GenomeNet

Database: Pfam
Entry: Podovirus_Gp16
LinkDB: Podovirus_Gp16
Original site: Podovirus_Gp16 
#=GF ID   Podovirus_Gp16
#=GF AC   PF05894.8
#=GF DE   Podovirus DNA encapsidation protein (Gp16)
#=GF AU   Moxon SJ
#=GF SE   Pfam-B_9825 (release 8.0)
#=GF GA   20.90 20.90;
#=GF TC   26.90 33.70;
#=GF NC   20.30 19.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   3879485
#=GF RT   The complete sequence of Bacillus phage phi 29 gene 16: a
#=GF RT   protein required for the genome encapsidation reaction. 
#=GF RA   Garvey KJ, Saedi MS, Ito J; 
#=GF RL   Gene 1985;40:311-316.
#=GF DR   INTERPRO; IPR008784;
#=GF CC   This family consists of several DNA encapsidation protein (Gp16)
#=GF CC   sequences from the phi-29-like viruses. Gene product 16
#=GF CC   catalyses the in vivo and in vitro genome-encapsidation reaction
#=GF CC   [1]. 
#=GF SQ   48
#=GS Q38007_BPCP1/2-94     AC Q38007.1
#=GS R3NQ03_ENTFL/117-387  AC R3NQ03.1
#=GS M4W6N8_9CAUD/1-337    AC M4W6N8.1
#=GS J0R9E4_BARTA/81-237   AC J0R9E4.1
#=GS J0R9E4_BARTA/3-96     AC J0R9E4.1
#=GS R2I1A0_ENTFL/110-380  AC R2I1A0.1
#=GS R3AB53_ENTFL/110-380  AC R3AB53.1
#=GS VG16_BPPH2/1-331      AC P11014.1
#=GS VG16_BPPZA/1-331      AC P07541.1
#=GS Q9FZV9_BPGA1/1-335    AC Q9FZV9.1
#=GS C2DGS3_ENTFL/110-380  AC C2DGS3.1
#=GS I6P9K5_9CAUD/113-350  AC I6P9K5.1
#=GS E0GIB7_ENTFL/110-380  AC E0GIB7.1
#=GS J9BW73_9ZZZZ/1-52     AC J9BW73.1
#=GS R3XBM6_ENTFL/110-380  AC R3XBM6.1
#=GS R2GIA8_ENTFL/110-380  AC R2GIA8.1
#=GS J0Q249_9RHIZ/1-90     AC J0Q249.1
#=GS S4FZQ5_ENTFL/120-380  AC S4FZQ5.1
#=GS X6RXP3_ENTFL/89-366   AC X6RXP3.1
#=GS R2MR67_ENTFL/110-380  AC R2MR67.1
#=GS R3WSL4_ENTFL/110-380  AC R3WSL4.1
#=GS F0PIJ2_9VIRU/103-380  AC F0PIJ2.1
#=GS S4FA40_ENTFC/127-383  AC S4FA40.1
#=GS I3PV13_9CAUD/47-384   AC I3PV13.1
#=GS VG16_BPB03/1-320      AC Q37897.1
#=GS C7VFW0_ENTFL/113-383  AC C7VFW0.1
#=GS I3PV38_9CAUD/9-346    AC I3PV38.1
#=GS B3VMQ2_BPPH2/1-331    AC B3VMQ2.1
#=GS C7CWH2_ENTFL/113-383  AC C7CWH2.1
#=GS J0Q249_9RHIZ/75-364   AC J0Q249.1
#=GS R5FXH7_9ACTN/60-382   AC R5FXH7.1
#=GS I3PV68_9CAUD/9-346    AC I3PV68.1
#=GS X6QIT0_ENTFL/117-387  AC X6QIT0.1
#=GS R5N6N9_9BACE/14-348   AC R5N6N9.1
#=GS R2MG47_ENTFL/110-380  AC R2MG47.1
#=GS G9J3H3_9CAUD/2-325    AC G9J3H3.1
#=GS E5G064_9VIRU/3-309    AC E5G064.1
#=GS I6P9K5_9CAUD/3-91     AC I6P9K5.1
#=GS R3D2N6_ENTFL/110-380  AC R3D2N6.1
#=GS R3RKJ3_ENTFL/110-380  AC R3RKJ3.1
#=GS R3D9E2_ENTFL/103-380  AC R3D9E2.1
#=GS Q38007_BPCP1/87-358   AC Q38007.1
#=GS B1ABI1_9CAUD/67-235   AC B1ABI1.1
#=GS A6XAE1_9CAUD/1-331    AC A6XAE1.1
#=GS R3MZ45_ENTFL/103-380  AC R3MZ45.1
