMPA.TISG.PLDIQDN..P..TGYR......VSRNG.I--.--...----....Y.S--RE...VSA-SDS..............VCIWG....N....QV.RE.PEIDLVLSYAARLAQIDRT.IEIDLLNERNPMIVACSQDQ...RLTIQNLISRIYDGEPVV..WGTEN..LSme......nlANT..IGVFplnqN.AGAGA.VSSiKHMESKSKIWGEALTMLGIMNVNSEKRERMVVEEASANSGQVLASRESFMKPRLLACEQINEKF.GLNISCS------wavd...............................................
Q7Y3E7_9CAUD/18-300                 ............................................tftddiaer----....---VKLHK....QNY..FNIIYSR.YVEFLPL-LISYE..NY--DLDSLLIESYL-RAG.YGVAIGE....TKTG.KIDVLG.YCSV.NTNYLQ-..PikEPLQ......GKDIT.FIH.NN...ILPKg..kY.K---E...LTRYSDGn............fVVLRN....K....RA.SFlCDYNIITHYVMEMSEIANS.RYSISIQAKVNTFIRNEGGSkdgQVMANNLFN----GVPYT..ATTPK..FD.........pEEH..ILTF....NnASAVS.FLP.ELKREQQNKISELNAMLGLNTLGVDKESGVSEIEAQSNTAFKKANENIYLGIRNEALNLINNKY.GLNIHAEYRDNM-v..................................................
J0RFW6_BARTA/1-149                  .....................................................----....MNKIENNK....NDEipSFQHEYD.FIRSVFIDRFVWNceYFKNIYAPTYIESNLFEYG.MMGLFKD....EKYG.FMLLPCvGQSQ.NLDIYGE..P..VEYK......CTGDG.YSK.IV...----....-.-----...-------..............-----....-....--.--.-------------------.--------------------...------------------..-----..--..........---..----....-.-----.---.----------------------------------------------------------------.-------------skddivlltnnnigtspssqvreyasriteicnncanaknlevlllhkqei
R3D2K8_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
M4W5Z5_9CAUD/7-290                  .....................................................TYMN....PNQIQKHE....GNR..YYWHYVK.YLSQLTFQLFEWE..NLPKTVDPRYMEMMLHTHG.YVGFFHD....ETLD.YMAVQG.SAGV.KINRYLQ..P..TVFK......TATPD.YTNrSF...NIYN....FgDNLEL...IDKKNTG..............VVIWN....N....DM.HL.PSMESIMMFAQDLAELKEI.IRINQNAQKTPVLITAEDTN...KFSMMNIYNQYEGNAPVI..VANKH..FD..........PKS..INVF....K.TDAPF.VVD.KLNDQKNAIWSEFMTWLGINNSNIDKKERLVQAEATSNDEQIEASGNIMLKAREEACERINQLYpDLNVSVRMRTDI-l..................................................
E0GLG8_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
R3ABP2_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
I3PV47_9CAUD/6-285                  ..........................................sywnqgdkill----....-------K....NDV.fMVDRYYD.YYSNMGLNRFRWK..NLPPGMESRHIEQALFNEG.QAVFFKNtdpnEPYG.FLCLPC.APSN.GQNIYGD..P..VDFN......GIGVNkYFT.NL...----....-.-----...-SPLN-A..............VRILD....N....DN.GL.APVRHIAYYTYLMSQIEMT.INMNLDQQKFPIIIGATQKN...KLSMENLYEKYSSFEPNI..LVDEK..LAqa.....lqeGKG..FDAL....N.TQAPY.LLD.KLADFKKTCENELLTFLGINNTNNDKRERLLTDEVNANNSQITFVLEMAYKNRLDACKRINEMF.GLNLEVEK-----vvnll..............................................
