GenomeNet

Database: Pfam
Entry: RNA_pol_inhib
LinkDB: RNA_pol_inhib
Original site: RNA_pol_inhib 
#=GF ID   RNA_pol_inhib
#=GF AC   PF16857.9
#=GF DE   RNA polymerase inhibitor
#=GF AU   Eberhardt R;0000-0001-6152-1369
#=GF SE   PDB:2lmc
#=GF GA   27.00 27.00;
#=GF TC   36.20 35.20;
#=GF NC   26.80 24.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   20133868
#=GF RT   T7 phage protein Gp2 inhibits the Escherichia coli RNA
#=GF RT   polymerase by antagonizing stable DNA strand separation near the
#=GF RT   transcription start site.
#=GF RA   Camara B, Liu M, Reynolds J, Shadrin A, Liu B, Kwok K, Simpson
#=GF RA   P, Weinzierl R, Severinov K, Cota E, Matthews S, Wigneshweraraj
#=GF RA   SR;
#=GF RL   Proc Natl Acad Sci U S A. 2010;107:2247-2252.
#=GF RN   [2]
#=GF RM   22819324
#=GF RT   Structural and mechanistic basis for the inhibition of
#=GF RT   Escherichia coli RNA polymerase by T7 Gp2.
#=GF RA   James E, Liu M, Sheppard C, Mekler V, Camara B, Liu B, Simpson
#=GF RA   P, Cota E, Severinov K, Matthews S, Wigneshweraraj S;
#=GF RL   Mol Cell. 2012;47:755-766.
#=GF RN   [2]
#=GF RM   24218560
#=GF RT   Phage T7 Gp2 inhibition of Escherichia coli RNA polymerase
#=GF RT   involves misappropriation of sigma70 domain 1.1.
#=GF RA   Bae B, Davis E, Brown D, Campbell EA, Wigneshweraraj S, Darst
#=GF RA   SA;
#=GF RL   Proc Natl Acad Sci U S A. 2013;110:19772-19777.
#=GF DR   INTERPRO; IPR016412;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This bacteriophage protein inhibits the bacterial host RNA
#=GF CC   polymerase by interacting with the RpoC subunit and inhibiting
#=GF CC   the formation of a promoter complex [1-3].
#=GF SQ   101
#=GS A0A5P8NKF2_9CAUD/2-48   AC A0A5P8NKF2.1
#=GS A0A7G9IRC7_9CAUD/6-51   AC A0A7G9IRC7.1
#=GS A0A873WSY6_9CAUD/2-53   AC A0A873WSY6.1
#=GS Q9T135_9CAUD/30-75      AC Q9T135.1
#=GS A0A170PBB6_9CAUD/8-52   AC A0A170PBB6.1
#=GS A0A8E5CER1_9CAUD/14-60  AC A0A8E5CER1.1
#=GS A0A2P1CKX4_9CAUD/23-69  AC A0A2P1CKX4.1
#=GS A0A5B9NEA5_9CAUD/2-47   AC A0A5B9NEA5.1
#=GS A0A385IFE5_9CAUD/5-52   AC A0A385IFE5.1
#=GS A0A1I9SEC4_9CAUD/12-57  AC A0A1I9SEC4.1
#=GS A0A678ZNY6_9CAUD/1-47   AC A0A678ZNY6.1
#=GS A0A0E3M1G6_9CAUD/30-75  AC A0A0E3M1G6.1
#=GS A0A059VJN4_9CAUD/8-52   AC A0A059VJN4.1
