GenomeNet

Database: Pfam
Entry: RTBV_P12
LinkDB: RTBV_P12
Original site: RTBV_P12 
#=GF ID   RTBV_P12
#=GF AC   PF06361.7
#=GF DE   Rice tungro bacilliform virus P12 protein
#=GF AU   Moxon SJ
#=GF SE   Pfam-B_14960 (release 9.0)
#=GF GA   25.00 25.00;
#=GF TC   27.30 60.90;
#=GF NC   23.40 18.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   2041739
#=GF RT   An analysis of the sequence of an infectious clone of rice
#=GF RT   tungro bacilliform virus, a plant pararetrovirus. 
#=GF RA   Hay JM, Jones MC, Blakebrough ML, Dasgupta I, Davies JW, Hull R; 
#=GF RL   Nucleic Acids Res 1991;19:2615-2621.
#=GF DR   INTERPRO; IPR009417;
#=GF CC   This family consists of several Rice tungro bacilliform virus
#=GF CC   P12 proteins. The function of this family is unknown [1].
#=GF SQ   13
#=GS Q9YRV8_9VIRU/1-110  AC Q9YRV8.1
#=GS Q8QRL2_9VIRU/1-76   AC Q8QRL2.1
#=GS Q8QRL3_9VIRU/1-34   AC Q8QRL3.1
#=GS I6NWX8_9VIRU/1-112  AC I6NWX8.1
#=GS Q9WQX7_9VIRU/1-110  AC Q9WQX7.1
#=GS Q77RL9_9VIRU/1-110  AC Q77RL9.1
#=GS Q9YRV5_9VIRU/1-110  AC Q9YRV5.1
#=GS J7K3B5_9VIRU/1-111  AC J7K3B5.1
#=GS P2_RTBVP/1-110      AC P27499.1
#=GS Q8V6W1_9VIRU/1-110  AC Q8V6W1.1
#=GS Q9WQY3_9VIRU/1-110  AC Q9WQY3.1
#=GS Q91DT4_9VIRU/1-111  AC Q91DT4.1
#=GS O90300_9VIRU/1-110  AC O90300.1
Q9YRV8_9VIRU/1-110             .MSADYPTFKESLEKFQ.NLESDTAAKDKFNWVFTLENIKTTADVNLASKGLVQLYALQEIDKKINNLTAQVSKLPTTSGSG.SAGAIVPAGSNTQGQYKAPPKKGIKRKYPA.
Q8QRL2_9VIRU/1-76              g----------------.--------------------IKTTADVNLASKGLVQLCALQEIDKKINNLSAQVGKIPTTSGSSsSAGAIVPAGSNTQGQYKAPPKKGIKRKYP-g
Q8QRL3_9VIRU/1-34              .MSADYPTFKEALEKFK.DLESETANKDKFGWVFTL----------------------------------------------.------------------------------.
I6NWX8_9VIRU/1-112             .MSADYPTFKEALEKFKeDLESETANKDKFGWVFTLQGMKTTADVNLASKGLVQLYALQEIDKKINNLSAQVGKIPTTSGSSsSAGAIVPAGSNTQGQYKAPPKKGIKRKYP-g
Q9WQX7_9VIRU/1-110             .MSADYPTFKEALEKFK.NLESDTASKDKFNWVFTLENIKTTADVNLASKGLVQLYALQEIDKKINNLTAQVSKLPTTSGSS.SAGAIVPAGSNTQGQYKAPPKKGIKRKYPA.
Q77RL9_9VIRU/1-110             .MSADYPTFKEALEKFK.NLESDTAGKDKFNWVFTLENIKSAADVNLASKGLVQLYALQEIDKKINNLTTQVSKLPTTSGSS.SAGAIVPAGSNTQGQYKAPPKKGIKRKYPA.
Q9YRV5_9VIRU/1-110             .MSADYPTFKEALEKFQ.NLESDTAAKDKFNWVFNLENIKTTADVNLASKGLVQLYALQEIDKKINNLTAQVSKLPTTSGSS.SAGAIVPAGSNTQGQYKAPPKKGIKRKYPA.
J7K3B5_9VIRU/1-111             .MSADYPTFKEALEKFK.DLESETANKDKFGWVFTLQGIKTTADVNLASKGLVQLYALQEIDKKINHLSAQVGKIPTTSGSSsSAGAIVPAGSNTQGQYKAPPKKGIKRKYP-g
P2_RTBVP/1-110                 .MSADYPTFKEALEKFK.NLESDTAGKDKFNWVFTLENIKSAADVNLASKGLVQLYALQEIDKKINNLTTQVSKLPTTSGSS.SAGAIVPAGSNTQGQYKAPPKKGIKRKYPA.
Q8V6W1_9VIRU/1-110             .MSADYPTFKEALEKFK.NLESDTAAKDKFNWVFTLENIKTTADVNLASKGLVQLYALQEIDKKINNLTAQVSKLPTTSGSS.SAGTIVPAGSNTQGQYKAPPKKGIKRKYPA.
Q9WQY3_9VIRU/1-110             .MSADYPTFKEALEKFK.NLESDTVSKDKFNWVFTLENIKTTADVNLASKGLVQLYALQEIDKKINNLTAQVSKLPTTSGSS.SAGAIVPAGSNTQGQYKAPPKKGIKRKYPA.
Q91DT4_9VIRU/1-111             .MSADYPTFKEALEKFK.DLESETANKDKFGWVFTLQGIKTTADVNLASKGLVQLYALQEIDKKINNLSAQVGKIPTTSGSSsSAGAIVPAGSNTQGQYKAPPKKGIKRKYP-g
O90300_9VIRU/1-110             .MSADYPTFKEALEKFK.NLESDTAAKDKFNWVFTLENIKTTADINLASKGLVQLYALQEIDKTDDILTTQVSKLPTTSGIS.SAGAIVPAGSNTQGQYKAPPKKGIKRKYPA.
#=GC seq_cons                  .MSADYPTFKEALEKFK.NLESDTAuKDKFNWVFTLENIKTTADVNLASKGLVQLYALQEIDKKINNLTAQVSKLPTTSGSS.SAGAIVPAGSNTQGQYKAPPKKGIKRKYPA.
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