VG10_BPB03/7-284                    .....................................................SYKS....INDIQRMR....GNR..WYYHYYQ.YLCSLAYQLFEWE..RLPPSVDPSYLEKSIHQFG.YVGFYKD....PRIG.YIACQG.ALSG.TVDHYNL..P..DRFH......ASSVG.YQN.TF...KLYN....Y.S---D...MKEKNMG..............VAIYN....N....DL.KC.STLPALEMFAQDLAELKEI.IAVNQNAQKTPVLIAANDNN...QLSLKNIYNQYEGNAPVI..FVHES..LD..........LDN..LKVF....K.TDAPY.VVD.KLNAQKNAVWNEVMTYLGIKNANLEKKERMVTSEVDSNDEQIESSGNIYLKARQEACNKISELY.GLNLKVKFRYDIV...................................................
R5FZI8_9ACTN/28-289                 ............................................siltstqln----....--------....---..--QIYQC.YFMNIAATVFEWE..NLPDTVDADFLEFALIQDG.KAAFCND....RDRG.FLGLRA.ADQS.VLNLYGY..P..VKIN......GYGIN.FNQ.EY...N---....-.-----...---ADEF..............VLIKN....N....PM.WT.PTLFYINYFVDKIAKTQQI.IDINVNAQKTPVILKGTANQ...KLALANLFAKYDGSQGYI..FIDKD..ND.........fNDC..FGSV....N.TGAPL.VAK.DLYTLLESYKAEFLSFLGVNNVQNEKAERLITDEVNANNQFVSINLETMLYERKNACKQINERF.GLNISVKPRV---qse................................................
R3XF72_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
C7VFU4_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
R2K864_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
X6QGG0_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
C7CWI8_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
R3EXK0_ENTFL/46-205                 .....................................gnnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGK---...------------------..-----..--..........---..----....-.-----.---.----------------------------------------------------------------.-------------kkrp...............................................
R2JXP7_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
R2MIZ4_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
R3X962_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVIQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
F0PIK6_9VIRU/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYIVKGKKNG...QL-LQVLQSKIQNGDLFV..GVEEG..SD.........iTEK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
R3EX54_ENTFL/3-104                  .............................leveegsditdkiekldlnvtdrt----....--------....---..-------.-------------..-------------------.-------....----.------.----.-------..-..----......-----.---.--...----....-.-----...-------..............-----....-....--.--.-------------------.--------------------...------------------..-----..--..........---..----....-.-----.--P.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
VG10_BPPZA/8-285                    .....................................................SYRS....INEIQRQK....RNR..WFIHYLN.YLQSLAYQLFEWE..NLPPTINPSFLEKSIHQFG.YVGFYKD....PVIS.YIACNG.ALSG.QRDVYNQ..A..TVFR......ASSPV.YQK.EF...KLYN....Y.R---D...MKEDDMG..............VVIYN....N....DM.SF.PTTPTLELFAAELAELKEI.ISVNQNAQKTPVLIRANDNN...QLSLKQVYNQYEGNAPVI..FAHEA..LD..........SDS..IEVF....K.TDAPY.VVD.KLNAQKNAVWNEMMTFLGIKNANLEKKERMVTDEVSSNDEQIESSGTVFLKSREEACEKINELY.GLDVKVRFRYDIV...................................................
Q37995_BPCP1/2-315                  ....................................................s-YKNykrhLGKIELNKetveRNRlaFFEFYFN.YFYNIVVNYFTWE..GLPNDIDELFIEKKLIENG.HVAFFHD....DTFG.YIAQGG.TRGE.RLNHYDQ..P..LTYQp...vnASSMN.YFK.QM...EIAYtendF.RVIEE...LHKDNPDkik........rpcIVIPN....N....NF.YE.PYIGYLELFCEKLADIELT.IQLNRNAQITPYFIFADNTN...VLSMKNIFNKIANFEPVV..YLNKQ..KDqdgqdsfkqlSDY..IQVF....R.TDAPF.LLD.KLHDEKLRVMNQLLTFIGINNNPSDKKERLVVSEAISNNGVISANIEVGWKSRRKFVELINKCY.GLEISVKPAETIQ...................................................