#=GS R2L1I3_ENTFL/110-380  AC R2L1I3.1
#=GS R3EXL7_ENTFL/108-380  AC R3EXL7.1
#=GS B7SSN7_BPNF/1-331     AC B7SSN7.1
Q38007_BPCP1/2-94                ...............................................eatek-----WYNPQKMLSY..NQYLN.FVIGGRGIGKTFALKKYLFKRFIEKGEQFIYLRRNKSELD.R.I.DKdkFF-----.-..------..----....-....-------....--..-------------..------------------.--...-.-..---------------------...-...--....----------------..-.---------......-..-.-.-...---.-...--..---...--.--..-----.---.-------..-..--------------..-.--..--------.-.-.-...-.-.----.----.-....---------.-..----------------.--------------------------------------------------------ttellkqvftnfevidsdaskihtk.....................................................................
R3NQ03_ENTFL/117-387             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
M4W6N8_9CAUD/1-337               ....................................................MNESLYYNPQQMLSY..NRIMN.FVIASRGIGKTYSMKKYCINRFLKTGAQFIYLRMYKTELK.K.V.DQ..LFNDVSQ.E..FEGHKF..ETKG....K....EFYIDGQ....LA..GFAVPLSAWQSFK..GNSFPNVETILFDEFIRE.KD...N.V..GYPPNCVEALLNIIDTVIRNR...D...NF....RCVCLSNSVSVVNPWF..L.YFNILPEPNgetgkfK..R.F.Y...PYK.H...SV..LEI...PD.GS..SFKEE.RIK.TRFGSMI..S..ELDYGRMSLDNEFT..H.DV..ETFVMRRA.K.T.S...I.H.FCNI.TYKG.F....TMGMWVDTK.S..DFMFLSQDYDPSSRKS.FALSKDDMNENRILVNNYKNEVYLAKMIRAFKKGLLMFDNQIVRQTAYDMFKRMG-v.............................................................................................
J0R9E4_BARTA/81-237              .cefrckgedilynseiyldelekfsqgreeteakistkisyrlpplfkakn---------------..-----.----------------------------------------.-.-.--..-------.-..------..----....-....-----DM....LC..GYLIPLSLVNQYK..HRSFSNVKTIIFDEYICE.Q-...-.G..KYLKNEPEKLISLCETVFRLR...D...DV....RIICLGNSVSHYNPYF..D.FFDLRNHHT......N..E.F.S...FFR.K...KL..ILV...--.--..-----.---.-------..-..--------------..-.--..--------.-.-.-...-.-.----.----.-....---------.-..----------------.--------------------------------------------------------ghtfgk........................................................................................
J0R9E4_BARTA/3-96                ...................................................g-DKELYYDLNKALSY..NALWN.FLDSNRGLGKTFSALRFVCNAYKKRNEQFIYVRRTQKEIQ.H.V.KD..T------.-..------..----....-....-------....--..-------------..------------------.--...-.-..---------------------...-...--....----------------..-.---------......-..-.-.-...---.-...--..---...--.--..-----.---.-------..-..--------------..-.--..--------.-.-.-...-.-.----.----.-....---------.-..----------------.--------------------------------------------------------mfialekegiikpcefrckgedilynsei.................................................................