#=GS A0A4D6DRQ8_9CAUD/14-60  AC A0A4D6DRQ8.1
#=GS A0A172JGC9_9CAUD/23-68  AC A0A172JGC9.1
#=GS A0A385IF43_9CAUD/1-30   AC A0A385IF43.1
#=GS A0A514U696_9CAUD/29-74  AC A0A514U696.1
#=GS B4YQE8_9CAUD/22-68      AC B4YQE8.1
#=GS A0A6B9RGU8_9CAUD/14-60  AC A0A6B9RGU8.1
#=GS A0A250KAC2_9CAUD/8-54   AC A0A250KAC2.1
#=GS A0A7G9UTP4_9CAUD/6-51   AC A0A7G9UTP4.1
#=GS A0A1P8L673_9CAUD/8-54   AC A0A1P8L673.1
#=GS Q859G8_9CAUD/8-52       AC Q859G8.1
#=GS L0HNN8_9CAUD/14-58      AC L0HNN8.1
#=GS A0A7G9UTD4_9CAUD/2-47   AC A0A7G9UTD4.1
#=GS A0A0A0YV77_9CAUD/2-42   AC A0A0A0YV77.1
#=GS A0A249Y2T8_9CAUD/30-75  AC A0A249Y2T8.1
#=GS A0A3G8F5Q9_9CAUD/2-47   AC A0A3G8F5Q9.1
#=GS A0A5J6TB77_9CAUD/13-59  AC A0A5J6TB77.1
#=GS A0A0N7J838_9CAUD/13-59  AC A0A0N7J838.1
#=GS A0A6M3TC82_9CAUD/9-53   AC A0A6M3TC82.1
#=GS A0A6M5CAB7_9CAUD/14-60  AC A0A6M5CAB7.1
#=GS A0A7D5G3U1_9CAUD/12-57  AC A0A7D5G3U1.1
#=GS A0A7T7CL72_9CAUD/2-52   AC A0A7T7CL72.1
#=GS A0A2D0YLI6_9CAUD/4-56   AC A0A2D0YLI6.1
#=GS A0A2Z5H4D8_9CAUD/13-59  AC A0A2Z5H4D8.1
#=GS A0A5J6TAW5_9CAUD/6-51   AC A0A5J6TAW5.1
#=GS A0A4P6PH41_9CAUD/2-47   AC A0A4P6PH41.1
#=GS A0A898KBQ1_9CAUD/30-75  AC A0A898KBQ1.1
#=GS A0A5Q2WBP2_9CAUD/2-47   AC A0A5Q2WBP2.1
#=GS A0A1V0E680_9CAUD/2-47   AC A0A1V0E680.1
#=GS A0A2S1GSX2_9CAUD/14-60  AC A0A2S1GSX2.1
#=GS A0A7S6R9I1_9CAUD/32-77  AC A0A7S6R9I1.1
#=GS Q778L9_BPT3/6-51        AC Q778L9.1
#=GS A0A7L7SQV0_9CAUD/13-59  AC A0A7L7SQV0.1
#=GS I6QA04_9CAUD/14-60      AC I6QA04.1
#=GS A0A6G6AH25_9CAUD/6-51   AC A0A6G6AH25.1
#=GS A0A7G7YB56_9CAUD/6-51   AC A0A7G7YB56.1
#=GS A0A7G8LJ68_9CAUD/10-54  AC A0A7G8LJ68.1
#=GS B3VCI7_9CAUD/14-60      AC B3VCI7.1
#=GS A0A219YHD7_9CAUD/29-74  AC A0A219YHD7.1
#=GS A0A2D0PE97_9CAUD/14-60  AC A0A2D0PE97.1
#=GS A0A5B9N763_9CAUD/29-74  AC A0A5B9N763.1
#=GS A0A1L7DRY4_9CAUD/8-54   AC A0A1L7DRY4.1
#=GS B3VCZ0_9CAUD/2-47       AC B3VCZ0.1
#=GS E1XU91_9CAUD/30-76      AC E1XU91.1
#=GS W6PJJ3_9CAUD/6-51       AC W6PJJ3.1
#=GS A0A7G8L161_9CAUD/6-51   AC A0A7G8L161.1
#=GS A0A7S6R7C1_9CAUD/14-60  AC A0A7S6R7C1.1
#=GS A0A2D2W5W2_9CAUD/15-61  AC A0A2D2W5W2.1
#=GS A0A5J6DBB4_9CAUD/13-59  AC A0A5J6DBB4.1
#=GS K4NXN2_9CAUD/23-69      AC K4NXN2.1
#=GS A0A2K9VGY7_9CAUD/32-77  AC A0A2K9VGY7.1
#=GS A0A2D0Z7U1_9CAUD/4-56   AC A0A2D0Z7U1.1
#=GS A0A088F630_9CAUD/30-75  AC A0A088F630.1