I6PC12_9CAUD/224-401                ...............................hevtrshpelgtfvtfrnkqtw----....--------....---..-------.-------------..-------------------.-------....----.------.----.-------..-..----......-----.---.--...----....-.-----...-------..............-----....N....NV.PA.TDMGRVEFFAMELANIASL.ARSVRLKMRTPYLVAT-KKG...QVSQIAVMNAIRAGEEVI..QLNEN..ID..........VEQ.iIQVL....N.LQIPVdYLP.RLKDEFNNKLSEMLTMFGINNIGVDKKERLVSAEAEGNNQLINASGNVYLDSRLEAIELLNLRF.GGKV---------ag.................................................
B7SSN1_BPNF/7-284                   .....................................................SYRS....INENQRMR....GNR..WFYHYYQ.YLCSLAYQLFEWE..GLPPSVDPSYLEKSIHQFG.YVGFYRD....PRIG.YIACQG.ALSG.TIDHYNL..P..DRFH......ASSVG.YQN.TF...KLYN....Y.K---D...MKEKNMG..............VVIYN....N....DL.KC.STLPSLEMFAQDLAELKEI.ISVNQNAQKTPVLIAANDNN...QLSLKNIYNQYEGNAPVI..FVHES..LD..........LDN..LKVF....K.TDAPY.VVD.KLNAQKNAVWNEVMTYLGIKNANLEKKERMVTSEVDSNDEQIESSGNIYLKARQEACEKINELY.GLNLKVKFRYDIV...................................................
G9M951_BPPS4/12-308                 ..................................................lsk---E....INKRVVEH....RNR..FKRLMFNrYLEFLPLLINYTN..RDTVGIDFIQLESALRQNI.NVVVGKA....RN-E.QIMILG.YVNN.--TYFNQ..A..PNFS.....sNFNLQ.FQK.RLtkeDIYFivpdY.LIPDE...C-----LqihkiydncmsgnfVVMQN....K....PIqYN.SDIEIIEHYTDELSEVVLSrFSLIMQA--KFSKIFKSDIN...DESVNQLVSEIYNGAPFV..KMSPM..FN..........ADDdiIDLT....S.NSVIP.ALT.EMKREYQNKISELSNYLGINSLAVDKESGVSDEEAKSNRGFTTSNSNIYLKGRE-PITFLSKRY.GLDIKP-------yyddevt............................................
G9M972_BPPSP/12-308                 ...................................................ls--KE....INKRVVEH....RNR..FKRLMFNrYLEFLPLLINYTN..RDTVGIDFIQLESALRQNI.NVVVGKA....RN-E.QIMILG.YVNN.--TYFNQ..A..PNFS.....sNFNFQ.FQK.RLtkeDIYFivpdY.LIPDE...C-----LqihkiydncmsgnfVVMQN....K....PIqYN.SDIEIIEHYTDELSEVVLSrFSLIMQA--KFSKIFKSDIN...DESVNQLVSEIYNGAPFV..KMSPM..FN..........ADDdiIDLT....S.NSVIP.ALT.EMKREYQNKISELSNYLGINSLAVDKESGVSDEEAKSNRGFTTSNSNIYLKGRE-PITFLSKRY.GLDIKP-------yyddevt............................................
B3VMP6_BPPH2/8-285                  .....................................................TYRS....INEIQRQK....RNR..WFIHYLN.YLQSLAYQLFEWE..NLPPTINPSFLEKSIHQFG.YVGFYKD....PVIS.YIACNG.ALSG.QRDVYNQ..A..TVFR......AASPV.YQK.EF...KLYN....Y.R---D...MKEEDMG..............VVIYN....N....DM.AF.PTTPTLELFAAELAELKEI.ISVNQNAQKTPVLIRANDNN...QLSLKQVYNQYEGNAPVI..FAHEA..LD..........SDS..IEVF....K.TDAPY.VVD.KLNAQKNAVWNEMMTFLGIKNANLEKKERMVTDEVSSNDEQIESSGTVFLKSREEACEKINELY.GLNVKVKFRYDIV...................................................
