GenomeNet

Database: Pfam
Entry: Synaptonemal_3
LinkDB: Synaptonemal_3
Original site: Synaptonemal_3 
#=GF ID   Synaptonemal_3
#=GF AC   PF15191.5
#=GF DE   Synaptonemal complex central element protein 3
#=GF AU   Eberhardt RY, Coggill P, Hetherington K
#=GF SE   Jackhmmer:A1L190
#=GF GA   27.00 27.00;
#=GF TC   56.70 56.60;
#=GF NC   24.40 23.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 26740544 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Synaptonemal_complex
#=GF DR   INTERPRO; IPR028145;
#=GF SQ   60
#=GS A0A0Q3WRS6_AMAAE/1-85     AC A0A0Q3WRS6.1
#=GS H2RBX9_PANTR/1-85         AC H2RBX9.1
#=GS A0A091QKY7_9GRUI/1-80     AC A0A091QKY7.1
#=GS A0A091W3T1_OPIHO/1-83     AC A0A091W3T1.1
#=GS A0A091LUL9_CATAU/1-83     AC A0A091LUL9.1
#=GS G3IM77_CRIGR/1-85         AC G3IM77.1
#=GS S9XNJ1_CAMFR/6-90         AC S9XNJ1.1
#=GS A0A091KUJ2_9GRUI/1-83     AC A0A091KUJ2.1
#=GS R4GBT4_ANOCA/1-85         AC R4GBT4.1
#=GS A0A087RJU4_APTFO/1-83     AC A0A087RJU4.1
#=GS A0A091M970_CARIC/1-82     AC A0A091M970.1
#=GS W5QFA2_SHEEP/1-84         AC W5QFA2.1
#=GS SYCE3_MOUSE/1-85          AC B5KM66.1
#=GS SYCE3_MOUSE/1-85          DR PDB; 4R3Q A; 13-85;
#=GS SYCE3_MOUSE/1-85          DR PDB; 4R3Q B; 12-85;
#=GS B3DHF5_DANRE/1-91         AC B3DHF5.1
#=GS A0A099YY10_TINGU/1-83     AC A0A099YY10.1
#=GS A0A091J2X0_9AVES/1-83     AC A0A091J2X0.1
#=GS R7VS22_COLLI/1-85         AC R7VS22.1
#=GS A0A093JE73_FULGA/1-83     AC A0A093JE73.1
#=GS L9JFD6_TUPCH/1-85         AC L9JFD6.1
#=GS G1U293_RABIT/1-85         AC G1U293.1
#=GS H0XKE1_OTOGA/1-85         AC H0XKE1.1
#=GS A0A091U227_PHORB/1-83     AC A0A091U227.1
#=GS A0A091P9H8_HALAL/1-83     AC A0A091P9H8.1
#=GS H1A4T8_TAEGU/1-83         AC H1A4T8.1
#=GS W5KM33_ASTMX/1-92         AC W5KM33.1
#=GS G3MY06_BOVIN/1-85         AC G3MY06.1
#=GS A0A093J8H8_EURHL/1-80     AC A0A093J8H8.1
#=GS D3ZDD6_RAT/1-85           AC D3ZDD6.1
#=GS G5E7G0_LOXAF/1-73         AC G5E7G0.1
#=GS A0A093HFY7_STRCA/1-83     AC A0A093HFY7.1
#=GS G7PG76_MACFA/1-85         AC G7PG76.1
#=GS J9P675_CANLF/1-85         AC J9P675.1
#=GS F7H7Y4_CALJA/1-85         AC F7H7Y4.1
#=GS S7MX27_MYOBR/1-85         AC S7MX27.1
#=GS A0A099ZZY7_CHAVO/1-83     AC A0A099ZZY7.1
#=GS SYCE3_HUMAN/1-85          AC A1L190.1
#=GS M7AQF4_CHEMY/1-85         AC M7AQF4.1
#=GS A0A093PEI7_9PASS/1-83     AC A0A093PEI7.1
#=GS G5B2G1_HETGA/1-83         AC G5B2G1.1
#=GS A0A091F6F7_CORBR/1-82     AC A0A091F6F7.1
#=GS I3NHA5_ICTTR/1-85         AC I3NHA5.1
#=GS H3A163_LATCH/1-85         AC H3A163.1
#=GS F6PQ54_HORSE/1-84         AC F6PQ54.1
#=GS A0A091NN20_APAVI/1-83     AC A0A091NN20.1
#=GS G3QK37_GORGO/1-85         AC G3QK37.1
#=GS A0A0D9QXN7_CHLSB/1-85     AC A0A0D9QXN7.1
#=GS G1PYV3_MYOLU/1-85         AC G1PYV3.1
#=GS D2H6D0_AILME/1-85         AC D2H6D0.1
#=GS A0A093TK13_PHACA/1-83     AC A0A093TK13.1
#=GS A0A091HQ25_CALAN/1-83     AC A0A091HQ25.1
#=GS L5K7L9_PTEAL/1129-1211    AC L5K7L9.1
#=GS A0A091SPG8_9AVES/1-83     AC A0A091SPG8.1
#=GS A0A093HH82_GAVST/1-83     AC A0A093HH82.1
#=GS A0A096NL54_PAPAN/1-85     AC A0A096NL54.1
#=GS L5LG90_MYODS/1-85         AC L5LG90.1
#=GS A0A091GTA4_9AVES/1-83     AC A0A091GTA4.1
#=GS F1RXU0_PIG/1-85           AC F1RXU0.2
#=GS M3WXL6_FELCA/1-85         AC M3WXL6.1
#=GS A0A151P6G9_ALLMI/108-192  AC A0A151P6G9.1
#=GS A0A093GIT3_PICPB/1-68     AC A0A093GIT3.1
A0A0Q3WRS6_AMAAE/1-85                ........MAEAEVQEGNYDNMVKMVEELKRDLEKLLDEMEKLTVGATWMAFDMVVMRTNLDLANSMKRLEDAFLSCK-------EEIEKKWQEVLME--fk........
