GenomeNet

Database: Pfam
Entry: Phytoreo_Pns
LinkDB: Phytoreo_Pns
Original site: Phytoreo_Pns 
#=GF ID   Phytoreo_Pns
#=GF AC   PF05451.6
#=GF DE   Phytoreovirus nonstructural protein Pns10/11
#=GF AU   Moxon SJ
#=GF SE   Pfam-B_15695 (release 8.0)
#=GF GA   19.70 19.70;
#=GF TC   20.00 20.40;
#=GF NC   19.50 18.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   10949951
#=GF RT   Sequence analysis of Pns11, a nonstructural protein of rice gall
#=GF RT   dwarf virus, and its expression and detection in infected rice
#=GF RT   plants and vector insects. 
#=GF RA   Moriyasu Y, Ishikawa K, Kikuchi A, Imanishi S, Tomita S, Akutsu
#=GF RA   K, Omura T; 
#=GF RL   Virus Genes 2000;20:237-241.
#=GF DR   INTERPRO; IPR008777;
#=GF CC   This family consists of Phytoreovirus nonstructural proteins
#=GF CC   Pns10 and Pns11. Genome segment S11 of rice gall dwarf virus
#=GF CC   (RGDV), a member of Phytoreovirus encodes a putative protein of
#=GF CC   40 kDa that exhibits approximately 37% homology at the amino
#=GF CC   acid level to the nonstructural proteins Pns10 of rice dwarf and
#=GF CC   wound tumour viruses, which are other members of Phytoreovirus
#=GF CC   [1].
#=GF SQ   13
#=GS VSR_RGDV/1-352       AC Q9JGV3.1
#=GS VSR_RDVF/1-348       AC Q85434.1
#=GS C1JAW7_9REOV/1-354   AC C1JAW7.1
#=GS E2E2F2_9REOV/1-354   AC E2E2F2.1
#=GS A5HIX9_RGDV/1-351    AC A5HIX9.1
#=GS A2RQI6_9REOV/1-343   AC A2RQI6.1
#=GS VSR_RDVO/1-348       AC P16594.1
#=GS E2E3H0_9REOV/1-354   AC E2E3H0.1
#=GS VSR_WTV/1-347        AC P13094.1
#=GS B5G4T6_RGDV/1-351    AC B5G4T6.1
#=GS A5E4G2_LODEL/15-108  AC A5E4G2.1
#=GS VSR_RDVA/1-348       AC Q85447.1
#=GS Q6Q4H6_RGDV/1-351    AC Q6Q4H6.1
VSR_RGDV/1-352                  ............MDADTERVIKLHVDLIKNHQVYGVLTKFDAIRKLRL....TADGNSNNASRAALSKLQELASSGEAYVVSDLASRTVeTSDIVKAVIFTPHSVISRGKLIKDIIPYGVMAAAIVYVPETITILDSIQ-FYGENhvSRPYSMVVLIDACKEIGTEVVGSDYDTYYYCQAPEYGKNLLKMGTMRPNLPAIIRLSMGDLCYGAAISSHTMAAKYLpSYLTRLPNGFTPKSHLLKI.YLVLEMEQFKEIVQEMMAK--.GGHEYNDSKNLLSRTTMFNPDHAYTHIIFWRGWSSTYKEFLSQDQLTTFTGRPGVAGDLGVWTFSIPSMFNDGRVYIRYKFFplhAKkr.......ehNSGKGISLYPDLESL........
VSR_RDVF/1-348                  ............MEVDTATFVRLHHELLCAHEGPSIISKFDAIKKVKLgtlaNQSGGANNITEAFFDKLRNFERKSEAYLASDLAEREL.TRDTHKAIVFVTKSVLLGGKSLKDLLPYGVIVCAFIFIPETASVLDNVRVMIGNQ..KRPLTVALIKYMAKSLNCDLVGDSYDTFYYCNSSAYGKNLISVSENDFSNPQRALLSVGDLCYQAARSIHVAAANYI.RIFDRMPPGFQPSKHLFRI.IGVLDMETLKTMVTSNIAREP.GMFSHDNVKDVLHRTGVFSPNHHFSAVILWRGWASTYAYMFNQEQLNMLSGTSGLAGDFGKYKLTYGSTFDEGVIHVQSQFV...TP...........EAVRKRNIYPDLSAL........
C1JAW7_9REOV/1-354              ............MDVESSRVLNLHSGFLEKLAGHEIITKVDAIKRFKI....EGLQGGNNVSVAALEKLRDYANKGEGYVISDIQERTT.GDGVYKSLIFMRRSILSSGKSIKDVLPYGMMVGVLVFLPETAGILDDIPMVISTS..KKPMTICIIHQLAKNLHLDLDSDSYDSFYYCGSSAYGKNLLRINDHLPSIPPKIRLSVGDLAYYAASSLHTAATTYI.RLFDNLPAGFSPRSHLYKV.VGILDMPTFKDVVKTKTKSCD.EQFYYDDVKNVMIRDGVFSADHQYTAVILWRGWASTYMEMLSQEQQSQLQSQNAFAGDLGIHKFTVASKFDEGQVYVQYKFI...TPgmlargaaqrsGSHQGGNLYPSL---sl......