A0A033HQE4_STAAU/13-308             ..................................................lsk---E....INKRVVEH....RNR..FKRLMFNrYLEFLPLLINYTN..RDTVGIDFIQLESALRQNI.NVVVG-E....ARNK.QIMILG.YVNN.--TYFNQ..A..PNFS.....sNFNFQ.FQK.RLtkeDIYFivpdY.LIPDEclqIHK---Qydnc.....msgnfVVMQN....K....PIqYN.SDIEIIEHYTDELAEVVLSrFSLIMQAKF--SKIFKSEIN...DESINQLVSEIYNGAPFV..KMSPM..FN..........ADDdiIDLT....S.NSVIP.ALT.EMKREYQNKISELSNYLGINSLAVDKESGVSDEEAKSNRGFTTSNSNIYLKGRE-PITFLSKRY.GLDIK--------pyyddet............................................
I3PV76_9CAUD/6-285                  ..........................................sywnqgdkill----....-------K....NDV.fMVDRYYD.YYSNMGLNRFRWK..NLPPGMESRHIEQALFNEG.QAVFFKNtdpnEPYG.FLCLPC.APSN.GQNIYGD..P..VHFN......GIGVNkYFT.NL...----....-.-----...-SPLN-A..............VRILD....N....DN.GL.APVRHIAYYTYLMSQIEMT.INMNLDQQKFPTIIGATKQN...ELSMKRLYEKYSNFEPNI..LVDEK..LAqa.....lqeGKG..FDAL....N.TQAPY.LLD.KLADFKKTCENELLTFLGINNTNNDKRERLLTDEVNANNSQITFVLEMAYKNRLDACKRINEMF.GLNLEVEK-----vvnll..............................................
G9J3I3_9CAUD/16-282                 .....................................lnenticdnqtrlflh----....--------....---..----Y--.--KLMACNRFKWE..NLPTGLESRHIEDFLFENG.QCFFFKD....DKLG.LMCLPC.HGLS.DLNIYGD..N..IKLS......IVSRN.G--.--...---E....Y.Q--NI...LEDGKDG..............VKIRA....N....DL.CL.PTSHFISHYAQKMDDIETV.IKRNLKQQMKPFFVTATNNN...LLSVKNIVNDVDNGKEVV..ILDKD..LGe.......qgFDG..FKML....Q.TGVIY.LVD.KLEDERKSVESELLSFLGLDNANTEKRERLLVDEVNANNEYIETNLDMEYKTRLLACKMINEKF.GTNIKVT------kvvds..............................................
C2DGT8_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTQ.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
VG10_BPPH2/8-285                    .....................................................TYRS....INEIQRQK....RNR..WFIHYLN.YLQSLAYQLFEWE..NLPPTINPSFLEKSIHQFG.YVGFYKD....PVIS.YIACNG.ALSG.QRDVYNQ..A..TVFR......AASPV.YQK.EF...KLYN....Y.R---D...MKEEDMG..............VVIYN....N....DM.AF.PTTPTLELFAAELAELKEI.ISVNQNAQKTPVLIRANDNN...QLSLKQVYNQYEGNAPVI..FAHEA..LD..........SDS..IEVF....K.TDAPY.VVD.KLNAQKNAVWNEMMTFLGIKNANLEKKERMVTDEVSSNDEQIESSGTVFLKSREEACEKINELY.GLNVKVKFRYDIV...................................................