H2RBX9_PANTR/1-85                    ........MDDADPEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFVNCK-------EEMEKNWQELLHETK..........
A0A091QKY7_9GRUI/1-80                ........MAEKEPQEGNYDNMVKMMEDLNRDLEKLLEEMEKLTVQAAWMAYEMVVIRTNPDLANSMSHLEEAFLSCK-------EEMDKKWQEV-----..........
A0A091W3T1_OPIHO/1-83                ........MAESEPQEGNYDDMVKMVQDLNEDLEKLLEEMEKLTVQAAWMAYDMVVIRTNPDLANSMRRLEDAFLSCK-------EEMEKKWQEALS---e.........
A0A091LUL9_CATAU/1-83                ........MAESEPQEGNYDNMVKMVEDLNRDLEKLLEEMEKLTVQATWMAYDMVVIRTNPDLANSMRRLEDAFLSCK-------EEMEKKWQEVLSE--..........
G3IM77_CRIGR/1-85                    ........MADSDPGERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK-------EEMEKNWQELLTETK..........
S9XNJ1_CAMFR/6-90                    ........MADSDPGERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK-------EEMEKNWQELLSETK..........
A0A091KUJ2_9GRUI/1-83                ........MAKSEPQQGNNDNMVKIVEDLNSDLEKLLEEMEKLTVQATWMAYDMVVIRTNPDLASSMRRLEDAFLSCK-------EEMAKKWQEV-----pve.......
R4GBT4_ANOCA/1-85                    ........MAKCETYERNYDNIVKQLEDLNRDLEKLLEDMEKLSVQATWMAYDMVVMRANPELANSMRRLEDAFLTCK-------EEMERNWQEMLKETK..........
A0A087RJU4_APTFO/1-83                ........MAESEPQERNYDNMVKMVEDLNRDLEKLLEEMEKLTVQATWMAYDMVVIRTNPDLANSMRRLEDAFLSCK-------EEMEKKWQEVLMD--..........
A0A091M970_CARIC/1-82                ........MAESEPQEGNYDNMVKMVEDLNRDLEKLLEQIEKLTVQATWMAYDMVVIRTNPDLANSMRHLEDAFLSCKEE--------------------mkkwqeelme
W5QFA2_SHEEP/1-84                    ........MADPGPGERSYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPALAEAMRRAGGGLPR-K-------EEMEKKWQELLSE--ar........
SYCE3_MOUSE/1-85                     ........MADSDPGERSYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK-------EEMEKNWQELLTETK..........
#=GR SYCE3_MOUSE/1-85          SS    ........XXXXXXXXXXX-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHT-..........
B3DHF5_DANRE/1-91                    ........MSGGLSDVQLCEDFSSESLQLNQHLEKMTEQMEDVSVKLSCMTYDMVVLRTSPDLAESFKSLENEFQKCKAVLCGLTDGQEVKCHP--ADE-eq........
A0A099YY10_TINGU/1-83                ........MAKSEPWEKNYDSMVKMVEDLNKDLEKLLEEMEKLSVQATWMAYDMVVMRTNPDLATSMRRLEDAFLNCK-------DEMEKKWQEVLR---e.........
A0A091J2X0_9AVES/1-83                ........MAESEPQEGNYDNMVKMVEDLNRDLEKLLEEMEKLTVQATWMAYDMVVIRTNPDLANSMRRLEDAFLSCK-------EEMEKKWQEVLM---e.........