R2I1A0_ENTFL/110-380             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
R3AB53_ENTFL/110-380             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
VG16_BPPH2/1-331                 ....................................................MDKSLFYNPQKMLSY..DRILN.FVIGARGIGKSYAMKVYPINRFIKYGEQFIYVRRYKPELA.K.V.SN..YFNDVAQ.E..FPDHEL..VVKG....R....RFYIDGK....LA..GWAIPLSVWQSEK..SNAYPNVSTIVFDEFIRE.KD...N.S..NYIPNEVSALLNLMDTVFRNR...E...RV....RCICLSNAVSVVNPYF..L.FFNLVPDVN......K..R.F.N...VYD.D...AL..IEI...PD.SL..DFSSE.RRK.TRFGRLI..D..GTEYGEMSLDNQFI..G.DS..QVFIEKRS.K.D.S...K.F.VFSI.VYNG.F....TLGVWVDVN.Q..GLMYIDTAHDPSTKNV.YTLTTDDLNENMMLITNYKNNYHLRKLASAFMNGYLRFDNQVIRNIAYELFRKMRI..............................................................................................
VG16_BPPZA/1-331                 ....................................................MDKSLFYNPQKMLSY..DRILN.FVIGARGIGKSYAMKVYPINRFIKYGEQFIYVRRYKPELA.K.V.SN..YFNDVAQ.E..FPDHEL..VVKG....R....RFYIDGK....LA..GWAIPLSVWQSEK..SNAYPNVSTIVFDEFIRE.KD...N.S..NYIPNEVSALLNLMDTVFRNR...E...RV....RCICLSNAVSVVNPYF..L.FFNLVPDVN......K..R.F.N...VYD.D...AL..IEI...PD.SL..DFSSE.RRK.TRFGRLI..D..GTEYGEMSLDNQFI..G.DS..HVFIEKRS.K.D.S...K.F.VFSI.VYNG.F....TLGVWVDVN.Q..GLMYVDTAHDPSTKNV.YTLTTDDLNENMMLITNYKNNYHLRKLASAFMNGYLRFDNQVIRNIAYELFRKMRI..............................................................................................
Q9FZV9_BPGA1/1-335               ....................................................MDEKLFWKPQKLLSY..SRILS.CVIGARGVGKSFAIKSKLVDDFLKNGRQFVYLRMYKTEIS.K.NkSK..FFDDIAI.N..YPNTKF..EVKG....N....DFYINGK....LA..GYAIPLSGWQALK..SSSYPNVYTIFFDEFVRE.KD...L.T..GYPPNVVDSLLNVMDTVFRHR...VndpAV....RVICACNAVTLVNPYF..L.YFGFYPNPN......Q..E.F.S...KND.S...IV..VQI...VK.NE..DYANA.RRD.NRFGKLI..S..GTAYEEMSIDNKFT..Q.DS..DLFVQKRS.K.N.S...Q.F.NFGI.RYGG.K....NYGVWVDRE.Q..MLMYLSEAYDPKSNQI.FALTSDDLTEKNVLVGGWRGNYKLTKLVSAFKKGMLRFENQVVRKHGYDILKQMRI..............................................................................................
C2DGS3_ENTFL/110-380             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
I6P9K5_9CAUD/113-350             .............................................ntnkwqt---------------..-----.----------------------------------------.-.-.--..-------.-..------..----....-....-------....-I..GWYGPLSMFNRIK..SIEYTNVKKILYDEFLIEaNS...N.Q..RYLKNEPILLINLYDSIARLT...P...DV....KLVLMANATSLYNPYF..E.AFGIDPDMT......K..E.Y.G...LYK.D...DS..ILV...HF.AP..DKVRDiDDG.SAFSRLV..K..GTEYEDYALNNNFT..N.NT..QDFVRPLK.T.T.S...I.F.KWSI.ILEG.K....VYGVWKERN.E..PIFIVSD-KYNNTGIT.LALTWEDAHDAD--YTSPKAQAYTRLIANAKDN-RLYFSSPVI-------------rekfrg........................................................................................
