GenomeNet

Database: Pfam
Entry: RE_HaeII
LinkDB: RE_HaeII
Original site: RE_HaeII 
#=GF ID   RE_HaeII
#=GF AC   PF09554.5
#=GF DE   HaeII restriction endonuclease
#=GF AU   Coggill P
#=GF SE   Bateman A
#=GF GA   25.00 25.00;
#=GF TC   106.70 106.50;
#=GF NC   19.70 19.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   11852561
#=GF RT   [Testing and isolation of high-purity restriction
#=GF RT   endonucleases]. 
#=GF RA   Puchkova LI, Ushakova TA, Mikhailova VK, Serov GD, Krivopalova
#=GF RA   GN, Repin VE; 
#=GF RL   Prikl Biokhim Mikrobiol. 2002;38:20-24.
#=GF RN   [2]
#=GF RM   22638584
#=GF RT   Sequence, structure and functional diversity of PD-(D/E)XK
#=GF RT   phosphodiesterase superfamily.
#=GF RA   Steczkiewicz K, Muszewska A, Knizewski L, Rychlewski L, Ginalski
#=GF RA   K;
#=GF RL   Nucleic Acids Res. 2012;40:7016-7045.
#=GF DR   INTERPRO; IPR019058;
#=GF CC   This family includes the HaeII (recognises and cleaves RGCGC^Y)
#=GF CC   restriction endonuclease.
#=GF SQ   29
#=GS D1D894_NEIGO/8-343    AC D1D894.1
#=GS F2C206_HAEAE/7-344    AC F2C206.1
#=GS A4N0A4_HAEIF/7-344    AC A4N0A4.1
#=GS D6H9Y8_NEIGO/5-271    AC D6H9Y8.1
#=GS T2H2_HAEAE/7-344      AC O30869.1
#=GS A3IJ86_9CHRO/8-205    AC A3IJ86.1
#=GS Q4QK84_HAEI8/7-344    AC Q4QK84.1
#=GS E6KAK0_9BACT/7-342    AC E6KAK0.1
#=GS D1DL07_NEIGO/8-343    AC D1DL07.1
#=GS A7BSW8_9GAMM/8-347    AC A7BSW8.1
#=GS Q5F5D7_NEIG1/8-343    AC Q5F5D7.1
#=GS T2B1_NEIGO/8-343      AC Q50973.2
#=GS E8SMT7_NEIGO/8-343    AC E8SMT7.1
#=GS B1WXK7_CYAA5/1-260    AC B1WXK7.1
#=GS C1HUQ0_NEIGO/8-343    AC C1HUQ0.1
#=GS D1DSS4_NEIGO/8-343    AC D1DSS4.1
#=GS G6H0C9_9CHRO/1-260    AC G6H0C9.1
#=GS D1EBK0_NEIGO/8-343    AC D1EBK0.1
#=GS E7AH90_HAEIF/7-344    AC E7AH90.1
#=GS D6JJ57_NEIGO/8-343    AC D6JJ57.1
#=GS D1ECI0_NEIGO/8-343    AC D1ECI0.1
#=GS C6S4J2_NEIML/8-343    AC C6S4J2.1
#=GS A0YZ87_LYNSP/342-679  AC A0YZ87.1
#=GS D1DZQ0_NEIGO/8-343    AC D1DZQ0.1
#=GS B4RQP2_NEIG2/8-343    AC B4RQP2.1
#=GS D1DLE2_NEIGO/8-343    AC D1DLE2.1
#=GS F0F9N4_9BACT/3-86     AC F0F9N4.1
#=GS D1DEK7_NEIGO/8-343    AC D1DEK7.1
#=GS E2PD56_NEIPO/8-343    AC E2PD56.1
D1D894_NEIGO/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
F2C206_HAEAE/7-344               .....AKESLDKIIKKARVHLYKPIQIAEILYQDRVNKNI..NLLDKETYRNISKKWRDVICIRFLGRVSTSSAKYQDDLFNDNAMPPKHLNILGEMNRKTNGGVESYIYKKFFERFNQMSSALEY..SY..SRTPDNFHLSEFLALFWLEPGLKRSIDKVYEIVVYALFSSLIEALGVKVKIDLDLSNIDLLKEFEDFTRQIISLDSENTSLELNAKINRVGVTNASDRGLDMWANFGMAIQIKHLSLTEELAENIVSSVSSDRIVIVCKESEEKLILSLLNQIGWRSKIQSIITEADLIKWYDKALRGKSAYLVGSKILEHIRNEISLEFPAT.DIVDFNHFFHEREY......................
A4N0A4_HAEIF/7-344               .....AKESLDKIIKKARVHLYKPIQIAEILYQDRVNKNI..NLLDKETYRNISKKWRDVICIRFLGRVSTSSAKYQDDLFNDNAMPPKHLNILGEMNRKTNGGVESYIYKKFFERFNQMSSALEY..SY..SRTPDNFHLSEFLALFWLEPGLKRSIDKVYEIVVYALFSSLIEALGVKVKIDLDLSNIDLLKEFEDFTRQIISLDSENTSLELNAKINRVGVTNASDRGLDMWANFGMAIQIKHLSLTEELAENIVSSVSSDRIVIVCKESEEKLILSLLNQIGWRSKIQSIITEADLIKWYDKALRGKSAYLVGSKILEHIRNEISLEFPAT.DIVDFNHFFHEREY......................