#=GS A0A7G8LJT1_9CAUD/8-52   AC A0A7G8LJT1.1
#=GS A0A2S1PGW0_9CAUD/2-42   AC A0A2S1PGW0.1
#=GS A0A1J0MEQ9_9CAUD/13-60  AC A0A1J0MEQ9.1
#=GS VRPI_BPT7/14-60         AC P03704.1
#=GS A0A4Y5TWH7_9CAUD/2-47   AC A0A4Y5TWH7.1
#=GS A0A2S1GTE3_9CAUD/13-58  AC A0A2S1GTE3.1
#=GS A0A0E3M2X6_9CAUD/30-75  AC A0A0E3M2X6.1
#=GS A0A6M3T8I0_9CAUD/7-51   AC A0A6M3T8I0.1
#=GS Q3YJZ0_BPK1F/6-51       AC Q3YJZ0.1
#=GS V5YTN4_9CAUD/12-52      AC V5YTN4.1
#=GS G0YQ54_9CAUD/2-48       AC G0YQ54.1
#=GS A0A346NSV9_9CAUD/1-30   AC A0A346NSV9.1
#=GS I6Q9A4_9CAUD/14-60      AC I6Q9A4.1
#=GS W6Q7F0_9CAUD/6-51       AC W6Q7F0.1
#=GS A0A2H1UL39_9CAUD/14-60  AC A0A2H1UL39.1
#=GS A0A172JG92_9CAUD/6-51   AC A0A172JG92.1
#=GS A0A0K2FGU8_9CAUD/3-48   AC A0A0K2FGU8.1
#=GS F0V6X7_9CAUD/9-53       AC F0V6X7.1
#=GS B6Z9F4_9CAUD/14-60      AC B6Z9F4.1
#=GS A0A1B0TRA2_9CAUD/6-51   AC A0A1B0TRA2.1
#=GS A0A384X1C8_9CAUD/8-53   AC A0A384X1C8.1
#=GS A0A2U7NJP5_9CAUD/2-50   AC A0A2U7NJP5.1
#=GS A0A2Z4QIN7_9CAUD/2-42   AC A0A2Z4QIN7.1
#=GS A0A385IFS6_9CAUD/5-52   AC A0A385IFS6.1
#=GS A0A8F2JCZ4_9CAUD/6-51   AC A0A8F2JCZ4.1
#=GS A0A2K9VK20_9CAUD/14-60  AC A0A2K9VK20.1
#=GS A0A192YC04_9CAUD/22-68  AC A0A192YC04.1
#=GS A0A7S6KWQ5_9CAUD/4-53   AC A0A7S6KWQ5.1
#=GS A0A088FBS1_9CAUD/14-60  AC A0A088FBS1.1
#=GS A0A0S2MVT7_9CAUD/9-53   AC A0A0S2MVT7.1
#=GS A0A1B2AN88_9CAUD/9-49   AC A0A1B2AN88.1
#=GS A0A192Y930_9CAUD/37-83  AC A0A192Y930.1
#=GS A0A2D3QNX2_9CAUD/12-57  AC A0A2D3QNX2.1
#=GS A0ZXI8_9CAUD/14-60      AC A0ZXI8.1
#=GS A0A0D3QHF0_9CAUD/14-60  AC A0A0D3QHF0.1
#=GS E9KIE8_9CAUD/2-42       AC E9KIE8.1
A0A5P8NKF2_9CAUD/2-48              .................KHFVVEVET..Q.THTFEVPVYAETIEEAHDKAEAEYVPA.GFAVTRVRPN........
A0A7G9IRC7_9CAUD/6-51              .................KKYIVELEG..H.IQSFEVPVYAKSLEEATLKSQE-YEDA.GFVVGRIRPE........
A0A873WSY6_9CAUD/2-53              ..rkfiveivercivsg--------S..V.ANSYEVPVYAENLDEALEVIDQKYTSQ.GVETGRV---y.......
Q9T135_9CAUD/30-75                 .................QKYLLTIEG..N.TESFEVLVFARSLEEATLQAEH-YEDA.GFVVTRIRPE........
A0A170PBB6_9CAUD/8-52              .................KLFKATVKV..R.GEIEEVPVWADSIETALEVVDAEYGED.--NVYRLRPE........
A0A8E5CER1_9CAUD/14-60             .................KKFFATVEG..Q.GQSFEVPVFATSLEEANELAEWQYVPA.GFAVTRIRPD........
