GenomeNet

Database: Pfam
Entry: Pput2613-deam
LinkDB: Pput2613-deam
Original site: Pput2613-deam 
#=GF ID   Pput2613-deam
#=GF AC   PF14427.1
#=GF DE   Pput_2613-like deaminase
#=GF PI   Pput2613-DEAM;
#=GF AU   Iyer LM, Zhang D, Aravind L
#=GF SE   Manual
#=GF GA   25.00 25.00;
#=GF TC   28.40 54.70;
#=GF NC   22.70 17.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   21890906
#=GF RT   Evolution of the deaminase fold and multiple origins of
#=GF RT   eukaryotic editing and mutagenic nucleic acid deaminases from
#=GF RT   bacterial toxin systems.
#=GF RA   Iyer LM, Zhang D, Rogozin IB, Aravind L;
#=GF RL   Nucleic Acids Res. 2011; [Epub ahead of print]
#=GF CC   A member of the nucleic acid/nucleotide deaminase superfamily 
#=GF CC   prototyped by Pseudomonas Pput_2613 [1]. Members of this family
#=GF CC   are predicted to function as toxins in bacterial polymorphic
#=GF CC   toxin  systems  [1].
#=GF SQ   6
#=GS G1VD22_9BACT/455-562      AC G1VD22.1
#=GS Q1IFR6_PSEE4/1444-1560    AC Q1IFR6.1
#=GS E8UEW4_TAYEM/1942-2060    AC E8UEW4.1
#=GS A6CFF1_9PLAN/10471-10587  AC A6CFF1.1
#=GS A5W3N8_PSEP1/740-859      AC A5W3N8.1
#=GS G1VHA1_9BACT/408-525      AC G1VHA1.1
G1VD22_9BACT/455-562                 gla--.------.HTAVWS-HMRGGVRIDSGSVI..SGCDIKPGRRLTFPEQ-LATHTERKILNKLADNVQK..GDVILIKGTRPPCNpghrGCQYAMQQFADKNDVTIIYSD----G..KEKWKFK------khh.....
Q1IFR6_PSEE4/1444-1560               ...KF.GSGKGV.HTAVVNVHDSDGEHTVVSCIL.hSGNMTEEERALGFPRSSLATHTEARAVKQIPLQQ--..GDVMVIDGQYPPCP....SCKGKMNRASTETGAKIQYTWPENGE..TKTWTAGQKRRRR........
E8UEW4_TAYEM/1942-2060               ..k-FsNGKRRPpHKATVTVTDKNGVVKHKSNLV..SGNMTEAEKKLGFPNNSLATHTENRATRLIDLNQ--..GDTMLIEGQYRPCP....RCKGAMRVKAEESGAKVIYTWPEDGDlkKREW-EGTPCDKK........
A6CFF1_9PLAN/10471-10587             ...NY.ASSEG-.HYAEWELRDPSGKLIARDIET..SGTDFSNPGKLTFPEQSWYAHTEGKIISDLYDSNLLqpGRFLNIDGILAPCS....HCRGIMRWASQKFNMTIQYLGENG--..ATIYKNGKIHDPN........
A5W3N8_PSEP1/740-859                 ...SF.GSGKGT.HNAIATLYDSSGNVKATGIWQ..SGNMTPDEAALGFPKSTLATHTEARITRELSPQAVP..GDRLVIEGEYPPCN....SCKGKMNAFKGSTGADVEYRWASGDGttTEVWNAKSKRTQK........
G1VHA1_9BACT/408-525                 ..l-F.GSGKGT.HTATINIYNSDGGLKPESPISikSGDMTDAERSLGFPQSTLATHTEARSVKRYPLTD--..GERMEIIGQYPPCN....SCRGKMRRATE-SGGIIDYKWINDKT.gNQEWI--------ryegnkkq
#=GC seq_cons                        ....F.uSu+Gs.HsAshslaDssGslpspuslh..SGsMTcsE+pLGFPcsoLATHTEuRhl+cls.ss....GDhhlI-GpYPPCs....uC+GtMpttupcoGupIpYpW.psts..scpWpttp.pp.p........
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