R7VS22_COLLI/1-85                    ........MAESEAQAGNYDNMVKMVEDLSKDLEKLLEEIEKLTVQATWMAYDMVVMRTNPHLSNSMRRLEDAFLSCK-------EEMEKKWQEVLSE--yk........
A0A093JE73_FULGA/1-83                ........MAESEPQEGNYDNMVKMVEDLNRDLEKLLEEMEKLTVQATWMAYDMVVIRTNPDLANSMRRLEDAFLSCK-------EEMEKKWQEVLM---e.........
L9JFD6_TUPCH/1-85                    ........MADSDSGGKNYDSMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK-------EEMEKKWQELLAETK..........
G1U293_RABIT/1-85                    ........MADSDPGERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK-------EEMEKNWQEMLRETK..........
H0XKE1_OTOGA/1-85                    ........MADSDSGERSYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVIRTNPMLAESMRRLEDAFLNCK-------EEMEKNWQELLNETK..........
A0A091U227_PHORB/1-83                ........MAESEPQEGNYDNMVKMVEDLNRDLEKLLEEMEKLTVQATWMAYDMVVMRTNPDLANSMRRLEEAFLSCK-------EEMEKKWQEVLSE--..........
A0A091P9H8_HALAL/1-83                ........MAESEPQEGNYDNMVKMVEDPNRDLEKLLEEMEKLTVQAAWMAYDMVVIRTNPDLANSMRRLEDAFLSCK-------EEMEKKWQEVLM---e.........
H1A4T8_TAEGU/1-83                    ........MDESESQKENYYNEGKMVENFNMDMEELLDEMEKLTVRAAWMAYDYVAIQTNPGPYNAMQHLEDAFLMCK-------EQMEKKWQEVL----le........
W5KM33_ASTMX/1-92                    ........MVDGSSSGEQHADFGRESLQLNKDLEKMTEQMENVSVHLTWMAYDMVVLRTNPQLAKSLRRLEDEYLKCKAVICSSADKDNAAVHSVTGDQE..........
G3MY06_BOVIN/1-85                    ........MADPDPGERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPALAESMRRLEDAFLNCK-------EEMEKKWQELLSEA-k.........
A0A093J8H8_EURHL/1-80                ........MAESQPQEGNYGSLVKMVEDLNRDLEKHLEEMEKLTVQVTCMAYDMVVMRTNPDLAKSMKRLEGAFLSCK-------EEMEKKWQEV-----..........
D3ZDD6_RAT/1-85                      ........MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK-------EEMEKNWQELLTETK..........
G5E7G0_LOXAF/1-73                    ........MADSDPGDRNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVIRTNPTLADSMRRLEDAFFNCK----------------------eem.......
A0A093HFY7_STRCA/1-83                ........MAKSEPQERNYDNMVKMVEDLNRDLEKLLEEMEKLSVQATWMAYDMVVMRTNPDLANSMRRLEDAFLNCK-------EEMEKKWQEVLKE--..........
G7PG76_MACFA/1-85                    ........MADADPEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFVNCK-------EEMEKNWQELLHETK..........
J9P675_CANLF/1-85                    ........MADSEPGERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK-------EEMEKNWQELLNETK..........
F7H7Y4_CALJA/1-85                    ........MADADAEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPMLAESMRRLEDAFLNCK-------QEMEKNWQELLHETK..........
S7MX27_MYOBR/1-85                    ........MAESDPGERNCDNMLKMLSDLNKDLEKILEEMEKISVQATWMAYDMVVIRTNPTLAESMRRLEDAFLNCK-------EEMEKNWQELLSETK..........
A0A099ZZY7_CHAVO/1-83                ........MAESEPQEGNYDNMVKMVEDLNRDLEKLLEEMEKLTVQATWMAYDMVVIRTNPDLSNSMRRLEDAFLSCK-------EEIEKKWQDV-----qie.......
SYCE3_HUMAN/1-85                     ........MDDADPEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFVNCK-------EEMEKNWQELLHETK..........
M7AQF4_CHEMY/1-85                    ........MAKSEPRERNYDNMVKMLEDLNRDLEKLLEEMEKLSVQATWMAYDMVVMRTNPDLANSMRRLEDAFLNCK-------EEMEKNWQEMLKETK..........
A0A093PEI7_9PASS/1-83                ........MAEAEPQEENCENSIEMMEKCNKDLETLLEEMEKITVRAAWMTYGIVTIHTNPDLASSMKHLEDAFLRCK-------EQVGRKWQEVL----ke........
G5B2G1_HETGA/1-83                    .......m---ADPGERNYDNMLRMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTDPALAEFMHRLEDAFLNCK-------EEMEKSRQELLSETK..........
