GenomeNet

Database: Pfam
Entry: TagA
LinkDB: TagA
Original site: TagA 
#=GF ID   TagA
#=GF AC   PF12561.5
#=GF DE   ToxR activated gene A lipoprotein
#=GF AU   Gavin OL
#=GF SE   Prosite
#=GF GA   25.00 25.00;
#=GF TC   26.50 25.40;
#=GF NC   23.00 20.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR022218;
#=GF CC   This domain family is found in bacteria, and is approximately
#=GF CC   140 amino acids in length. The family is found in association
#=GF CC   with Pfam:PF10462. There is a conserved GAG sequence motif. This
#=GF CC   family is a bacterial lipoprotein.
#=GF SQ   6
#=GS F7YIK1_VIBA7/728-861  AC F7YIK1.1
#=GS Q9KN18_VIBCH/811-946  AC Q9KN18.1
#=GS Q7MCP9_VIBVY/723-856  AC Q7MCP9.1
#=GS K1RMT1_CRAGI/74-157   AC K1RMT1.1
#=GS TAGA_VIBCH/843-974    AC P0C6Q7.1
#=GS TAGA_VIBCH/597-731    AC P0C6Q7.1
F7YIK1_VIBA7/728-861             .......FELPQPEQGDYQLEGW.QAVANLTQAQLDSDIWQTLRIDGEQQRLCKFTFQAANGDRSQFVGGVEP...STDRCSVGRDVTWNIN...VNMTSAQGEYELLSKYGRGTVTYTPTADVGEVSLCTLNKSGND..HDGAGFVVGN........
Q9KN18_VIBCH/811-946             .......FELPQPEQGEYQLEGW.QAAGDLTQAEIQYNQWQTLLIDGQQLPICRFDYTNTNGQSATFVGSLNA...QRNVCEGSRDMRWYND...YQIDSPVGQYELLSQFGAGNVTYTPNAEIGEVQLCTLNKPHNNgsHDGAGFVR--ng......
Q7MCP9_VIBVY/723-856             .......FELPQGVQGAFQPEGW.QPVADLTPAELESDSWQTLRMDGEQQRVCKFTFQAANGDSAVFVGGVDQ...STDRCSSGRDLQWHIN...SNMTSAQGDYELLSKYGRGAVTYTPTPEVGEVTLCTLNKSGTD..HDGAGFVVGN........
K1RMT1_CRAGI/74-157              ...tsak-----PLLTKSRSSGK.QDSDEIETLQENDDEFNDMRINSNSDETCDSVFQMSCDESPEVVTYYEA...QSRMCSRTSSAQ----...-------------------------------------------..----------iqvidenv
TAGA_VIBCH/843-974               tsyepkl------------PSGWfKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSD-REMKFVGYVSQlseSKYICTGGSEIYYKKNeinIELSSKENDFEWLSVRDKNLVGSKIEFD-NNKTLCVLDNRS--..FYGAGYLDEN........
TAGA_VIBCH/597-731               .......FDLEKP-RSESSLKGW.QYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI...ENKICTGGRSIHYLEDgkkNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSGT-..VYGAGFIKGN........
#=GC seq_cons                    .......F-L.pP.puc.p.cGW.Qsss-ls.tphpscpWpThRlsupppclC+FsFpsusGcpspFVGhl-t...pschCouGR-lpah.s....phsSt.s-YELLShhGcGtVoYsPss-lGEspLCoLspsus...a.GAGFlhtN........
//
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