E0GIB7_ENTFL/110-380             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
J9BW73_9ZZZZ/1-52                ...................................................m-----YFSPEKTKSH..NALFN.YIIGIRGCGKTYSTLKWCVERYLKTGERFIYLRR------.-.-.--..-------.-..------..----....-....-------....--..-------------..------------------.--...-.-..---------------------...-...--....----------------..-.---------......-..-.-.-...---.-...--..---...--.--..-----.---.-------..-..--------------..-.--..--------.-.-.-...-.-.----.----.-....---------.-..----------------.--------------------------------------------------------se............................................................................................
R3XBM6_ENTFL/110-380             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
R2GIA8_ENTFL/110-380             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
J0Q249_9RHIZ/1-90                ....................................................----MYYDLNKALSY..NALWN.FLDSNRGLGKTFSALRFVCNAYKKRNEQFIYVRRTQKEIQ.R.V.KD..-------.-..------..----....-....-------....--..-------------..------------------.--...-.-..---------------------...-...--....----------------..-.---------......-..-.-.-...---.-...--..---...--.--..-----.---.-------..-..--------------..-.--..--------.-.-.-...-.-.----.----.-....---------.-..----------------.--------------------------------------------------------amfialekqgiikpcefrckgehilynsei................................................................
S4FZQ5_ENTFL/120-380             .....................eyqgsseepreillvfrnkelkkdkkciklg---------------..-----.----------------------------------------.-.-.--..-------.-..------..----....-....-------....--..-YLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
X6RXP3_ENTFL/89-366              .....................fldklpeevkkqyevfveyqgsseepreill---------------..-----.----------------------------------------.-.-.--..-------.-..------..VFRN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
R2MR67_ENTFL/110-380             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
R3WSL4_ENTFL/110-380             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
F0PIJ2_9VIRU/103-380             .....................fldklpeevkkqyevfveyqgsseepreill---------------..-----.----------------------------------------.-.-.--..-------.-..------..VFRN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
S4FA40_ENTFC/127-383             ........................egvrdilfvfkdkmnkknrkririgyis---------------..-----.----------------------------------------.-.-.--..-------.-..------..----....-....-------....--..----AISAAEKIR..GPGMPYVKLIILDEFQA-.KK...L.W..NYLPDEPVELEDIYDSIARNRagtE...DC....KLFALGNSGSILNPYF..A.YYDYDEFNE......V..K.T.E...KKN.G...SI..I--...FY.HL..ENEA-.KRN.QLYKDSI..S..GTAYGDYAQRNQYP..D.NDnfNVLKLKHA.K.S.P..rQ.L.LYNI.KLDN.I....VLGVWKDGE.D..HLI-------------.--------------------------------------------------------isrlidrekrtfvdkipsgseildlqifyiittqlknkqiyfdapdlrlivekymrkymfk.................................
I3PV13_9CAUD/47-384              ...................................................v-NKNVYYSMDKLMSY..NAVYS.FVLGERGNGKTYQGKKKMINLFLKHGKQSIYVRRTQTEID.E.V.KD.tVFNDIAK.D..YPGINI..EVKG....Y....QGFIDGQ....CF..CYFIALSTSSKKK..SSSFPDVDFIFFDEYIIT.KT...GkN..DYLKNEMILLNDLVETVFRTR...D...PH....VYIC-ANAVSYVNPFF..E.FFEIEPTKT......D..K.F.I..tIKD.Eg.dVLlcVEI...TD.TQ..EYREM.KKK.TKFARLL..K..GSTYSSYAFDNNTL..E.DT..NDFIVPNKpL.G.F...N.YyRGAF.RIGE.R....IIGAWSEGAtD..TGVWLGDKYLKENRWN.YTILSNNNYTGWRNIKADRNHWNIKYIKKCFLNGDVYYMNQSTKKMFVE-------evsky.........................................................................................
