GenomeNet

Database: Pfam
Entry: QH-AmDH_gamma
LinkDB: QH-AmDH_gamma
Original site: QH-AmDH_gamma 
#=GF ID   QH-AmDH_gamma
#=GF AC   PF08992.8
#=GF DE   Quinohemoprotein amine dehydrogenase, gamma subunit
#=GF AU   Mistry J, Sammut SJ
#=GF SE   pdb_1jmx
#=GF GA   25.00 25.00;
#=GF TC   68.50 68.20;
#=GF NC   22.20 17.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   11704672
#=GF RT   Crystal structure of quinohemoprotein amine dehydrogenase from
#=GF RT   Pseudomonas putida. Identification of a novel quinone cofactor
#=GF RT   encaged by multiple thioether cross-bridges. 
#=GF RA   Satoh A, Kim JK, Miyahara I, Devreese B, Vandenberghe I,
#=GF RA   Hacisalihoglu A, Okajima T, Kuroda S, Adachi O, Duine JA, Van
#=GF RA   Beeumen J, Tanizawa K, Hirotsu K; 
#=GF RL   J Biol Chem. 2002;277:2830-2834.
#=GF DR   INTERPRO; IPR015084;
#=GF CC   Members of this family contain a cross-linked, proteinous
#=GF CC   quinone cofactor, cysteine tryptophylquinone, which is required
#=GF CC   for catalysis of the oxidative deamination of a wide range of
#=GF CC   aliphatic and aromatic amines. The domain assumes a globular
#=GF CC   secondary structure, with two short alpha-helices having many
#=GF CC   turns and bends [1].
#=GF SQ   24
#=GS Q5P5Q8_AROAE/32-106      AC Q5P5Q8.1
#=GS A1B2Q8_PARDP/31-105      AC A1B2Q8.1
#=GS V9VWI8_9RHOB/29-103      AC V9VWI8.1
#=GS W0AGK3_9SPHN/36-109      AC W0AGK3.1
#=GS A0A0C2Y5D0_BACBA/32-106  AC A0A0C2Y5D0.1
#=GS A0A0D1WJG6_ANEMI/32-106  AC A0A0D1WJG6.1
#=GS A1K4V3_AZOSB/31-105      AC A1K4V3.1
#=GS A0A0A8JNF1_BACSX/31-105  AC A0A0A8JNF1.1
#=GS C4ZJ21_THASP/31-105      AC C4ZJ21.1
#=GS Q4K968_PSEF5/31-105      AC Q4K968.2
#=GS QADG_PSEPK/3-77          AC P0A181.2
#=GS H0PVH2_9RHOO/31-105      AC H0PVH2.1
#=GS A8ES18_ARCB4/31-105      AC A8ES18.1
#=GS G2J4L7_PSEUL/31-105      AC G2J4L7.1
#=GS C4KB03_THASP/32-106      AC C4KB03.1
#=GS F2J2J7_POLGS/32-106      AC F2J2J7.1
#=GS N6YEE8_9RHOO/31-105      AC N6YEE8.1
#=GS Q2G3V8_NOVAD/35-108      AC Q2G3V8.1
#=GS K0N3W8_DESTT/32-107      AC K0N3W8.1
#=GS U7G8Z4_9RHOB/32-106      AC U7G8Z4.1
#=GS A0A060BA27_9GAMM/28-102  AC A0A060BA27.1
#=GS S6AWN0_PSERE/31-105      AC S6AWN0.1
#=GS A0A024HIC5_PSEKB/31-105  AC A0A024HIC5.1
#=GS Q5P0U7_AROAE/3-77        AC Q5P0U7.1
Q5P5Q8_AROAE/32-106                 ..AVAGCATTFDPGWELDPF.L.GV.AGLCQPMEADLYGCSDPCWWPAQVPDTLHNYPDWSTGRDDAARDWQALQSVFPK..
#=GR Q5P5Q8_AROAE/32-106      pAS   ...................................*..............................................
