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Database: Pfam
Entry: Phage_head_chap
LinkDB: Phage_head_chap
Original site: Phage_head_chap 
#=GF ID   Phage_head_chap
#=GF AC   PF11113.3
#=GF DE   Head assembly gene product
#=GF AU   Pollington J, Finn RD
#=GF SE   PRODOM
#=GF GA   25.00 25.00;
#=GF TC   26.50 29.70;
#=GF NC   24.20 23.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   2685327
#=GF RT   Membrane-associated assembly of a phage T4 DNA entrance vertex
#=GF RT   structure studied with expression vectors. 
#=GF RA   Michaud G, Zachary A, Rao VB, Black LW; 
#=GF RL   J Mol Biol. 1989;209:667-681.
#=GF RN   [2]
#=GF RM   2668289
#=GF RT   Transcript analyses of the uvsX-40-41 region of bacteriophage
#=GF RT   T4. Changes in the RNA as infection proceeds.
#=GF RA   Hinton DM;
#=GF RL   J Biol Chem. 1989;264:14432-14439.
#=GF DR   INTERPRO; IPR021049;
#=GF CC   This head assembly protein is also refereed to as gene product
#=GF CC   40 (Gp40). A specific gp20-gp40 membrane insertion structure
#=GF CC   constitutes the T4 prohead assembly initiation complex [1]. This
#=GF CC   protein in T4 stimulates head formation [2].
#=GF SQ   33
#=GS Q6J2M5_9CAUD/3-57    AC Q6J2M5.1
#=GS C3V227_BPR51/44-99   AC C3V227.1
#=GS G0X5G4_9CAUD/44-99   AC G0X5G4.1
#=GS D9IC96_9CAUD/18-71   AC D9IC96.1
#=GS Q19CY3_9CAUD/27-80   AC Q19CY3.1
#=GS E5EPM0_9CAUD/33-88   AC E5EPM0.1
#=GS C4MYJ2_9CAUD/22-77   AC C4MYJ2.1
#=GS Q5QC02_9CAUD/38-94   AC Q5QC02.2
#=GS E3SFD2_9CAUD/41-97   AC E3SFD2.1
#=GS E5FIG1_9CAUD/41-97   AC E5FIG1.1
#=GS Q06ET7_BPR32/44-99   AC Q06ET7.1
#=GS Q7Y595_BPR69/43-99   AC Q7Y595.1
#=GS Q76XK3_9CAUD/22-77   AC Q76XK3.1
#=GS C4MZD1_9CAUD/38-94   AC C4MZD1.1
#=GS Q6RHT1_9CAUD/21-75   AC Q6RHT1.1
#=GS D7RM50_9CAUD/40-96   AC D7RM50.1
#=GS E5E456_9CAUD/43-98   AC E5E456.1
#=GS A7XEW7_9CAUD/22-77   AC A7XEW7.1
#=GS G1FHN9_9CAUD/44-99   AC G1FHN9.1
#=GS D9IE71_BPT4/44-99    AC D9IE71.1
#=GS Q6U9R9_9CAUD/27-80   AC Q6U9R9.1
#=GS D5JF77_9CAUD/18-71   AC D5JF77.1
#=GS E5EYJ4_9CAUD/19-76   AC E5EYJ4.1
#=GS Q56C12_9CAUD/18-71   AC Q56C12.1
#=GS Q76Z77_9CAUD/19-76   AC Q76Z77.1
#=GS F2VX65_9CAUD/44-99   AC F2VX65.1
#=GS VG40_BPT4/44-99      AC P17171.1
#=GS E5DI48_9CAUD/56-112  AC E5DI48.1
#=GS C3V1A1_9CAUD/44-99   AC C3V1A1.1
#=GS Q56EX9_9CAUD/27-80   AC Q56EX9.1
#=GS Q6WIE2_BPKV4/21-67   AC Q6WIE2.1
#=GS G3MUX9_9CAUD/38-94   AC G3MUX9.1
#=GS D4Z9I8_BPAR1/44-99   AC D4Z9I8.1
Q6J2M5_9CAUD/3-57               .......VLQEMTILL-DGQEHLVYITELEMT...DKGLKYAFGTASEGY...EDVLAPHIEKCLQIQV...
C3V227_BPR51/44-99              .......VIQEIVIKLEDGSTHIVYVTKLDWV...DGKVVMDFAVLDQER...KAELAPHVEKCITMQL...
G0X5G4_9CAUD/44-99              .......VIQEIVIKLEDGSTHIVYVTKLDWV...DGKVVMDFAVLDQER...KAELAPHVEKCITMQL...
D9IC96_9CAUD/18-71              .......VIQELLINDENDVAHLVYIHKVYWD...NG-LKVEFSTPDE-N...KEALIPLVHDAIYAQI...
Q19CY3_9CAUD/27-80              .......VKQELLIIDKSGKSHLVYIFDAHIH...DGKLPVDYKAVNE--...NDEIHQLVHEAMNAQI...
E5EPM0_9CAUD/33-88              .......VKQEILITLEDGSNHIVYLHDAKLS...GKELTVDFSTFDEDR...KPEIGEAVKACLQAQ-f..
