GenomeNet

Database: Pfam
Entry: Phytoreo_Pns
LinkDB: Phytoreo_Pns
Original site: Phytoreo_Pns 
#=GF ID   Phytoreo_Pns
#=GF AC   PF05451.15
#=GF DE   Phytoreovirus nonstructural protein Pns10/11
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_15695 (release 8.0)
#=GF GA   20.00 20.00;
#=GF TC   20.70 21.20;
#=GF NC   18.50 18.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   10949951
#=GF RT   Sequence analysis of Pns11, a nonstructural protein of rice gall
#=GF RT   dwarf virus, and its expression and detection in infected rice
#=GF RT   plants and vector insects. 
#=GF RA   Moriyasu Y, Ishikawa K, Kikuchi A, Imanishi S, Tomita S, Akutsu
#=GF RA   K, Omura T; 
#=GF RL   Virus Genes 2000;20:237-241.
#=GF DR   INTERPRO; IPR008777;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of Phytoreovirus nonstructural proteins
#=GF CC   Pns10 and Pns11. Genome segment S11 of rice gall dwarf virus
#=GF CC   (RGDV), a member of Phytoreovirus encodes a putative protein of
#=GF CC   40 kDa that exhibits approximately 37% homology at the amino
#=GF CC   acid level to the nonstructural proteins Pns10 of rice dwarf and
#=GF CC   wound tumour viruses, which are other members of Phytoreovirus
#=GF CC   [1].
#=GF SQ   4
#=GS VSR_RGDV/1-352           AC Q9JGV3.1
#=GS A0A3N8KFZ3_9BURK/31-108  AC A0A3N8KFZ3.1
#=GS VSR_RDVF/1-348           AC Q85434.1
#=GS C1JAW7_9VIRU/1-356       AC C1JAW7.1
VSR_RGDV/1-352                      ..................MDADTERVIKLHVDLIKNHQVYGVLTKFDAIRKLRL----TADGNSNNASRAALSKLQELASSGEAYVVSDLASRTVETSDIVKAVIFTPHSVISRGKLIKDIIPYGVMAAAIVYVPETITILDSIQFYGENHVSRPYSMVVLIDACKEIGTEVVGSDYDTYYYCQAPEYGKNLLKMGTMRPNLPAIIRLSMGDLCYGAAISSHTMAAKYLPSYLTRLPNGFTPKSHLLKIYLVLEMEQFKEIVQEMMAK--GGHEYNDSKNLLSRTTMFNPDHAYTHIIFWRGWSSTYKEFLSQDQLTTFTGRPGVAGDLGVWTFSIPSMFNDGRVYIRYKFF-PLH.AKKRE..HNSGKGISLYPDLESL.........
A0A3N8KFZ3_9BURK/31-108             svrrhlggiadvylahde--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VANAVAVRLSGAVSRDDAKAIDRRIQKFAHDHCSAGAILWRAWNSSWKWFV---------------------------------------------.-----..----------------vgldwqaqc
VSR_RDVF/1-348                      ..................MEVDTATFVRLHHELLCAHEGPSIISKFDAIKKVKLGTLANQSGGANNITEAFFDKLRNFERKSEAYLASDLAEREL-TRDTHKAIVFVTKSVLLGGKSLKDLLPYGVIVCAFIFIPETASVLDNVRVMIGNQ-KRPLTVALIKYMAKSLNCDLVGDSYDTFYYCNSSAYGKNLISVSENDFSNPQRALLSVGDLCYQAARSIHVAAANYI-RIFDRMPPGFQPSKHLFRIIGVLDMETLKTMVTSNIAREPGMFSHDNVKDVLHRTGVFSPNHHFSAVILWRGWASTYAYMFNQEQLNMLSGTSGLAGDFGKYKLTYGSTFDEGVIHVQSQFVTPEA.VRKR-..-------NIYPDLSAL.........
C1JAW7_9VIRU/1-356                  ..................MDVESSRVLNLHSGFLEKLAGHEIITKVDAIKRFKI----EGLQGGNNVSVAALEKLRDYANKGEGYVISDIQERTT-GDGVYKSLIFMRRSILSSGKSIKDVLPYGMMVGVLVFLPETAGILDDIPMVISTS-KKPMTICIIHQLAKNLHLDLDSDSYDSFYYCGSSAYGKNLLRINDHLPSIPPKIRLSVGDLAYYAASSLHTAATTYI-RLFDNLPAGFSPRSHLYKVVGILDMPTFKDVVKTKTKSCDEQFYYDDVKNVMIRDGVFSADHQYTAVILWRGWASTYMEMLSQEQQSQLQSQNAFAGDLGIHKFTVASKFDEGQVYVQYKFITPGMlARGAAqrSGSHQGGNLYPSLS--lds......
#=GC seq_cons                       ..................M-s-otphlpLH.thlpthts.tlloKhDAI++h+l....pt.tsuNNho.AhhpKLpphtppuEuYlhSDltpRph.spshhKullFh.+Sll.tGK.lKDllPYGhhssshlalPEThslLDsl.hhhtsp.p+Phohsllh.hsKplth-lsussYDoaYYCtustYGKNLlphsp...s.P.hhhLShGDLsY.AA.S.HshAspYl.phhsphPsGFpPppHLh+lhhlL-M.phKplVpshhs+.sGtapaDDsKslhpRsshFusDHpaoulILWRGWuSTYt.hlsQ-Q.s.hpupsuhAGDhGhaphohsShFs-G.lalp.pFh.P.h.s+tt..........slYPsLp...........
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