D6H9Y8_NEIGO/5-271               kiicl-----------------------------------..---------------------------------------KKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
T2H2_HAEAE/7-344                 .....AKESLDKIIKKARVHLYKPIQIAEILYQDRVNKNI..NLLDKETYRNISKKWRDVICIRFLGRVSTSSAKYQDDLFNDNAMPPKHLNILGEMNRKTNGGVESYIYKKFFERFNQMSSALEY..SY..SRTPDNFHLSEFLALFWLEPGLKRSIDKVYEIVVYALFSSLIEALGVKVKIDLDLSNIDLLKEFEDFTRQIISLDSENTSLELNAKINRVGVTNASDRGLDMWANFGMAIQIKHLSLTEELAENIVSSVSSDRIVIVCKESEEKLILSLLNQIGWRSKIQSIITEADLIKWYDKALRGKSAYLVGSKILEHIRNEINLEFPAT.DIVDFNHFFHEREY......................
A3IJ86_9CHRO/8-205               .....AKMKLDKIINKSRTRFYKPIQIAEVLYHSRVDNNI..DTSNKEDYRIKSKLWRDQVTNRLLHQSSTSSSRFQDDIWNDNAMPPEMLKVLDDFNKKNSGIVEKYIYDKFKEKLGVISSIIQIflVG..LSCPNNFQLDNLLSLFRQEAGIKRSIDKCYEIITYSLLETVINQLEAEIEEFP------------------------------------------------------------------------------------------------------------------------------------------------------.--------------evteiiefyqerqyteiqllqm
Q4QK84_HAEI8/7-344               .....AKESLDKIIKKARVHLYKPIQIAEILYQDRVNKNI..NLLDKETYRNISKKWRDVICIRFLGRVSTSSAKYQDDLFNDNAMPPKHLNILGEMNRKTNGGVESYIYKKFFERFNQMSSALEY..SY..SRTPDNFHLSEFLALFWLEPGLKRSIDKVYEIVVYALFSSLIEALGVKVKIDLDLSNIDLLKEFEDFTRQIISLDSENTSLELNAKINRVGVTNASDRGLDMWANFGMAIQIKHLSLTEELAENIVSSVSSDRIVIVCKESEEKLILSLLNQIGWRSKIQSIITEADLIKWYDKALRGKSAYLVGSKILEHIRNEISLEFPAT.DIVDFNHFFHECEY......................
E6KAK0_9BACT/7-342               .....AKAALDTVIKKSRVHLYKPIQIAEILYRDRIYKDI..NLLSLEDYRTKSKKWRDKVSIVLLGRVSTSSARFQDDLFNDNATPPAVLDVLGHENRRTNGAVEAYIYNKFDYKHEQLSNALSY..CL..DADTESFEVKKFIDSFWNEPGLKRSLDKIYEIIVYALFSTLVDAMNLKVEVTVGEEAYPLLKEFEEFTKKIMCLDCSTPQHIQEAKVYRVGVTNAADRGLDMYSNWGPAIQIKHLSLDLTIAENIVNSVSSDRIVIVCKDAEKDVIVSLLTQIGWRSHIQSIVTENDLVTWYEKALRGSYSDMLGEKLLFCLANEIAEEFPSV.DSTP--EIIKER--hy....................
D1DL07_NEIGO/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
A7BSW8_9GAMM/8-347               .....AKNALDSIIKKSRVHLYKPIQIAEILYNARTQPDLeiELSNLESYRTRSKQWRDVVCIQFLGRVSTSSAKFQDNLFEENAMPPHLLSILGVENQKNNGIVEAYIYQAFEDKHLQLDNALNY..CL..TSTKENFKLGEFLNQFWSEAGLKRSLDKIFEMVVYSLFEVLTTSIHVKIDIYYNTNNTDILNEFSEFSDKVLNLTASTNRKTLDAHFHRVGVTNAADRGLDMYANFGSVVQIKHLSLDKDLAENIVTSLTANRIIIVCKSAEEEVINSLLNQIGWQARIQSIITIDELIDWYDKALIGKYSELLGEKVIATLSEEIKNEFPSV.GNNDFQNFKKNRGY......................
Q5F5D7_NEIG1/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
T2B1_NEIGO/8-343                 .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSERLAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
E8SMT7_NEIGO/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
B1WXK7_CYAA5/1-260               .....-----------------------------------..-------------------------------------------MPPEILKVLDDFNKKNLGIVEKYIYDKFKEKLGIISSIIQI..VLvgVSCPNNFQLDNLLSLFRQEAGIKRSIDKCYEIITYSLLETVVNQLEAEITVKIPEKNYLLLQEFSDLSKVLLNVNPDKPEWTELAHIYRVGVTNAADRGLDMWANFGPVIQVKHLTLNSAQVETIVDQIESDHIIIVCRDADASVISILMKQIGWGKRVRGIVKESQLIEWYNRCLRGKFSHQISQPLMNLLQKSFEEEFPEV.--TEIIEFYQERQY......................