C4MYJ2_9CAUD/22-77              .......VIQELIIVDEEGEHHIVYIHNVEYDpdtKG-IVVDYSTPSD--...RDVVYPHVIKALTAQI...
Q5QC02_9CAUD/38-94              .......VKQEIMLTLPDGTAHIVYVMNIVIE..kDGKVSVDFGTPSEDR...KEELALHVEKCVTMQI...
E3SFD2_9CAUD/41-97              .......VRQEILLSLPDGSSHIVYVTGIKIE..pSGKVSVDFGTPSEDR...KAELAVHVEKCVTMQI...
E5FIG1_9CAUD/41-97              .......VRQEILLSLPDGSSHIVYVTGIKIE..pSGKVSVDFGTPSEDR...KAELAVHVEKCVTMQI...
Q06ET7_BPR32/44-99              .......VIQEIVIKLEDGSTHIVYVTKLDWV...DGKVVMDFAVLDQER...KAELAPHVEKCITMQL...
Q7Y595_BPR69/43-99              .......VIQEILITLEDGSHHISLYYKTSTGlmvKSKWTLQFLTRTE--...KAELAPHVEKCVTMQV...
Q76XK3_9CAUD/22-77              .......VIQELIIVDEEGEHHIVYIHNVEYDpdtKG-IVVDYSTPSD--...RDVVYPHVIKALTAQI...
C4MZD1_9CAUD/38-94              .......VKQEIMLTLPDGTAHIVYVMNIVIE..kDGKVSVDFGTPSEDR...KEELALHVEKCVTMQI...
Q6RHT1_9CAUD/21-75              .......VLQEAII-EHNGEKYLVFIHNIQYD...NGNLILDWSTPHEDE...KEILYPLVCSMVKLQL...
D7RM50_9CAUD/40-96              .......VKQEIMLTLPDGTAHIVYVMNIVIE..kDGKVSVDFGTPSEDR...KEELALHVEKCVTMQI...
E5E456_9CAUD/43-98              .......VKQEILIKLEDGTDHIVYVTELQIS..gNG-VSYGFSTPSEDR...KAELTPHVEHVLKLQL...
A7XEW7_9CAUD/22-77              .......VIQELIIVDEEGEHHIVYIHNVEYDpdtKG-IVVDYSTPSD--...RDVVYPHVIKALTAQI...
G1FHN9_9CAUD/44-99              .......VIQEIVIKLEDGSTHIVYVTKLDWV...DGKVIMDFAVLDQER...KAELAPHVEKCITMQL...
D9IE71_BPT4/44-99               .......VIQEIVIKLEDGSTHIVYVTKLDWV...DGKVVMDFAVLDQER...KAELAPHVEKCITMQL...
Q6U9R9_9CAUD/27-80              .......VKQELLIIDKKGKSHLVYVFDAHYN...DGKLHVEYKTVSD--...SEELHALVHEALQIQI...
D5JF77_9CAUD/18-71              .......VIQELLINDEKGVAHLVYIHKVFWD...HG-LKVEFSTPDED-...KEALIPLVHDAIYAQI...
E5EYJ4_9CAUD/19-76              .......VIQTITILLPNGTSYDVYITELDYK..rNGELKFSFSVECPEE..lKEEIGVHVESCIRQQ-f..
Q56C12_9CAUD/18-71              .......VIQELLINDEHDVPHLVYIHKVYWD...NG-LKVEFSTPDDD-...KEALIPLVHDAIYAQI...
Q76Z77_9CAUD/19-76              .......VKQELVILV-DGEPFLAYIHELTYK...DGQVHIDWSTPHSEEeimKDELFKHVQAAIQAQI...
F2VX65_9CAUD/44-99              .......VIQEIVIKLEDGSTHIVYVTKLDWV...DGKVVMDFAVLDQER...KAELAPHVEKCITMQL...
VG40_BPT4/44-99                 .......VIQEIVIKLEDGSTHIVYVTKLDWV...DGKVVMDFAVLDQER...KAELAPHVEKCITMQL...
E5DI48_9CAUD/56-112             .......VVQEILITLEDGEEHIVYVTSLHLD..eSGQVSLEFSTLDESR...KADLAPHVEKCIKIQI...
C3V1A1_9CAUD/44-99              .......VIQEIVIKLEDGSTHIVYVTKLDWV...NGKVVMDFAVLDQER...KAELAPHVEKCITMQL...
Q56EX9_9CAUD/27-80              .......VKQELLIIDKKGKSHLVYVFDAHYN...DGKLHVEYKTVSD--...SEELHGLVHEALQIQI...
Q6WIE2_BPKV4/21-67              imiddie----------------VYITDIIVD..nSGRLKIEFVTQHPDK...EDQIRPHVEACI----mkl
G3MUX9_9CAUD/38-94              .......VKQEIMLTLPDGTAHIVYVMNIVIE..kDGKVSVDFGTPSEDR...KEELALHVEKCVTMQI...
D4Z9I8_BPAR1/44-99              .......VIQEIIIKLEDGSTHIVYVTKLDWV...DGKVVMDFAVLDQER...KAELAPHVEKCITMQL...
#=GC seq_cons                   .......VlQEIlIpLcDGssHIVYlpclcas...cG+lslDFuT.s--c...KsELuPHVEKClshQl...
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