A0A2P1CKX4_9CAUD/23-69             .................RKFWATVQT..A.EHSYEMPIYAVSLEEATELAERQYVPA.GFEVIRVRPC........
A0A5B9NEA5_9CAUD/2-47              .................QKFVVTVET..A.NASYELPVHAGSLEEALEVAEAEYEEL.G-QVTRVRPD........
A0A385IFE5_9CAUD/5-52              .................KKFYVTIQS..PlGGECEFPMYAESLDEATKQADFEYEQA.GFPVSRIRPE........
A0A1I9SEC4_9CAUD/12-57             .................KKYIVELEG..R.VQSFEVPVYAKSLEEATLKSQE-YEDA.GFVVGRIRPE........
A0A678ZNY6_9CAUD/1-47              ................m-KFWVTLET..V.HQSLEVPVYAGTLEEALQVAEDEYMEL.GVCATRVRPD........
A0A0E3M1G6_9CAUD/30-75             .................QKYLLTIEG..N.TESFEIPVFARSLEEATLQAEH-YEDA.GFVVTRIRPE........
A0A059VJN4_9CAUD/8-52              .................KLFKATVKF..R.GEMQEVPIWAESIETALEVADLEYGED.--NVYRLRPE........
A0A4D6DRQ8_9CAUD/14-60             .................KKFFATVEG..Q.GQSFEVPVFAVSLEEANELAEWQYVPA.GFAVTRIRPD........
A0A172JGC9_9CAUD/23-68             .................KKYIVELEG..R.VQSFEVPVYAKSLDEATLKSQE-YEDA.GFVVGRIRPE........
A0A385IF43_9CAUD/1-30              ................m---------..-.--------YAESLDEAAKQADFEYEQA.GFPVSRIRPE........
A0A514U696_9CAUD/29-74             .................QKFVVTVET..A.NASYELPVHAGSLEEALEVAEAEYEEL.G-QVTRVRPD........
B4YQE8_9CAUD/22-68                 .................KKFIVHLQG..S.SSEIEVPVYAKSLDEALEVAEWTYQEA.GFEIARVRPA........
A0A6B9RGU8_9CAUD/14-60             .................KKFWATVES..S.EHSFEVPVYAETLDEALELAEWQYVPA.GFEVTRVRPC........
A0A250KAC2_9CAUD/8-54              .................KKFLVTVET..T.LGETEVPVFAETLDEALDVAELKYIPA.GLAVTRVRPE........
A0A7G9UTP4_9CAUD/6-51              .................QKYLLTIEG..N.TESFEVPVFARSLEEATLQAEH-YEDA.GFVVTRIRPE........
A0A1P8L673_9CAUD/8-54              .................KKFLVTVET..T.LGETEVPVFAETLDEALDVAELKYVPA.GLAVTRVRPE........
Q859G8_9CAUD/8-52                  .................KLFKATVKF..R.GEMQEVPIWAESIETALEVADLEYGED.--NVYRLRPE........
L0HNN8_9CAUD/14-58                 .................KKFWATVES..S.EHSFEVPIYAETLDEAVELAEWQYVPA.GFEVTRV---a.......
A0A7G9UTD4_9CAUD/2-47              .................QKFVVTVET..A.NASYELPVHAGSLEEALEVAEAEYEEL.G-QVTRVRPD........
A0A0A0YV77_9CAUD/2-42              .................KLFKAEVGN..E.----WVPIYAKDLDEALALAEEEYGAA.--AVGRVKPE........
A0A249Y2T8_9CAUD/30-75             .................QKYLLTIEG..N.TESFEVPVFARSLEEATLQAEH-YEDA.GFVVTRIRPE........
A0A3G8F5Q9_9CAUD/2-47              .................QKFVVTVES..A.NASYELPVHAGSLEEALEVADAEYEEL.G-QVTRVRPD........
A0A5J6TB77_9CAUD/13-59             .................KKFWATVES..S.EHSFEVPIYAETLDEALELAEWQYVPA.GFEVTRVRPC........
A0A0N7J838_9CAUD/13-59             .................KKFLVLVES..A.TMSHEVPVYVTSLEEATELAEWQYVPA.GFAVTRVRPD........