A1B2Q8_PARDP/31-105                 .a-LVGCTTSFDPGWEVDAF.G.AV.SNLCQPMEADLYGCADPCWWPAQVADTLNTYPNWSAGADDVMQDWRKLQSVFPE..
#=GR A1B2Q8_PARDP/31-105      pAS   ...................................*..............................................
V9VWI8_9RHOB/29-103                 .v-TAGCATTFDPGWEVDPF.G.GL.AALCQPMEADLYGCSDPCWWPAQVPDIMVNHQNWDENAPNAAKDWRALGATYP-t.
#=GR V9VWI8_9RHOB/29-103      pAS   ...................................*..............................................
W0AGK3_9SPHN/36-109                 vp--MGCSLAFSPGWEVDAG.G.GT.AGLCQPVERDIYDCYVTCFWPVQVPDHVNYSPDWASNCAVATKDWRNLDLVFP-..
#=GR W0AGK3_9SPHN/36-109      pAS   ...................................*..............................................
A0A0C2Y5D0_BACBA/32-106             lp--MGCTSLFDPGWETDFS.GmGL.EGVCQPHYRDIYGCYGDCWWAAQVPDGLTNYGSWADECPVAANDWRKLKYVK--p.
#=GR A0A0C2Y5D0_BACBA/32-106  pAS   ...................................*..............................................
A0A0D1WJG6_ANEMI/32-106             lp--MGCATLFDPGWETDFS.G.MVlDGLCQPHYRDIYGCYGDCWWAAQVPDGLTNYGSYSDECPVAANDWRKLQYVK--p.
#=GR A0A0D1WJG6_ANEMI/32-106  pAS   ...................................*..............................................
A1K4V3_AZOSB/31-105                 ..AVVGCTATVDPGWEVDAF.G.GV.GSLCQPMEADLYGCADPCWWPAQVPDVMNTYPDWGKDAPDLTQDWRKLGSVFP-g.
#=GR A1K4V3_AZOSB/31-105      pAS   ...................................*..............................................
A0A0A8JNF1_BACSX/31-105             lp--IGCTTVFDPGWEADSSeI.SV.AALCQPMERDLYGCYGDCWWAAQVPDGLTKYPEWHQDCPAAVRDWQKLKFI---de
#=GR A0A0A8JNF1_BACSX/31-105  pAS   ...................................*..............................................
C4ZJ21_THASP/31-105                 ..AIAGCAATVDPGWEVDAF.G.GV.SSLCQPMESDLYGCADPCWWPAQVPDVMNTYPDWNKDATNSREDWRNLGSVFP-g.
#=GR C4ZJ21_THASP/31-105      pAS   ...................................*..............................................
Q4K968_PSEF5/31-105                 ..SVAGCASTTDPGWEIDAF.G.GV.SSLCQPMEADLYGCSDPCWWPAQVPDMMSTYPDWNKDAQASNDNWRNLGTVFPK..
#=GR Q4K968_PSEF5/31-105      pAS   ...................................*..............................................
QADG_PSEPK/3-77                     ..AVAGCTATTDPGWEVDAF.G.GV.SSLCQPMEADLYGCSDPCWWPAQVPDMMSTYQDWNAQASNSAEDWRNLGTVFPK..
#=GR QADG_PSEPK/3-77          AS    ...................................*..............................................
H0PVH2_9RHOO/31-105                 ..SVVGCTTTFDPGWEVDAF.G.GL.ASLCQPMEADLYGCTDPCWWPAQLADSLNTARDWTDGKNSALRDWRELQTLFP-g.
#=GR H0PVH2_9RHOO/31-105      pAS   ...................................*..............................................
A8ES18_ARCB4/31-105                 ..SVVGCVTTFDPGWEVDSD.G.GV.ASLCQPMEADLYGCSDPCWWPTQVPDTSSSYKKWSEKAPATKDDWRELENVYPK..
