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Database: Pfam
Entry: T4_tail_cap
LinkDB: T4_tail_cap
Original site: T4_tail_cap 
#=GF ID   T4_tail_cap
#=GF AC   PF11091.5
#=GF DE   Tail-tube assembly protein
#=GF AU   Pollington J, Finn RD
#=GF SE   PRODOM
#=GF GA   20.20 20.20;
#=GF TC   21.00 350.50;
#=GF NC   19.70 18.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   2139268
#=GF RT   Expression and regulation of genes coding for three
#=GF RT   bacteriophage T4 tail tube-associated proteins. 
#=GF RA   Ishimoto LK, Elisha J, Eiserling FA; 
#=GF RL   Virology. 1990;175:586-590.
#=GF DR   INTERPRO; IPR024389;
#=GF CC   This tail tube protein is also referred to as Gp48. It is
#=GF CC   required for the assembly and length regulation of the tail tube
#=GF CC   of bacteriophage T4 [1].
#=GF SQ   2
#=GS BP48_BPT4/3-358      AC P13339.3
#=GS Q6WHH2_BPKVM/12-342  AC Q6WHH2.1
BP48_BPT4/3-358                 iv--KEI---TADLIKKS-GEKISAGQSTKSE..VGTKTYTAQFPTGRASGNDTTedFQVTDLYKNGLLFTAYNMSSRDSGSLRSMRSnySSSSSSILRTARNTISSTVSKLSnglisnnnSGTISKSPIANILLPRSKSDVDTSSHRFND.....VQESLISRGGGTATGVLSN.......IASTAVFGALESITQGIMAD.........NNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDDWYRSTLIEPLSPEDAAKNKTLFEKMT.SSLTNVLVVSNPTVWMVKNFGATSKF.DGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRAS
Q6WHH2_BPKVM/12-342             ..KQSDTLDRVLSFDGGVESSTTEITQDTDQGrvSTSNIVALTYPPNLGARSG--..------HSNFFIFRAYDLASTTKQHYTDMRQ..SFTASSKESKQASEIPSEL----........------MATMALYAP---NLVEEVSHEYDKtptsvLNDFLAAAATAAGADTVSQgveagkkAVATAAGATLAQIKRSFIQSnaagqleknSSVVTDNVTVTAYKGTAQRQQTLMYQFHPKSLDELKIVGEVIKTFYRLSL----------PVKGQISSDLLDTG-----------NAALGSGFSnGFAKYATLLKTPPVWMIEEVSDVDATrYTPRFVFGPAGITSVKLNRTPDQYWRTFRGTAGDPAGIELEVTFTELIPMDRAM
#=GC seq_cons                   ....p-h...shsh.tts.upphphsQsTcpt..ssophhshpaPsshuutss..........apNhhlFpAYshuSpsptphpsMRp..S.ouSSh.ppttspIsSpl...................shhslhhP...s.V-psSHcasc.....lp-.LhutususussslSp.......hsuTAshusLtpIppuhhts.........ss..h.ssshohYtGstpRppshhaphpP+Sh--LhhlhplhphF.hhSh...........lKG.lss.hhsTh...........NtsLhptho.u.hp.shllpsPsVWMlcphusssth..s.p.lFGPstIpSl+hs+TPst.apshthsss.PushpLElThpElIshsRA.
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