#=GR VG10_BPPH2/8-285         SS    .....................................................XXX-....TSHHHHHH....HHH..HHHHHHH.HHHHHHHHSEEEE..SS-TTS-HHHHHHHHHSSS.EEEEEEE....TTTE.EEEE-E.EEES.SEBTTSB..E..SEEE......EESSS.BEE.EE...EE-T....S.S---S...S-SSSEE..............EEEES....S....TT.T-.-SHHHHHHHHHHHHHHHHH.HHHHHHHTT-SEEEEESSGS...SSHTTTHHHH--SSSSEE..EE-TT..--..........TTS..EEEE....E.-----.-HH.HHHHHHHHHHHHHHHHTT--XXXXXXXXXXXXXXXXXTHHHHHHHHHHHHHHHHHHHHHHHHTS.S--TEEEESSST-...................................................
I3PV21_9CAUD/6-285                  ..........................................sywnqgdkill----....-------K....NDV.fMVDRYYD.YYSNMGLNRFRWK..NLPPGMESRHIEQALFNEG.QAVFFKNtdpnEPYG.FLCLPC.APSN.GQNIYGD..P..VHFN......GIGVNkYFT.NL...----....-.-----...-SPLN-A..............VRILD....N....DN.GL.APVRHIAYYTYLMSQIEMT.INMNLDQQKFPTIIGATKQN...ELSMKRLYEKYSNFEPNI..LVDEK..LAqa.....lqeGKG..FDAL....N.TQAPY.LLD.KLADFKKTCENELLTFLGINNTNNDKRERLLTDEVNANNSQITFVLEMAYKNRLDACKRINEMF.GLNLEVEK-----vvnll..............................................
B1ABJ1_9CAUD/10-238                 ...........................................sqslgyvfag----....--------....---..-------.-------------..-------------------.-------....----.YVS---.-MNG.KYDLFGR..P..TKIKitpfvnANGTT.TWQ.SF...TVAN...sI.NTFKD...EDNKDKA..............VIGYN....T....HL.A-.EGLEWLELLCCKLAILETA.KIDNVNLLKQPLTIIADEYN...DFSADELVNEQSSMARVIkvFSGAG..KE.........lLDS..LKVH....S.TGAEN.YID.TYQKQIEIELKEAYERLGISTNVVDKKERVLQNEQLTQNQISNLVYAEKYKMRLKFIEDITKVF.G------------dmgitcepil.........................................
Q4ZE61_9CAUD/13-307                 ...............skeiskrvvehrnrfkrlmfnryleflpllinytnrdt----....--------....---..-------.-------------..---VGIDFIQLESALRQNI.NVVVG-E....ARNK.QIMILG.YVNN.--TYFNQ..A..PNFS.....sNFNFQ.FQK.RLtkeDIYFivpdY.LIPDD...C-----LqihklydncmsgnfVVMQN....K....PIqYN.SDIEIIEHYTDELAEVALSrFSLIMQAKF--SKIFKSEIN...DESINQLVSEIYNGAPFV..KMSPM..FN..........ADDdiIDLT....S.NSVIP.ALT.EMKREYQNKISELSNYLGINSLAVDKESGVSDEEAKSNRGFTTSNSNIYLKGRE-PITFLSKRY.GLDIK--------pyyddet............................................
S4GK77_ENTFC/51-323                 ......................................fkefermqaeilkvq----....--------....---..-------.-FQDMLINLFTYT..NVPPTLNIAQLETMLRNFG.GGVCVGK....DDYG.DIVILG.RSDElGYNLYGD..I..MPSY......FDSNN.YLS.NK...KVIT....P.R----...-NLKGDY..............VVFYN....KqsflDF.YS.TDFQIVNHYCKMLATIKAT.ERMNWLQMRSPYFLKGQKNG...V-S-TQIFAQKL-MAGDL..FVDID..ADa.......siQDK..LAKV....D.LSVPD.RTS.SLQTAYRNTTNEMLTLFGVYNNPDQKKERMISGEASANNHVIEGMGDIYYNARRHAVNLLNLAF.GTEIEVHWNST--va.................................................