A0A6M3TC82_9CAUD/9-53              .................KLFKATIKQ..R.GEIEEVPVWAESIETALEAADLTYGED.--NVYRIRPE........
A0A6M5CAB7_9CAUD/14-60             .................KKFWATVES..S.EHSFEVPIYAETLDEALELAEWQYVPA.GFEVTRVRPC........
A0A7D5G3U1_9CAUD/12-57             .................KKYIVELEG..R.VQSFEVPVYAKSLEEATMKSQE-YEDA.GFVVGRIRPE........
A0A7T7CL72_9CAUD/2-52              hkfiaeiierrpdgeii---------..-.-NSYEVPVYAKTLDAAVELVDKRYTSK.GVETGRI---y.......
A0A2D0YLI6_9CAUD/4-56              .................KKYIVHIQL..V.DTEMEVPVFAEDIGQAAEWAEEAYESQ.GYKVNRIR--eardwepv
A0A2Z5H4D8_9CAUD/13-59             .................KKYFVTLSY..V.DGELEVPVFAGSLEEAHDLATFKYTPV.GFEVLRVRPA........
A0A5J6TAW5_9CAUD/6-51              .................KKYIVELEG..R.VQSFEVPVYAKSLEEATMKSQE-YEDA.GFVVGRIRPE........
A0A4P6PH41_9CAUD/2-47              .................QKFVVTVET..A.NASYELPVHAGSLEEALEVAEAEYEEL.G-QVTRVRPD........
A0A898KBQ1_9CAUD/30-75             .................QKYLLTIEG..N.TESFEIPVFARSLEEATLQAEH-YEDA.GFVVTRIRPE........
A0A5Q2WBP2_9CAUD/2-47              .................QKFVVTVET..A.NASYELPVHAGSLEEALEVAEAEYEEL.G-QVTRVRPD........
A0A1V0E680_9CAUD/2-47              .................QKFVVTVET..A.NASYELPVHAGSLEEALEVAEAEYEEL.G-QVTRVRPD........
A0A2S1GSX2_9CAUD/14-60             .................KRYIATIES..A.YGSIDVPVYAESLEEALELAEWQYVPA.GYVVARVRPE........
A0A7S6R9I1_9CAUD/32-77             .................QKFVVTVET..A.SASYELPVHAGSLEEALEVAEAEYEEL.G-QVTRVRPD........
Q778L9_BPT3/6-51                   ................i-KYLLTMEG..N.TESFEVPVFARSLEEATLQAEQ-YEDA.GFVVTRIRPE........
A0A7L7SQV0_9CAUD/13-59             .................KKFFATVES..A.SQSFEVPVFAETLEEATELAEWQYVPA.GFEVTRVRPQ........
I6QA04_9CAUD/14-60                 .................KKFWATVES..S.KHSFEVPIYAETLDEAVELAEWQYVPA.GFEVTRVRPC........
A0A6G6AH25_9CAUD/6-51              .................KKYIVELEG..R.VQSFEVPVYAKSLEEATLKSQE-YEDA.GFVVGRIRPE........
A0A7G7YB56_9CAUD/6-51              .................KKYIVELEG..R.VQSFEVPVYAKSLEEAALKSQE-YEDA.GFVVGRIRPE........
A0A7G8LJ68_9CAUD/10-54             .................KRFEAELVG..K.FTSSWVPVWARNVDEALEAAELEYGPE.--NVGRVR--qe......
B3VCI7_9CAUD/14-60                 .................KKFFATVEG..Q.GQSFEVPVFAASLEEANELAEWQYVPA.GFAVTRIRPD........
A0A219YHD7_9CAUD/29-74             .................QKFVVTVET..A.NASYELPVHAGSLEEALEVAESEYEEL.G-QVTRVRPD........
A0A2D0PE97_9CAUD/14-60             .................KKFFVTIEG..S.SQSLEVPVYAVNLEEAQALAEWTYVPA.GFEVTRIRPE........
A0A5B9N763_9CAUD/29-74             .................QKFVVTVET..A.NASYELPVHAGSLEEALEVAEAEYEEL.G-QVTRVRPD........
A0A1L7DRY4_9CAUD/8-54              .................KKFLVTVET..T.LGETEVPVFAETLDEALDVAELKYVPA.GLAVTRVRPE........