C1HUQ0_NEIGO/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
D1DSS4_NEIGO/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
G6H0C9_9CHRO/1-260               .....-----------------------------------..-------------------------------------------MPPEILKVLDDFNKKNLGIVEKYIYDKFKEKLGIISSIIQI..VLvgVSCPNNFQLDNLLSLFRQEAGIKRSIDKCYEIITYSLLETVVNQLEAEITVKIPEKNYLLLQEFSDLSKVLLNVNPDKPEWTELAHIYRVGVTNAADRGLDMWANFGPVIQVKHLTLNSAQVETIVDQIESDHIIIVCRDADASVISILMKQIGWGKRVRGIVKESQLIEWYNRCLRGKFSHQISQPLMNLLQKSFEEEFPEV.--TEIIEFYQERQY......................
D1EBK0_NEIGO/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
E7AH90_HAEIF/7-344               .....AKESLDKIIKKARVHLYKPIQIAEILYQDRVNKNI..NLLDKETYRNISKKWRDVICIRFLGRVSTSSAKYQDDLFNDNAMPPKHLNILGEMNRKTNGGVESYIYKKFFERFNQMSSALEY..SY..SRTPDNFHLSEFLALFWLEPGLKRSIDKVYEIVVYALFSSLIEALGVKVKIDLDLSNIDLLKEFEDFTRQIISLDSENTSLELNAKINRVGVTNASDRGLDMWANFGMAIQIKHLSLTEELAENIVSSVSSDRIVIVCKESEEKLILSLLNQIGWRSKIQSIITEADLIKWYDKALRGKSAYLVGSKILEHIRNEISLEFPAT.DIVDFNHFFHEREY......................
D6JJ57_NEIGO/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
D1ECI0_NEIGO/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
C6S4J2_NEIML/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAMPPEKLAVLGTLNRQLDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIVSI-PQNGHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLIRWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQSRGY......................
A0YZ87_LYNSP/342-679             .....AKDALDNIINKARVHFYKPIQVAEILYHHRVFDDL..TLSNLNTYRKSSKKWRDIICKRFLGRITTSSSRYQDNLFEQNATPPEVLMVLGEENKSKLGIVEAYIYRKFIERYSQMTSGLAY..CM..KSDIENFKLTEFIGQFQNNPGLKRSIDKIYEIVVYALFKVLIEELNVTVKVQLDFNKLDLLKEFEDFTQKVLSINSQNPSFTASAKFYRVGVTNAADRGLDMWANYGSAVQIKYLSLNEGLAEGIVSNITADRIVIVCRDSEERTIVSLLNQIGWKSRIQSIITQSHLEAWYEKALRGSFRNILGARLIEILIEEIKYEFPSS.ESNDLVSFMEEREY......................
D1DZQ0_NEIGO/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
B4RQP2_NEIG2/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
D1DLE2_NEIGO/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
F0F9N4_9BACT/3-86                ...fn-----------------------------------..------------------------------------------------------------------------------------..--..-------------------------------------------------------------------------------------------------------------------------------------IYLVCKDAEEKTIVSLLNQIGWKSKIQNIVTEKELIKWYKKALTGTYSELLASKLLNTLSEEMQLEFPSL.DA------------lpdaltqrhy............
D1DEK7_NEIGO/8-343               .....AKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITM-PKNEHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
E2PD56_NEIPO/8-343               .....AKEALDGIIKKSRIHLYKPIQIAEILYHDRCIKQL..DFLNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAMPPEKLAVLGTLNRQSDGGVESYIYKQFFNRFSQMSEALAY..VG..NTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIVSI-PQNGHLKLPAKIHRVGVTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSLLTQIGWKSRIQNIVTEDDLISWYEKALRGQYP--IAEALLENIKTEIMREFPAVnEANEFLDFAQNRGY......................
#=GC seq_cons                    .....AKEALDsIIKKSRVHLYKPIQIAEILYHDRshKpL..-hLNL-TYRNpSK+WRDpICpRFLGRlSTSSAKFQDNLFEcNAhPPE+LuVLGshNRposGGVESYIYKpFFsRFSQMSpALAY..VG..soD+.SFQLSEFLNLFWLEPGLKRSIDKIYEIVVYALF-uLVoELGlTVoIDaPcENLhLhcEapDFu-KIIoh.PcNp+LcLsAKIHRVGVTNAADRGLDMWSNFGhAIQVKHLSLDEELAEsIVSSISADRIVIVCKcAEpSVIVSLLTQIGWKSRIQNIVTEDDLIsWYEKALRGpYs..IAEsLLEsI+sEIhcEFPAV.EANEFl-FtQsRGY......................
//
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