GenomeNet

Database: Pfam
Entry: Synaptonemal_3
LinkDB: Synaptonemal_3
Original site: Synaptonemal_3 
#=GF ID   Synaptonemal_3
#=GF AC   PF15191.1
#=GF DE   Synaptonemal complex central element protein 3
#=GF AU   Eberhardt RY, Coggill P, Hetherington K
#=GF SE   Jackhmmer:A1L190
#=GF GA   27.00 27.00;
#=GF TC   67.30 67.20;
#=GF NC   23.10 19.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Synaptonemal_complex
#=GF SQ   24
#=GS G1U293_RABIT/1-86  AC G1U293.1
#=GS F7H7Y4_CALJA/1-86  AC F7H7Y4.1
#=GS H3A163_LATCH/1-86  AC H3A163.1
#=GS D3ZDD6_RAT/1-86    AC D3ZDD6.1
#=GS G3QK37_GORGO/1-86  AC G3QK37.1
#=GS H2RBX9_PANTR/1-86  AC H2RBX9.1
#=GS B3DHF5_DANRE/1-95  AC B3DHF5.1
#=GS SYCE3_MOUSE/1-86   AC B5KM66.1
#=GS G1PYV3_MYOLU/1-86  AC G1PYV3.1
#=GS F1RXU0_PIG/1-86    AC F1RXU0.1
#=GS Q4RNB1_TETNG/1-70  AC Q4RNB1.1
#=GS E7D6R1_MOUSE/1-86  AC E7D6R1.1
#=GS G3IM77_CRIGR/1-86  AC G3IM77.1
#=GS SYCE3_HUMAN/1-86   AC A1L190.1
#=GS H1A4T8_TAEGU/1-83  AC H1A4T8.1
#=GS G5B2G1_HETGA/1-84  AC G5B2G1.1
#=GS H9ES48_MACMU/1-86  AC H9ES48.1
#=GS D2H6D0_AILME/1-86  AC D2H6D0.1
#=GS G7PG76_MACFA/1-86  AC G7PG76.1
#=GS H0XKE1_OTOGA/1-86  AC H0XKE1.1
#=GS G7N4F5_MACMU/1-86  AC G7N4F5.1
#=GS F6PQ54_HORSE/1-85  AC F6PQ54.1
#=GS G3MY06_BOVIN/1-86  AC G3MY06.1
#=GS G5E7G0_LOXAF/1-73  AC G5E7G0.1
G1U293_RABIT/1-86             ...MADSDPGERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK---------EEMEKNWQEMLRETK-p.......
F7H7Y4_CALJA/1-86             ...MADADAEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPMLAESMRRLEDAFLNCK---------QEMEKNWQELLHETKQ........
H3A163_LATCH/1-86             mae---SELCEKKHDNILKMLCDLNRDLEKMLEDIEKISVQTTWMAYDMVVMRTNPALTDSMKKLEEAFLNCK---------EEVERNWQEMLSETK-g.......
D3ZDD6_RAT/1-86               ...MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK---------EEMEKNWQELLTETKR........
G3QK37_GORGO/1-86             ...MDDADPEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFVNCK---------EEMEKNWQELLHETKQ........
H2RBX9_PANTR/1-86             ...MDDADPEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFVNCK---------EEMEKNWQELLHETKQ........
B3DHF5_DANRE/1-95             ...MSGGLSDVQLCEDFSSESLQLNQHLEKMTEQMEDVSVKLSCMTYDMVVLRTSPDLAESFKSLENEFQKCKAVLCGLTDGQEVKCHPADEEQVSPK........
SYCE3_MOUSE/1-86              ...MADSDPGERSYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK---------EEMEKNWQELLTETKR........
G1PYV3_MYOLU/1-86             ...MAESDPGERNCDNMLKMLSDLNKDLEKILEEMEKISVQATWMAYDMVVIRTNPTLAESMRRLEDAFLNCK---------EEMEKNWQELLSETK-h.......
F1RXU0_PIG/1-86               ...MAESDPGERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWLAYDMVVTRTNPTLAESMRRLEDAFLNCK---------EEMEKNWQELLSETKR........
Q4RNB1_TETNG/1-70             ..m------------------SELTEDLERMTEHTEKMSLQLTWMAHDLVVLRASPELASSMRKLEDAYRGCRAAVCGLPEP----------------dkspaapg
E7D6R1_MOUSE/1-86             ...MADSDPGERSYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK---------EEMEKNWQELLTETKR........
G3IM77_CRIGR/1-86             ...MADSDPGERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK---------EEMEKNWQELLTETKR........
SYCE3_HUMAN/1-86              ...MDDADPEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFVNCK---------EEMEKNWQELLHETKQ........
H1A4T8_TAEGU/1-83             ...MDESESQKENYYNEGKMVENFNMDMEELLDEMEKLTVRAAWMAYDYVAIQTNPGPYNAMQHLEDAFLMCK---------EQMEKKWQEVL-----le......
G5B2G1_HETGA/1-84             ..m---ADPGERNYDNMLRMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTDPALAEFMHRLEDAFLNCK---------EEMEKSRQELLSETKR........
H9ES48_MACMU/1-86             ...MADADPEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFVNCK---------EEMEKNWQELLHETKQ........
D2H6D0_AILME/1-86             ...MADSDPGERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVIRTNPGLAESMRRLEDAFLNCK---------EEMEKNWQELLNETKR........
G7PG76_MACFA/1-86             ...MADADPEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFVNCK---------EEMEKNWQELLHETKQ........
H0XKE1_OTOGA/1-86             ...MADSDSGERSYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVIRTNPMLAESMRRLEDAFLNCK---------EEMEKNWQELLNETKR........
G7N4F5_MACMU/1-86             ...MADADPEERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFVNCK---------EEMEKNWQELLHETKQ........
F6PQ54_HORSE/1-85             ...MADSDPGERNYDNMLKMLSDLN-DLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK---------EEMEKNWQELLSETT-r.......
G3MY06_BOVIN/1-86             ...MADPDPGERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPALAESMRRLEDAFLNCK---------EEMEKKWQELLSEAK-r.......
G5E7G0_LOXAF/1-73             ...MADSDPGDRNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVIRTNPTLADSMRRLEDAFFNCK-------------------------eem.....
#=GC seq_cons                 ...MADuDPsERNYDNMLKMLSDLNKDLEKLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCK.........EEMEKNWQELLpETKp........
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