VG16_BPB03/1-320                 ....................................................-----------MLSY..DRILN.FVIGARGIGKSYAMKKHPIKRFIKHGEQFIYVRRYKPELK.K.I.GN..YFNDIAQ.E..FPNHEF..KVKG....R....QFCIDGK....LT..GWAIPLSAWQSEK..SNAYPMVTTIIFDEFIRE.RD...N.S..GYIPNEVDALLNLMDTVFRTR...E...NG....RCICLSNAVSIINPYF..V.YFGLVPDIN......K..R.F.N...AYK.H...IL..IEI...PD.SK..DFSDE.RRK.TKFGQLI..D..GTEYGEMSLDNEFV..N.DS..DVFIEKRS.K.N.S...K.F.VFSI.VYKG.M....RMGVWVDTQ.Q..MLLYLTTDHDPSTKNV.YALTADDLEEGMILVSNYKKNYHIRKLCSAFMNGQLRFDNQLMRTIGYEMFKKMRV..............................................................................................
C7VFW0_ENTFL/113-383             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
I3PV38_9CAUD/9-346               ...................................................v-NKNVYYSMDKLMSY..NAVYS.FVLGERGNGKTYQGKKKMINLFLKHGKQSIYVRRTQTEID.E.V.KD.tVFNDIAK.D..YPGINI..EVKG....Y....QGFIDGQ....CF..CYFIALSTSSKKK..SSSFPDVDFIFFDEYIIT.KT...GkN..DYLKNEMILLNDLVETVFRTR...D...PH....VYIC-ANAVSYVNPFF..E.FFEIEPTKT......D..K.F.I..tIKD.Eg.dVLlcVEI...TD.TQ..EYREM.KKK.TKFARLL..K..GSTYSSYAFDNNTL..E.DT..NDFIVPNKpL.G.F...N.YyRGAF.RIGE.R....IIGAWSEGAtD..TGVWLGDKYLKENRWN.YTILSNNNYTGWRNIKADRNHWNIKYIKKCFLNGDVYYMNQSTKKMFVE-------evsky.........................................................................................
B3VMQ2_BPPH2/1-331               ....................................................MDKSLFYNPQKMLSY..DRILN.FVIGARGIGKSYAMKVYPINRFIKYGEQFIYVRRYKPELA.K.V.SN..YFNDVAQ.E..FPDHEL..VVKG....R....RFYIDGK....LA..GWAIPLSVWQSEK..SNAYPNVSTIVFDEFIRE.KD...N.S..NYIPNEVSALLNLMDTVFRNR...E...RV....RCICLSNAVSVVNPYF..L.FFNLVPDVN......K..R.F.N...VYD.D...AL..IEI...PD.SL..DFSSE.RRK.TRFGRLI..D..GTEYGEMSLDNQFI..G.DS..QVFIEKRS.K.D.S...K.F.VFSI.VYNG.F....TLGVWVDVN.Q..GLMYIDTAHDPSTKNV.YTLTTDDLNENMMLITNYKNNYHLRKLASAFMNGYLRFDNQVIRNIAYELFRKMRI..............................................................................................
C7CWH2_ENTFL/113-383             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
J0Q249_9RHIZ/75-364              cefrckgehilynseiyldelekfsqgreeteakistkisyrlpplfkaknd---------------..-----.----------------------------------------.-.-.--..-------.-..------..----....-....------M....LC..GYLISLSLANQYK..HCSFPNVKTIIFDEYICE.Q-...-.G..KYLKNEPEKLISLCETVFRLR...D...DV....RVICLGNSVSHYNPYF..D.FFDLRNHHT......N..E.F.S...FFR.K...KL..ILV...GH.TFgkEFVEK.KVQ.TKFAKSI..K..ETAYGSFVLDNNALktN.DD..YSFIDKMK.S.I.P...KtP.YFNL.IIQS.Q....KLAVFFASD.K..--LFIKKGF---NKDY.ITYSMDNILYEGAIKGSISKDHKLKQLAKFIRDGDVCFETMDVKR-----------vmesfikkv.....................................................................................