R3RKH7_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
W6E8C8_9CAUD/12-307                 ..................................................lsk---E....INKRVVEH....RNR..FKRLMFNrYLEFLPLLINYTN..RDTVGIDFIQLESALRQNI.NVVVG-E....ARNK.QIMILG.YVNN.--TYFNQ..A..PNFS.....sNFNFQ.FQK.RLtkeDIYFivpdY.LIPDEclqIHK---Qydnc.....msgnfVVMQN....K....PIqYN.SDIEIIEHYTDELAEVVLSrFSLIMQAKF--SKIFKSEIN...DESINQLVSEIYNGAPFV..KMSPM..FN..........ADDdiIDLT....S.NSVIP.ALT.EMKREYQNKISELSNYLGINSLAVDKESGVSDEEAKSNRGFTTSNSNIYLKGRE-PITFLSKRY.GLDIK--------pyyddet............................................
R2KTE9_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
Q859K6_BP44A/6-229                  vnntyfnqapnfssnfnfqfqkrltkediyfivpdylipddclqihklydncm----....--------....---..-------.-------------..-------------------.-------....----.------.----.-------..-..----......-----.---.--...----....-.-----...------Sg...........nfVVMQN....K....PIqYN.SDIEIIEHYTDELAEVALSrFSLIMQAKF--SKIFKSEIN...DESINQLVSEIYNGAPFV..KMSPM..FN..........ADDdiIDLT....S.NSVIP.ALT.EMKREYQNKISELSNYLGINSLAVDKESGVSDEEAKSNRGFTTSNSNIYLKGRE-PITFLSKRY.GLDIK--------pyyddet............................................
R5N5I0_9BACE/19-287                 ................................................dakiv----....-----RKF....DER.vTFDHFVS.QLYLLAINRYTWA..GLPDTVSARALEQALIFNG.AVCFFKD....DVMG.YLCLPC.AKAG.SFNIYNI..P..TT--......----R.YIN.TA...SGYH....H.K----...ATEKD-S..............AIIFN....D....QT.FR.PFMPEIYYFAKKFTMIEKA.KDVNTRLQMKPKGIFVNKDN...VNSAKHAINEAEDGKPFV..LVDDTdgFS..........ADT..KGVL....D.FSVPC.ILE.QLEKEKNCIWSEYLTRLGYNNLNIYKKERLVESEAEANEEHILALRDGGLFMRREAIKKIKRLF.-------------pdlseirvdfnpn......................................
A8D3T6_9CAUD/6-229                  vnntyfnqapnfssnfnfqfqkrltkediyfivpdylipdeclqihklydncm----....--------....---..-------.-------------..-------------------.-------....----.------.----.-------..-..----......-----.---.--...----....-.-----...------Sg...........nfVVMQN....K....PIqYN.SDIEIIEHYTDELAEVVLSrFSLIMQAKFSKVF--KSEIN...DESINQLVSEIYNGAPFV..KMSPM..FN.........aEDD.iIDLT....S.NSVIP.ALT.EMKREYQNKISELSNYLGINSLAVDKESGVSDEEAKSNRGFTTSNSNIYLKGRE-PITFLSKRY.GLDIK--------pyyddet............................................
X6RZ46_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
S4GEE2_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERFNILQMRTPFIFKGKKNG...TV-ARTMQKKIFSGDLVI..EVEEG..SE.........fTDK..IDKL....D.LNVQD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
R3MZ26_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYIVKGKKNG...QL-LQVLQSKIQNGDLFV..GVEEG..SD.........iTEK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
R3L0D4_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTQ.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
Q9FZW5_BPGA1/7-287                  .....................................................SYKT....IGEIQRRR....GNL..WFRTYQR.YLFSLAYQMFEWQ..GLPKTVDPIFLEKQLHQRG.FVAFYKD....EMYG.YLGVQG.TLSG.QINLYNQ..P..NFYT......ASAPT.YQK.SF...PLYW....Y.DMGED...LNEKGQG..............IVIYN....N....LE.RM.PTLDILNLYAMNLAELKET.IYVNQNAQKTPVIIKAGDND...LFSMKQVYNKYEGNEPVI..FAGKK..FN..........TDD..IEVL....K.TDAPY.VAD.KLTMLFKDQWNEAMTFLGLSNANTDKKERLIQSEVESNNDQIQGSANIYLAPRQEACRLINEYY.GLNVSVKLRKELV...................................................