B3VCZ0_9CAUD/2-47                  .................QKFVVTVET..A.NASYELPVHAGSLDEALEVAEAEYEEL.G-QVTRVRPD........
E1XU91_9CAUD/30-76                 .................KKFWATVES..S.EHSFEVPVYAETLDEALELAEWQYVQA.GFEVTRVRPC........
W6PJJ3_9CAUD/6-51                  .................KKYIVELEG..R.VQSFEVPVYAKSLDEATLKSQE-YEDA.GFVVGRIRPE........
A0A7G8L161_9CAUD/6-51              .................KKYIVELEG..R.VQSFEVPVYAKSLEEATLKSQE-YEDA.GFVVGRIRPE........
A0A7S6R7C1_9CAUD/14-60             .................KKFWATVES..S.EHSFEVPIYAETLDEAVELAEWQYVPA.GFEVTRVRPC........
A0A2D2W5W2_9CAUD/15-61             .................KGFIATVES..A.EQSFDVPIYAKDLDEALELAEWQYVPA.GFLVARVRPK........
A0A5J6DBB4_9CAUD/13-59             .................KKFFATVES..A.SQSFEVPVFAETLEEATELAEWQYVPA.GFEVTRVRPQ........
K4NXN2_9CAUD/23-69                 .................RKFWATIQS..S.EHSYEMPIYAVSLDEATELAERQYVPA.GFEVIRVRPC........
A0A2K9VGY7_9CAUD/32-77             ................a-KFVVTVET..A.NASYELPVHAGSLEEALEVAEAEYEEL.G-QVTRVRPD........
A0A2D0Z7U1_9CAUD/4-56              .................KKYIVHIQL..V.DTEMEVPVFAEDIGQAAEWAEEAYESQ.GYKVNRIR--eardwepv
A0A088F630_9CAUD/30-75             .................QKYLLTIEG..N.TESFEVPVFARSLEEATLQAEH-YEDA.GFVVTRIRPE........
A0A7G8LJT1_9CAUD/8-52              .................KLFKATVLV..K.GQVEEVPIWAESIETALEVADAEYGED.--NVTRLRPE........
A0A2S1PGW0_9CAUD/2-42              .................KLFKAEVGN..E.----WVPIYAKDLDEALALAEEEYGAA.--AVGRVKPE........
A0A1J0MEQ9_9CAUD/13-60             .................KKFFVTIEC..S.SQSFEVPVFAQDLDTALKLAEWQYEADrRFAVTRVRPD........
VRPI_BPT7/14-60                    .................KKFWATVES..S.EHSFEVPIYAETLDEALELAEWQYVPA.GFEVTRVRPC........
A0A4Y5TWH7_9CAUD/2-47              .................QKFVVTVET..A.NASYELPVHAGSLEEALEVAEAEYEEL.G-QVTRVRPD........
A0A2S1GTE3_9CAUD/13-58             .................KKFFVTIEN..A.KESFEVPVFAIDIEDAQAQAVL-YEDA.GFEVVRIRPE........
A0A0E3M2X6_9CAUD/30-75             .................QKYLLTIEG..N.TESFEVPVFARSLEEATLQAEH-YEDA.GFVVTRIRPE........
A0A6M3T8I0_9CAUD/7-51              .................KLFKAKVQI..A.GEVQEVPIWAESIDTALEVADLEYGED.--NVLRLRPE........
Q3YJZ0_BPK1F/6-51                  .................KKYIVELEG..R.VQSFEVPLYAKSLEEATLKSQE-YEDA.GFVVGRIRPE........
V5YTN4_9CAUD/12-52                 .................KLFKAEVHG..Q.----WVPVWARNVDEALEAAELEYGPE.--NVGRVR--qe......
G0YQ54_9CAUD/2-48                  .................KRFIAEVET..Q.THAFEVPVYAETLEEANEKAEAEYVPA.GFAVTRVRPH........
A0A346NSV9_9CAUD/1-30              ................m---------..-.--------YAESLDEAAKQADFEYEQA.GFPVSRIRPE........
I6Q9A4_9CAUD/14-60                 .................KKFFATVEG..Q.GQSFEVPVFAASLEEANELAEWQYVPA.GFAVTRIRPD........