R5FXH7_9ACTN/60-382              .................................................imk-----YYSLRKCLSY..NRYLN.ILIGGRGIGKTYQLKKYVIEQYIKSKKQFVWLRRYKTEIK.E.A.TD.gFFTKHKN.N..YPDHKF..EIKG....K....TAYIDGE....QA..GRFIALTNADILK.gSDDFSAVTTIVYDEFIID.NK...S.SfrRYLPNELRIFTDLQETIFRTR...Q...DG....KVFMLANALSMVNPYC..L.AFGIKFNYT......P..L.F.KndlIYA.E...ML..-ST...TN.EL..AFAKA.T--.TPQNKLAtkY..LPEYNDYANNESFL..N.DD..YSQIERKP.K.D.S...I.Q.LFNI.KTNN.N....IIYFFFASS.S..QALYACQSGDPKTNP-.--------------------------------------------------------ftvnkiaesnrphagaeikkiksfavagrlffenlqiksevekli.................................................
I3PV68_9CAUD/9-346               ...................................................v-NKNVYYSMDKLMSY..NAVYN.FVLGERGNGKTYQGKKKMINLFLKRGKQSIYVRRTQTEID.E.V.KD.tLFNDIAK.D..YPGISI..EVKG....Y....QGFIDGQ....CF..CYFIALSTSSKKK..SSSYPDVEFIFFDEYIIT.KT..gK.N..NYLKNEMILLNDLVETVFRTR...D...AH....VYIC-ANAVSYVNPFF..E.FFNIEPKKG......D..D.F.I...TIK.DegdVLlcVEI...TD.TQ..EYREM.KKK.TKFARLL..K..GSAYSSYAFDNNTL..E.DT..NDFIVPNK.PlGfN...Y.Y.RGAF.RIGD.R....ILGAWSEGAtD..TGVWLGDKYLKENRWN.YTILSNNNYAGWRNIKADRNHWNIKYIKKCFLNGDVYYMNQTTKKMFVE-------eiskf.........................................................................................
X6QIT0_ENTFL/117-387             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
R5N6N9_9BACE/14-348              .........................................kdldgntpdif---------------..-----.IITGSKGGGKSFAVKEYLINEFLHKSKKFICLVRKKDELN.SyI.PA..FWADVKN.K..FPNTDLysVSSG....SgkfaEVFIKTEdfeiSC..GYVIALSMVDKVKriSTFFNDADNIFLDEFQSE.--...T.G..DYCADEITKFFAINDAVGRGF...E...QLtrklTYFLVSNMVSLLNPYF..V.ALGIHKRWQ......SgiH.F.M...RGH.G...WV..MEV...YR.NK..YVAEE.KQQ.SGFYRAF..S..DASYFNYSIDNIFL..L.DN..VQFIAKQNlA.G.A...R.Y.LMTI.KHNG.I....FYGLWM-LQ.N..GRYYISLKADRNFHRL.FAISTKDHDENTCLTGAISAQVSMC--RKQFNAGNFRFESQECKNIGMDF------lgir..........................................................................................
