GenomeNet

Database: Pfam
Entry: Polyoma_lg_T_C
LinkDB: Polyoma_lg_T_C
Original site: Polyoma_lg_T_C 
#=GF ID   Polyoma_lg_T_C
#=GF AC   PF06431.10
#=GF DE   Polyomavirus large T antigen C-terminus
#=GF AU   Moxon SJ
#=GF SE   Pfam-B_214 (release 10.0)
#=GF GA   22.40 22.40;
#=GF TC   23.00 24.30;
#=GF NC   21.10 22.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 26740544 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR010932;
#=GF DR   SCOP; 1n25; fa;
#=GF SQ   3
#=GS LT_SV40/265-699          AC P03070.2
#=GS LT_SV40/265-699          DR PDB; 4E2I K; 266-627;
#=GS LT_SV40/265-699          DR PDB; 4GDF A; 265-627;
#=GS LT_SV40/265-699          DR PDB; 2H1L H; 266-627;
#=GS LT_SV40/265-699          DR PDB; 2H1L G; 266-627;
#=GS LT_SV40/265-699          DR PDB; 4E2I L; 266-627;
#=GS LT_SV40/265-699          DR PDB; 2H1L D; 266-627;
#=GS LT_SV40/265-699          DR PDB; 1SVO A; 266-627;
#=GS LT_SV40/265-699          DR PDB; 2H1L E; 266-627;
#=GS LT_SV40/265-699          DR PDB; 1SVM E; 266-627;
#=GS LT_SV40/265-699          DR PDB; 1SVO B; 266-627;
#=GS LT_SV40/265-699          DR PDB; 2H1L L; 265-627;
#=GS LT_SV40/265-699          DR PDB; 4E2I A; 266-627;
#=GS LT_SV40/265-699          DR PDB; 1SVL B; 266-627;
#=GS LT_SV40/265-699          DR PDB; 2H1L I; 265-627;
#=GS LT_SV40/265-699          DR PDB; 4E2I E; 266-627;
#=GS LT_SV40/265-699          DR PDB; 4GDF F; 265-627;
#=GS LT_SV40/265-699          DR PDB; 4E2I B; 266-627;
#=GS LT_SV40/265-699          DR PDB; 1N25 A; 266-627;
#=GS LT_SV40/265-699          DR PDB; 2H1L J; 266-627;
#=GS LT_SV40/265-699          DR PDB; 1N25 B; 266-627;
#=GS LT_SV40/265-699          DR PDB; 4E2I F; 266-627;
#=GS LT_SV40/265-699          DR PDB; 2H1L B; 266-627;
#=GS LT_SV40/265-699          DR PDB; 2H1L K; 266-627;
#=GS LT_SV40/265-699          DR PDB; 4GDF B; 265-627;
#=GS LT_SV40/265-699          DR PDB; 2H1L F; 265-627;
#=GS LT_SV40/265-699          DR PDB; 4E2I C; 266-627;
#=GS LT_SV40/265-699          DR PDB; 4E2I D; 266-627;
#=GS LT_SV40/265-699          DR PDB; 1SVL C; 266-627;
#=GS LT_SV40/265-699          DR PDB; 1SVM B; 266-627;
#=GS LT_SV40/265-699          DR PDB; 4GDF E; 265-627;
#=GS LT_SV40/265-699          DR PDB; 1SVM A; 266-627;
#=GS LT_SV40/265-699          DR PDB; 4E2I J; 266-627;
#=GS LT_SV40/265-699          DR PDB; 4E2I G; 266-627;
#=GS LT_SV40/265-699          DR PDB; 2H1L C; 265-627;
#=GS LT_SV40/265-699          DR PDB; 4E2I H; 266-627;
#=GS LT_SV40/265-699          DR PDB; 1SVM C; 265-627;
#=GS LT_SV40/265-699          DR PDB; 4E2I I; 266-627;
#=GS LT_SV40/265-699          DR PDB; 1SVM D; 266-627;
#=GS LT_SV40/265-699          DR PDB; 2H1L A; 266-627;
#=GS LT_SV40/265-699          DR PDB; 1SVM F; 265-627;
#=GS LT_SV40/265-699          DR PDB; 1SVL A; 265-627;
#=GS H1BQQ9_9FIRM/223-318     AC H1BQQ9.1
#=GS A0A0X1T4A8_PSEAA/25-161  AC A0A0X1T4A8.1
LT_SV40/265-699                     ..................TKQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLKCIKKEQP...SHYKYHEKHYANAAIFADSKNQKTICQQAVDTVLAKKRVDSLQLTR.EQMLTNRFNDLLD.RMDIMFGSTGSADIEEWMAGVAWLHCLLPKMDSVVYDFLKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNEFSVPKTLQARFVKQIDFRAKDYLKHCLERSEFLLEKRIIQSGIALLLMLIWYRPVAEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGIGVLDWLRNSDDDDEDSQENADKNEDGGEKNMEDsgHETGIDSQSQGSFQAPQSSQSVH--dhnqpyhicrgftcfkkp....