#=GR A8ES18_ARCB4/31-105      pAS   ...................................*..............................................
G2J4L7_PSEUL/31-105                 .s-IAGCTATTDPGWEVDVF.G.GV.SSLCQPMESDLYGCSDPCWWPAQVPDMMSTYPDWNKAANNSSEDWRHLGTVFPK..
#=GR G2J4L7_PSEUL/31-105      pAS   ...................................*..............................................
C4KB03_THASP/32-106                 ..TVVGCTATTDPGWEIDAF.G.GA.ASLCQPMEADLYGCADSCWWPAQVPDTMSHYPDWGDGKADATRDWRKLDGIFE-d.
#=GR C4KB03_THASP/32-106      pAS   ...................................*..............................................
F2J2J7_POLGS/32-106                 .i-VAGCTSTLDPGWEVDPF.G.GV.AALCQPMEADLYGCSDPCWWPAQVPDTINSYKDWNAGADNAGKDWRSLGTVFP-s.
#=GR F2J2J7_POLGS/32-106      pAS   ...................................*..............................................
N6YEE8_9RHOO/31-105                 .a-LAGCTATVDPGWEVDAF.G.GV.ASLCQPMESDLYGCADPCWWPAQVPDVMNTYPDWNKDAANTREDWRNLGSVFP-g.
#=GR N6YEE8_9RHOO/31-105      pAS   ...................................*..............................................
Q2G3V8_NOVAD/35-108                 vp--MGCTLSFSPGWEVDAG.G.GT.AGLCQPAERDLYDCYVTCFWPVQVPDHVNYSPDWASNCATAAKDWRSLDIIFP-..
#=GR Q2G3V8_NOVAD/35-108      pAS   ...................................*..............................................
K0N3W8_DESTT/32-107                 mp--IGCTTIFDTGWETNPR.A.ETpMSNCLSSARDFTACSGSCWWPAQTPDSVTNFPDFQNQCQAIEKDWRNLNFVI--kr
#=GR K0N3W8_DESTT/32-107      pAS   ...................................*..............................................
U7G8Z4_9RHOB/32-106                 .v-VVGCTSTLDPGWEVDPF.G.GV.AALCQPMEADLYGCSDPCWWPAQVPDTINSYRDWNADADNAGKDWRSLGTVFP-s.
#=GR U7G8Z4_9RHOB/32-106      pAS   ...................................*..............................................
A0A060BA27_9GAMM/28-102             .t-IAGCTSSFDPGWEVDPF.G.GV.ASLCQPMEADLYGCADPCWWPAQVPDTMNTYPNWGDGADRAEDDWRKFDSVYP-g.
#=GR A0A060BA27_9GAMM/28-102  pAS   ...................................*..............................................
S6AWN0_PSERE/31-105                 ..AVAGCTATTDPGWEVDAF.G.GV.SSLCQPMEADLYGCSDPCWWPAQVPDMMSTYQDWNAQATNSQEDWRNLGTVFPK..
#=GR S6AWN0_PSERE/31-105      pAS   ...................................*..............................................
A0A024HIC5_PSEKB/31-105             ..SVAGCASTTDPGWEIDVF.G.GV.SSLCQPMEADLYGCSDPCWWPAQVPDMMSTYPNWNKDAQASAEDWRNLGTVFP-d.
#=GR A0A024HIC5_PSEKB/31-105  pAS   ...................................*..............................................
Q5P0U7_AROAE/3-77                   ..SVVGCTTTFDPGWEIDAF.G.GL.ASLCQPMEADLYGCTDPCWWPAQLADGLNSARDWTDGKNSALRDWRELQTLFP-g.
#=GR Q5P0U7_AROAE/3-77        pAS   ...................................*..............................................
#=GC seq_cons                       ...lsGCToThDPGWEVDsF.G.GV.uuLCQPMEADLYGCuDPCWWPAQVPDshsoYsDWssssssuscDWRpLsoVFP...
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