E2E2F2_9REOV/1-354              ............MDVESSRVLNLHSGFLEKLAGHEIITKVDAIKRFKI....EGLQGGNNVSVAALEKLRDYANKGEGYVISDIQERTT.GDGVYKSLIFMRRSILSSGKSIKDVLPYGMMVGVLVFLPETAGILDDIPMVISTS..KKPMTICIIHQLAKNLHLDLDSDSYDSFYYCGSSAYGKNLLRINDHLPSIPPKIRLSVGDLAYYAASSLHTAATTYI.RLFDNLPAGFSPRSHLYKV.VGILDMPTFKDVVKTKTKSCD.EQFYYDDVKNVMIRDGVFSADHQYTAVILWRGWASTYMEMLSQEQQSQLQSQNAFAGDLGIHKFTVASKFDEGQVYVQYKFI...TPgmlargaaqrsGSHQGGNLYPSL---nl......
A5HIX9_RGDV/1-351               ............MDADTERVIKLHVDLIKNHQIYGVLTKFDAIRKLRL....TADGNTNNASRAALSKLQELASSGEAYVVSDLACRTVeTSDIVKAVIFTPHSVISRGKLIKDIIPYGVMAAAIVYVPETITILDSIQ-FYGENhvSRPYSMVVLIDACKEIGTEVVGSDYDTYYYCQAPEYGKNLLKMGTMRPNLPAIVRLSMGDLCYGAAVSSHTMAAKYL.KLFNRLPNGFTPKSHLLKI.YLVLEMDQFKEIVQEMMAK--.GGHEYNDSKNLLSRTTMFNPDHAYTHIIFWRGWSSTYKEFLSQDQLTTFTGRPGVAGDLGVWTFSIPSMFNDGRVYIRYKFFplhAKkr.......ehNSGKGISLYPDLESL........
A2RQI6_9REOV/1-343              ............MDVNTEGFVSLNVKTVVEEKGHEIVMKYDALKRLNL....--RDFESNISTAAMNTVNSFSYKREAWIASDVKERDI.GANTMKAAIFVPGSVLANGMMPKDLVPYGHLVTVLIPVPDIFMLVDNESCLVNTL..RVPISAFICVRILNTLRIEVIGSEYDSYYYCSTSRYGKNLIKMSPSIPASLRDVRVSLNELAVVAFRECHDYVVRIV.KLLTQPPQGFIPKSHVLRInMCYWYGNVRDSWLKQPCQQRPaNTFTYDDRTNVLHRRTMFSASDSFSYSILWRGW-DRYKEFLSQDQVSKFLRYIAPGGPMNTYIMTYPSTFEEGVVYLQYRWW...TP...........YVEQSSCQTPTAPKC........
VSR_RDVO/1-348                  ............MEVDTATFVRLHHELLCAHEGPSIISKFDAIKKVKLgtlaNQSGGANNITEAFLAKLRNFERKSEAYLASDLAEREL.TRDTHKAIVFVTKSVLLGGKSLKDLLPYGVIVCAFIFIPETASVLDNVPVMIGNQ..KRPLTVALIKYIAKSLNCDLVGDSYDTFYYCNSSAYGKNLISVSDNDFSNPQRALLSVGDLCYQAARSLHVAAANYI.RIFDRMPPGFQPSKHLFRI.IGVLDMETLKTMVTSNIAREP.GMFCHDNVKDVLHRIGVYSPNHHFSAVILWRGWASTYAYMFNQEQLNMLSGTSGLAGDFGKYKLTYGSTFDEGVIHVQYQFV...TP...........EVVRKRNIYPDLSAL........
E2E3H0_9REOV/1-354              ............MDVESSRVLNLHSGFLEKLAGHEIITKVDAIKRFKI....EGLQGGNNVSVAALEKLRDYANKGQGYVISDIQERTT.GDGVYKSLIFMRRSILSSGKSIKDVLPYGMMVGVLVFLPETAGILDDIPMVISTS..KKPMTICIIHQLAKNLHLDLDSDSYDSFYYCGSSAYGKNLLRINDHLPSIPPKIRLSVGDLAYYAASSLHTAATTYI.RLFDNLPAGFSPRSHLYKV.VGILDMPTFKDVVKTKTKSCD.EQFYYDDVKNVMIRDGVFSADHQYTAVILWRGWASTYMEMLSQEQQSQLQSQNAFAGDLGIHKFTVASKFDEGQVYVQYKFI...TPgmlargaaqrsGSHQGGNLYPSL---nl......