R2MG47_ENTFL/110-380             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
G9J3H3_9CAUD/2-325               .....................................skffeikefieeypn---------------..-HLIH.CVIGARGVGKSYSTKRLIIEEFLEYGKQALILRRYKNQAE.SmA.TT..YFTDVLQkE..FPTVEY..ELKG....D....MGFINGE....PF..CLFTGLNGNSLAK..GSSFPNVYYIVYEEVMPE.PG...-.E..KIIKDEYKKLESIIVTVDRFE...D...RI....EVICVGNNTSYYNPIF..D.TLKLYPSTK......P..N.R.V...V-K.N...EL..MAIktlET.PK..EFKEY.ALN.SKVGKLT..V..MSGSSRYNIDNENI..S.ND..R-------.-.-.-...-.-.----.----.-....---------.-..----------------.--------------------------------------------------------fnvcskkelwdtdklepvfkvrvdvdkvikiwkcqsdtmfyywvdnhnkgkcdeyfldldyqtdenkhislcnkglinrinfnnkvgavffnna
E5G064_9VIRU/3-309               ...............................................ltekm---------------..-----.------------------IDDFLEYGAQSVVLRRLKTQTD.E.M.QE.tYFDKLLE.SgaYDGYTF..KRVH....N....KMYIDGK....LF..CTFLALNGSGVGR..GGSYGKVMNIVVEEIMPE.PG...E.-..HKVKREYQKLESFLATVDRFE...D...RI....KVFCVGNNTGYYSPIF..D.ALKLYPTLK......E..EgY.T...SNE.V...AV..IQK...AQsSN..EFKET.VRK.TKLGRLM..E..ITGTAKYNIDNENI..SnDT..FNCVNKKElK.E.TnklK.L.KFRVrVDKD.K....VITIWECQG.KevSYYYVDNATKGLTQE-.YFFDFEYQKGNNKHITQL-NPYTIKELELNNKLGYIYFNNP---------------etkylfnqinlffk................................................................................
I6P9K5_9CAUD/3-91                ................................................nkdi----KFYNVTKTLSLysDKVLMyMVIGARGVGKSYSTKKHFLNRYFKTGERFFYARRYADDIQvA.V.RG..FFDKVIA.D..NPK---..----....-....-------....--..-------------..------------------.--...-.-..---------------------...-...--....----------------..-.---------......-..-.-.-...---.-...--..---...--.--..-----.---.-------..-..--------------..-.--..--------.-.-.-...-.-.----.----.-....---------.-..----------------.--------------------------------------------------------wqkyefrekg....................................................................................
R3D2N6_ENTFL/110-380             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
R3RKJ3_ENTFL/110-380             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
R3D9E2_ENTFL/103-380             .....................fldklpeevkkqyevfveyqgsseepreill---------------..-----.----------------------------------------.-.-.--..-------.-..------..VFRN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
Q38007_BPCP1/87-358              ..................................daskihtkiifradnmee---------------..-----.----------------------------------------.-.-.--..-------.-..-EENIL..VLSS....T....KIILNGK....IV..CYLKSLSTWVDLK..GSEYDEVMSILYDEVLIDvTS...K.K..RYLDNEVEALLNFIFSVFRRR...D...GC....HAYLLSNASNFNNPYF..A.FLKFYDDNG......K..R.FyN...LKQyA...TL..IEF...PP.HS..AFQTE.EEKeSGFFKLL..S..KSSIYESVANNEFQ..I.KN..DKNIAKIK.G.L.K...S.R.LYSF.YCDGtF....LTGYYID--.-..NMVYIAKGFDKNL-TA.YCLEVEQVEDGFVY------------------------------------------lnkasalgktlrslylknmfiyedletknkfievinh.........................................................
B1ABI1_9CAUD/67-235              .................nnfiteemlrvyfgnrfsdfnadeskqimrfsidg---------------..-----.----------------------------------------.-.-.--..-------.-..-AIHEI..KAIR....N....KIFFDDR....CI..VYFIALSRAGHVK..SNNYPDVKYLVFDEVIID.RSimpN.A..RYIRNEFTVLLNLIETIKRKR...E...DF....YLFMLSNVGENFNPIFagLgYYLTHEDIK......K..G.F.V...KRE.D...YC..---...--.--..-----.---.-------..-..--------------..-.--..--------.-.-.-...-.-.----.----.-....---------.-..----------------.--------------------------------------------------------vqfvenkqeelnmt................................................................................