R3AF73_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYIVKGKKNG...QL-LQVLQSKIQNGDLFV..GVEEG..SD.........iTEK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
R2GFV1_ENTFL/47-322                 ......................................nnyvqfeaiqtfili----....--------....---..------R.QIKDMLINLFKYE..NMPPTLNTAQLETMLRQMGgGVCVGKD....ELGD.LVILGR.ADEL.GYNLYGNviP..SLFD......GN-NN.FLQ.SK...KVIT....N.R----...-NLKGDY..............VVFYNkqsfN....DF.YA.TDYDIVEHYAKQLATIKAT.ERMNIMQMRSPYILKGKKNG...QVG-QVLQSKIQKGDLFL..EVEEG..SD.........iTDK..IEKL....D.LNVTD.RTP.SLQNAYRNTFNEMLTLFGIYNNPEQKKERMIDREASSNNHVIEGMGDIYFNARQHAVDLLNLAF.GTDIKVQWNSTV-a..................................................
E5G066_9VIRU/3-270                  ...................................................kk--RN....INKVCADR....RGL..LFLLYK-.---NLATNVFKWE..GLPNGIESRHIENFLFEHG.QVGFYND....ENLG.MICLPI.SNSG.ELNIYGD..P..TKFY......MYSKN.---.--...--GN....Y.S---K...TIPSDKV..............IRCMD....N....PN.LV.PTKSYVNYYVQEMLDIETA.IRANLRKQVKPYFAIATDKN...KYSVKSIIDDYENGEDVV..IIDKT..LGe.......dgFDG..LKLL....T.ANVEY.LVD.KLRAEERSRESALLTYLGVSNVNMEKKERLITDEVNGNEEFVNLNLSIRAKGRLDAMIELQKIY.-------------pgvkcvlnmey........................................
#=GC SS_cons                        .....................................................XXX-....TSHHHHHH....HHH..HHHHHHH.HHHHHHHHSEEEE..SS-TTS-HHHHHHHHHSSS.EEEEEEE....TTTE.EEEE-E.EEES.SEBTTSB..E..SEEE......EESSS.BEE.EE...EE-T....S.S---S...S-SSSEE..............EEEES....S....TT.T-.-SHHHHHHHHHHHHHHHHH.HHHHHHHTT-SEEEEESSGS...SSHTTTHHHH--SSSSEE..EE-TT..--..........TTS..EEEE....E.-----.-HH.HHHHHHHHHHHHHHHHTT--XXXXXXXXXXXXXXXXXTHHHHHHHHHHHHHHHHHHHHHHHHTS.S--TEEEESSST-...................................................
#=GC seq_cons                       .............................................t.tphhhh...............................p..lpshhlslFcaE..NhPsolsstpLEshL+QhG.tVshhKD....-hhs.hlhlst.Asph.shNlYsp..P..shFs......us.ss.a.p.sh...clhp......c........s.cs.h..............VVhaN....N....Dh.Ys.oDh-IlEHYAcpLApIcto..phNh.th+oPhlltupcss...plu.psL.scIppGs.hl...lc-s...-..........sDc..I-hh....s.hsVss.hss.pLpstapNshNEhLThhGI.Nss.pKKERhl-cEAsSNNchIpu.usIYhpuRpcAlchLNhtF.Gh-IKVphp.p..s..................................................
//
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