W6Q7F0_9CAUD/6-51                  .................QKYIVELEG..R.VQSFEVPVYAKSLDEATLKSQE-YEDA.GFVVGRIYPE........
A0A2H1UL39_9CAUD/14-60             .................KKFFVTIEG..S.SQSLEVPVYAVNLEEAQALAEWTYVPA.GFEVTRIRPE........
A0A172JG92_9CAUD/6-51              .................KKYIVELEG..R.VQSFEVPVYAKSLEEATLKSQE-YEDA.GFVVGRIRPE........
A0A0K2FGU8_9CAUD/3-48              .................QQFKVTVEG..A.TMSVELPIEADSLEHALELAEAEYESI.G-MVTRVRP-v.......
F0V6X7_9CAUD/9-53                  .................KRFEAELVG..K.FTSSWVPVWARNVDEALEAAEMEYGED.--NVGRVRPK........
B6Z9F4_9CAUD/14-60                 .................KKFFATVEG..Q.GQSFEVPVFATSLEEANELAEWQYVPA.GFAVTRIRPD........
A0A1B0TRA2_9CAUD/6-51              .................KKYIVELEG..R.VQSFEVPVYAKSLDEATLKSQE-YEDA.GFVVGRIRPE........
A0A384X1C8_9CAUD/8-53              .................KKYIVELEG..R.VQSFDVPVYAKSLDEATLKAQE-YEDA.GFVVGRIRPE........
A0A2U7NJP5_9CAUD/2-50              .................KGFKAQVKQ..Q.GEIEEVTIYAVDIDDALEKAERAFGPQ.--NVTRVR--tmvapd..
A0A2Z4QIN7_9CAUD/2-42              .................KLFKAEVGN..E.----WVPIYAKDLDEALALAEEEYGAA.--AVGRVRPE........
A0A385IFS6_9CAUD/5-52              .................KKFYVTIQS..PlGGECEFPMYAESLDEATKQADFEYEQA.GFPVSRIRPE........
A0A8F2JCZ4_9CAUD/6-51              .................KKYIVELEG..R.VQSFEVPVYAKSLDEATLKSQE-YEDA.GFVVGRIRPE........
A0A2K9VK20_9CAUD/14-60             .................KKFWATVES..S.EHSFEVPIYAETLDEALELAEWQYVPA.GFEVTRVRPC........
A0A192YC04_9CAUD/22-68             .................KKFVVSLEG..S.AHAIEVPIYAKSLDEALELAEWTYTEA.GFEVTRVRPA........
A0A7S6KWQ5_9CAUD/4-53              .................KKYIIHYTSpyS.DYEMTMPIFAADIESAAEWAEETLEKDnCLTVTRIRPA........
A0A088FBS1_9CAUD/14-60             .................KKFRATVES..S.EHSFEVPIYAETLDEAVELAEWQYVPA.GFEVTRVRPC........
A0A0S2MVT7_9CAUD/9-53              .................KLFKATVKV..R.GEIEEVPVWAESIETALEAADLTYGED.--NVYRLRPE........
A0A1B2AN88_9CAUD/9-49              .................KLFKAEVHG..Q.----WVPVWARNVDEALEAAELEYGPE.--NVGRVRPE........
A0A192Y930_9CAUD/37-83             .................KKFWATVES..S.EHSFEVPIYAETLDEAVELAEWQYVPA.GFEVTRVRPC........
A0A2D3QNX2_9CAUD/12-57             .................KKYIVELEG..R.VQSFEVPVYAKSLEEATLKSQE-YEDA.GFVVGRIRPE........
A0ZXI8_9CAUD/14-60                 .................KKFFATVEG..Q.GQSFEVPVFAASLEEANELAEWQYVPA.GFAVTRIRPD........
A0A0D3QHF0_9CAUD/14-60             .................KKFFATVEG..Q.GQSFEVPVFAVSLEEANELAEWQYVPA.GFAVTRIRPD........
E9KIE8_9CAUD/2-42                  .................KLFKAQVGS..E.----WVPIYAKDLDEALALAEEEYGAA.--AVGRVKPE........
#=GC seq_cons                      .................KKFhsTlEu..p.spSaEVPVaAcSL-EAh-hAEhpYtsA.GFsVsRlRP-........
//
DBGET integrated database retrieval system