A6XAE1_9CAUD/1-331               .................................................mkk--KFSYYSFSKVLSY..AGVFN.MIMGARGLGKTYGAKKIVIKNAINKGQQFIYLRRYKTELK.G.R.NS..FFADIQH.E..FPDEEF..RVEGqfaqR....KVEKKWE....TI..GYFIPLSTAQANK..SIAYPNVYTIIFDEFIID.KG...S.L..RYLPDEAKVFMDFYSTVDRYQ...D...RV....RCLMLSNAVSIMNPYF..I.RFHIEPKEG......I..S.R.H...AEG.F...IV..TDF...VN.SE..QFQSE.VAH.TRFGSFI..TnyAEDYADYSISNKFA..D.NY..DDFVMRKT.G.K.A...K.Y.AFSL.RCPD.G....EVSIWIDG-.-..GTW-FAQRRQPRGDRVrWAYKVSDLREGERLLMY-G-DKVLSIMRSTYRKGRLFSDSPETRNMFAEIF-----vr............................................................................................
R3MZ45_ENTFL/103-380             .....................fldklpeevkkqyevfveyqgsseepreill---------------..-----.----------------------------------------.-.-.--..-------.-..------..VFRN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
R2L1I3_ENTFL/110-380             ..........................evkkqyevfveyqgsseepreillvf---------------..-----.----------------------------------------.-.-.--..-------.-..------..--RN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.Y..K-ILISRVSDPDKLD-.--------------------------------------------------------ivdrtpieeqvldqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi..............................................
R3EXL7_ENTFL/108-380             ..........................peevkkqyevfveyqgsseepreill---------------..-----.----------------------------------------.-.-.--..-------.-..------..VFRN....K....ELKKDKK....CIklGYLGAVSMAEKFR..GPGLPKVKVILLDEFQ-S.KK...N.W..DYLPNEPVELEDIYESVGRLRcgtG...DI....KVIALGNSGTILNPYF..D.YYGYDEFTE.....vK..T.V.K...REG.E...VL.fYHL...PN.KA..-----.KRS.EQSKNLF..K..GSAYGKYSLDNDF-..A.DN..QLFNVIRL.K.E.A...K.A.PRKC.LYNI.FfgetYIGVWRTGD.H..K-ILISRVSDPDKLDI.--------------------------------------------------------vdrtpieeqvidqqvyrvlsdklqnkqlyfdspelrliaekhlrkyi...............................................
B7SSN7_BPNF/1-331                ....................................................MKESLYYDPNKMLSY..DRILN.FIIGARGIGKSYAMKKHPIKRFIKYGEQFIYVRRYKPELK.K.I.GN..YFNDIAQ.E..FPNHEF..KVKG....R....QFFIDGK....LA..GWAIPLSAWQSEK..SNAYPMVTTIVFDEFIRE.RD...N.S..GYIPNEVDALLNLMDTVFRTR...E...NG....RCICLSNAVSVINPYF..V.YFGLVPDIN......K..R.F.N...AYK.H...IL..IEI...PD.SK..DFSDE.RRK.TKFGQLI..D..GTEYGEMSLDNEFV..N.DS..DVFIEKRS.K.N.S...K.F.VFSI.VYKG.M....RMGVWVDAQ.Q..MLLYLTTDYDPSTKNV.YALTADDLEEDMILVSNYKKNYHIRKLCSAFMNGQLRFDNQLMRTIGYEMFKKMRV..............................................................................................
#=GC seq_cons                    .................................................h.h.............................................................................................+s....+....chhhDtK....hh..GYhhAlShup+h+..usuhPcVcsIlhDEF..s.Kc...N.h..cYLPNEsspLpslhEoVtRhR...s...cl....+lIsLuNusollNPYF..-.aashc.hsp......K..p.h.p...tps.-...lL..hcl...Ps.pt........+Rp.pp.tpLh..c..GouYGcYSLDNcF...s.Ds..plF.shRh.K.p.u...K.h.shph.lYsh.h....hlGVWhsus....p.lhlucspDPsphs..........................................................lscpt.hctth.......h...........................................................................
//
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