#=GR LT_SV40/265-699          SS    ..................--S--HHHHHHHHHHHT---HHHHHHHHHGGSS-STT-HHHHTT--H...HHHTTHHHHHHHHHHHTT-STHHHHHHHHHHHHHHHHHHHHHHS-H.HHHHHHHHHHHHH.HHHHHTSSSSSS-HHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHTBTTB-EEEEE-STTSSHHHHHHHHHHHH-EEEE-TSS-TTTHHHHHGGGTT-SEEEEEEE-BSSCTTTTS-B-SHHHHHHTTHHHHH-SS-EEEESSSSEEEEE----EEEEESS-B--HHHHTTEEEEEE----HHHHHHHHTTTHHHHTT-TTSHHHHHHHHHHHS-GGGS-TTTHHHHHHHHHHHHHHS-HHHHHHHHHHHHHTS-TT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXX....
H1BQQ9_9FIRM/223-318                ...........rklqrem-----------------------------------------------...---------------------------------VLKKLLNGYHVTQ.GELLANRYLSLLDiGMQFIFHRRNTHTVHYWRACAAWEVT-LKQHVFIIFFMLFSVVYGIVQKTYLMFLGTV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..-------------------------cgmll.................
A0A0X1T4A8_PSEAA/25-161             ekeaelkytyiaslkkah----------------------------ENYNSKFEICIKNEKLKTPlkiSDIEFLKKQYAQTMIFIEKKHRLSTCIYPEENIVIRKHIETLSLLRsEKILPTEEETLTQ.TIDIYFGLENKHDLE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..-------------------------fkkkyelipeelrkrfdrvvkd
#=GC SS_cons                        ..................--S--HHHHHHHHHHHT---HHHHHHHHHGGSS-STT-HHHHTT--H...HHHTTHHHHHHHHHHHTT-STHHHHHHHHHHHHHHHHHHHHHHS-H.HHHHHHHHHHHHH.HHHHHTSSSSSS-HHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHTBTTB-EEEEE-STTSSHHHHHHHHHHHH-EEEE-TSS-TTTHHHHHGGGTT-SEEEEEEE-BSSCTTTTS-B-SHHHHHHTTHHHHH-SS-EEEESSSSEEEEE----EEEEESS-B--HHHHTTEEEEEE----HHHHHHHHTTTHHHHTT-TTSHHHHHHHHHHHS-GGGS-TTTHHHHHHHHHHHHHHS-HHHHHHHHHHHHHTS-TT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXX....
#=GC seq_cons                       ...........tpLp+th.............................pap.pFEhClKs.KhcpP...SchcahcKpYApshIFh-pKpphohC..s.-slVlKK+l-oLpLTR.EclLsNRapoLLD.sMDIhFGpcNoHDlE.WhAssAW.hs.L.phs.lla.hLhshVYsIspKpYhhFhGsl...............................................................................................................................................................................................................................................................s+pph.hIscthpphhc.....
//
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