VSR_WTV/1-347                   ............MDASVDRITNLHFEILAKAGGHEIHQKYEAIRKLNL....TGDSSKSNISVSARSAILKWADAKQGYIASQLDDRDY.GDLIAKAVIFVPMSVITGGKNPKDLIPYGVVAAVLIFVPETLTLLDEI--VINLMhdKKPLSSILLTKILRDMKIDVCGSNFDSFYYCPISRYNRHIIKLAGALPQMPTSVRLSVNDLARVAISEVHNQLISDK.QMFFKLPTGFSPKVHCLKV.LCTTEMEIFQKWVRTFMSDRP.NEFIYSDQFNILSRTTYFSSDDPFSFFTLWRGW-STYKEILSQDQASSFLEAIGSGKPLRSSIATFPSMFDEGAIYIRYEWI...TPkd.......saNSKKAGSSAPSAPKM........
B5G4T6_RGDV/1-351               ............MDADTERVIKLHVDLIKNHQIYGVLTKFDAIRKLRL....TVDGNTNNASRAALSKLQELASSGEAYVVSDLASRTVeTSDIVKAVIFTPHSVISHGKLIKDIIPYGVMAAAIVYVPETITILDSIQ-FYGENhvSRPYSMVVLIDACKEIGTEVVGSDYDTYYYCQAPEYGKNLLKMGTMRPNLPAIVRLSMGDLCYGAAVSSHTMAAKYL.KLFNRLPNGFTPKSHLLKI.YLVLEMDQFKEIVQEMMAK--.GGHEYNDSKNLLSRTAMFNPDHAYTHIIFWRGWSSTYKEFLSQDQLTTFTGRPGVAGDLGVWTFSIPLVFNDGRVYIRYKFFplhAKkr.......ehNSGKGISLYPDLESL........
A5E4G2_LODEL/15-108             ldlsdppaylng------------------------------------....-------------------------------------.-------------------------------------------------------..-----------------------------------------------------------------------------.-------------------.---------------SIAKEKsTIYHSEEKQSFLGQDDALNAAKSYKMVIANQCWSSNYKVFVSQDSFEKFKTFKKTKKEKKSNEITIP---------------...--...........---------------lqsegvgi
VSR_RDVA/1-348                  ............MEVDTATFVRLHHELLCAHEGPSIISKFDAIKKVKLgtlaNQSGGVNNITEAFLAKLRNFERKSEAYLASDLAEREL.TRDTHKAIVFVTKSVLLGGKSLKDLLPYGVIVCAFIFIPETASVLDNVPVMIGNQ..KRPLTVALIKYIAKSLNCDLVGDSYDTFYYCNSSAYGKNLISVSDNDFSNPQRALLSVGDLCYQAARSLHVAAANYI.RIFDRMPPGFQPSKHLFRI.IGVLDMETLKTMVTSNIAREP.GMFCHDNVKDVLHRIGVYSPNHHFSAVILWKGWASTYAYMFNQEQLNMLSGTSGLAGDFGKYKLTYGSTFDEGVIHVQYQFV...TP...........EVVRKRNIYPDLSAL........
Q6Q4H6_RGDV/1-351               ............MDADTERVIKLHVDLIKNHQIYGVLTKFDATRKLRL....TADGNTNNASRAALSKLQELASSGEAYVVSDLASRTVeTSDIVKAVIFTPHSVISRGKLIKDIIPYGVMAAAIVYVPETITILDSIQ-FYGENhvSRPYSMVVLIDACKEIGTEVVGSDYDTYYYCQAPEYGRNLLKMGTMRPNLPAIVRLSMGDLCYGAAVSSHTMAAKYL.KLFNRLPNGFTPKSHLLEI.YLVLEMDQFKEIVQEMMAK--.GGHEYNDSKNLLSRTTMFNPDHAYTHIIFWRGWSSTYKEFLSQDQLTTFTGRPGVAGDLGVWTFSIPSMFNDGRVYIRYKFFplhAKkr.......ehNSGKGISLYPDLESL........
#=GC seq_cons                   ............MDs-TpRllpLHs-llppcpGapIloKaDAI+Kl+L....sssussNNlSpAALsKLpcaAspuEAYlsSDLs-Rsl.ssslhKAlIFss+SVlosGK.lKDllPYGVhsusllalPETholLDsI..hlupp..++PhohsllhphsKslph-llGssYDoaYYCsuStYGKNLl+husthPshPsplRLSlGDLsYhAApShHshAspYl.+lFs+LPsGFoP+SHLh+I.hslL-M-pFKchVpphhA+ps.stFpY-DsKNlLpRsshFSsDHpYotlILWRGWuSTYtEhLSQ-QlophpupsGhAGDLGhaphTlsShF-EGtVYlpY+Fh...TPt........ptsSt+utslYPsL.th........
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