A0A091F6F7_CORBR/1-82                maesefqq---------GNNDDGKTRENFKKSTEELLEKMENLTVWATQIVYDCTAIRTNPALTTTMQHLEDAFLRCK-------EHMEKKRQEVLM---e.........
I3NHA5_ICTTR/1-85                    ........MADSDPGERNYDNMLRMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK-------EEMEKNWQELLSETK..........
H3A163_LATCH/1-85                    .......m-AESELCEKKHDNILKMLCDLNRDLEKMLEDIEKISVQTTWMAYDMVVMRTNPALTDSMKKLEEAFLNCK-------EEVERNWQEMLSETK..........
F6PQ54_HORSE/1-84                    ........MADSDPGERNYDNMLKMLSDLN-DLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK-------EEMEKNWQELLSET-t.........
A0A091NN20_APAVI/1-83                ........MAETEPQEENYDNMVKMVEDMNGDLEKLLEEIEKLTVQASWMAYDMVVLRTSPDLTNIMRCLEDAFLRCKEEIQKM----------------sqevlne...
G3QK37_GORGO/1-85                    ........MDDADPEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFVNCK-------EEMEKNWQELLHETK..........
A0A0D9QXN7_CHLSB/1-85                ........MADADPEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFVSCK-------EEMEKNWQELLHETK..........
G1PYV3_MYOLU/1-85                    ........MAESDPGERNCDNMLKMLSDLNKDLEKILEEMEKISVQATWMAYDMVVIRTNPTLAESMRRLEDAFLNCK-------EEMEKNWQELLSETK..........
D2H6D0_AILME/1-85                    ........MADSDPGERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVIRTNPGLAESMRRLEDAFLNCK-------EEMEKNWQELLNETK..........
A0A093TK13_PHACA/1-83                ........MAESEPQEANYDNMVKTVEDLNRDLEKLLEEVEKLTVQATWMAYDMVVIRTNPDLANSMRCLEDAFLSCK-------EEMEKKWQEAL----me........
A0A091HQ25_CALAN/1-83                ........MAESEPREENYDDMVKMVEDLNRDLEKVLEEMEKLTVQATWMAYDMVVIRTNPHLADSMRRLEAAFLQCK-------EEMEKKWQEVLSE--..........
L5K7L9_PTEAL/1129-1211               ........--DSDPGERNYDNILKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAEAMRRLEDAFLNCK-------EEMEKNWQELLRET-a.........
A0A091SPG8_9AVES/1-83                ........MAKSEPWEENYDTMVKMVQLLNRDLENLLEEVEKLTVQATWMAYDMVVMRTNPDLANSMRRLEDAFLSCK-------EEVEKKWQEVLTE--..........
A0A093HH82_GAVST/1-83                ........MAESEPQEGNYDPTIKMVEDLNRDLEKLLEEMEKLTVQATWMAYGMVVIRTNPDLASSMRRLEDAFLSCK-------EEVEKNWQEVLKE--..........
A0A096NL54_PAPAN/1-85                ........MADADPEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFVNCK-------EEMEKNWQELLHETK..........
L5LG90_MYODS/1-85                    ........MAESDPGERNCDNMLKMLSDLNKDLEKILEEMEKISVQATWMAYDMVVIRTNPALAESMRRLEDAFLNCK-------EEMEKNWQELLSETK..........
A0A091GTA4_9AVES/1-83                ........MAESEPQEENYDNMLKVVEDLNRDLEKLLEEMEKLTVQAAWMAYDMVVLRTNPDLANSMRHLEDAFLSCK-------EEIKKKWQEVLTD--..........
F1RXU0_PIG/1-85                      ........MAESDPGERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWLAYDMVVTRTNPTLAESMRRLEDAFLNCK-------EEMEKNWQELLSETK..........
M3WXL6_FELCA/1-85                    ........MADSDPGERNYDDMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK-------EEMEKNWQELLTETK..........
A0A151P6G9_ALLMI/108-192             ........MAKSEPQERNCDNMVKMLEDLNRDLEKLLEEMEKLSVQATWMAYDMVVMRTNPDLANSMRRLEDAFLNCK-------EEMEKNWQEMLKETK..........
A0A093GIT3_PICPB/1-68                ......qe--------GNSEKMVKLMEDLNRDLEKLLEEMESLTVQATWMAYGVVVLRTNPDLASSMRCLEDAFLSCKE---------------------eie.......
#=GC SS_cons                         ........XXXXXXXXXXX-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHT-..........
#=GC seq_cons                        ........MA-S-PtEcNYDNMlKMlpDLN+DLEKLLEEMEKlSVQATWMAYDMVVhRTNPsLApSMRRLEDAFLsCK.......EEMEKpWQElLpE............
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