#=GF ID   Totivirus_coat
#=GF AC   PF05518.6
#=GF DE   Totivirus coat protein
#=GF AU   Moxon SJ
#=GF SE   Pfam-B_10221 (release 8.0)
#=GF GA   25.00 25.00;
#=GF TC   34.70 34.60;
#=GF NC   19.90 19.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR008871;
#=GF SQ   23
#=GS Q98XW9_9VIRU/28-770  AC Q98XW9.1
#=GS A9ZNC8_9VIRU/15-778  AC A9ZNC8.1
#=GS A9UIB3_9VIRU/1-397   AC A9UIB3.1
#=GS G3C8V3_9VIRU/10-741  AC G3C8V3.1
#=GS Q1M2S1_9VIRU/18-766  AC Q1M2S1.1
#=GS E7BMY2_9VIRU/1-168   AC E7BMY2.1
#=GS Q60GI3_9VIRU/9-746   AC Q60GI3.1
#=GS Q99AT4_9VIRU/17-776  AC Q99AT4.1
#=GS Q83070_9VIRU/1-41    AC Q83070.1
#=GS Q9YXE5_9VIRU/15-789  AC Q9YXE5.1
#=GS Q6Q425_9VIRU/10-765  AC Q6Q425.1
#=GS Q6GYC1_9VIRU/17-776  AC Q6GYC1.1
#=GS CAPSD_HV19S/10-772   AC O57043.2
#=GS Q76L28_9VIRU/13-702  AC Q76L28.1
#=GS E7BBP6_9VIRU/10-757  AC E7BBP6.1
#=GS A4FRF5_9VIRU/10-762  AC A4FRF5.1
#=GS Q83072_9VIRU/8-713   AC Q83072.1
#=GS CAPSD_LRVLG/17-741   AC Q02358.1
#=GS Q83098_9VIRU/1-41    AC Q83098.1
#=GS E7BMY1_9VIRU/1-258   AC E7BMY1.1
#=GS Q8AZ67_9VIRU/15-773  AC Q8AZ67.1
#=GS Q83100_9VIRU/17-741  AC Q83100.1
#=GS Q9YXE7_9VIRU/67-833  AC Q9YXE7.1
Q98XW9_9VIRU/28-770             ....LLGEVVPGGARVEVPT...........FGNYRKYMSRLEMRACTRGLPQSTYCPIQFEVGAAFNlgtcaknfKRETWLQHVMREGPMLGCSYATPVE--------VRKVLKeerfrqvGQAEWLTFNFDAIVCVLGAVAATLTLVPD...L.--STADWRNTSPSVRGLVSVEDLHAANSGGVvyYDPCALG-IHAECAKWLMIYAANVCGATVVVPHLTLDVN-NRPICKDYDGAELRRGLSVLLNILGTYYSMANAGDMYALALMTGVHRVLTVVGHSDEGGWLRDVLRQGWWQQPHGGVPRSLP...FSSGISVDDGRTLGTFVALVDSIALGTAAAVAHCDPLVPVGDNVFPTVFTVDLPEDGELANGV.------MQRLMARTIADGCAKFSELYATALAKLFRLHVNVtELHAAGVLQQMASYFAESGS.--RHTDMAVCHPFFWIEPTTVLP.AGEFGFPAEIYGYASLCHA.TQRRTMPFFEAIEEEGLSDTV.VSHWRVRIRSPRTCGYVLYTTNHPKNGLANLLLRGFNSSALVLGT-K..........SPEEI.RCKKAAKGFVTFADLMWKRGQAKLPHPAEVLNVDGTFTVSILHAAIT.TRHYQKPiEHIPPPEDLSRMYLTLHATRLAYYK.AGPANVEPGGVRRLRNMGVDAIND------MNGVVQNTMLRMSSFPPPSET.APvlNKPGRAFGGAAAA.VSE.RCVEPVRGDAAEESPPRVA.QGQAVEATMVHASAPAPQPHRGPGPSDGG.GG.LGGHRDLVAGVGDA.T.................----------AVAAGAVTVPESGSRQTASATQ-q.................................................
A9ZNC8_9VIRU/15-778             ....LASTLADPRGALLQTA...........-EEYRRYRAGVFIGTMEHGQRGSYGRSIFYEVGFRHA........GARDALAPRSEHAIPIDCSLDINAVEAANFEGYARRFSN.......FSPQWQKMDLAGMVERLAKGVAAASLYGN...-.MGTVNLIAGQPTRVTALGTLDSPQTASIDSV..FIPRTVDTVGNDHVFAVLAAAANGEGAAVTTDVLRLDANTNQPIIPSVVGPAFATACVEALRILGANFESSGGGDVFAYALTRGIHSCVSVVAHTDEGGFMRNLFRHAAFRTPYGGVNQSLR...AFPSLPALAGTANTAVAAWVDAIALKTAAAVAHCDPLVPGPGGLFPTVFTSADGPISPAGTPE.GEPTDADARAIGRQISADLGRFAPLYMRALGQIVGTRTVS.GVAESHFCTVASLALDQGGGmVDRHLRHKTVAPYFWIEPTSLIP.RDFLDSPAEHAGYASKVTP.GHVAHEPCFEKFALLERGTTAnHATVAFKMRSARTSALICAYAGDP-AVLADIKLYQFDEDSVVLAGDQ..........GPTAG.PVPVKHAAADPISSYLWRRGQSCFPAPAEFINTNSNYGAKVSLITWD.NDFNATV.PDLPHEHEMAHESISFRVTRPTGLP.TGPSNYEDREARRARSRAAIALAQATVRARAFGGAASPTMAVSNVPPSFGE.--..SDTTYRDTDYSEY.RAD.PGTTTGRGIGGNVGGAGTS.RGAPLPPTAHHEPQRAPRLPPQGPLGGGPgGG.AAPPPQGGAGVPPP.Aaap..........ptgpNPPAGVLDERQLDPLPAPHIPG-----------afdregnnneq.......................................
A9UIB3_9VIRU/1-397              ....----------------...........-------------------------------------........---------------------------------------.......-----------------------------...-.-------------------------------..-------------------------------------------------------------------------------------------------GGFMRNLLRHDRFRVPYGGINQALR...HYPALPALASTSASSVAAWVDAIALKTAAAVGHCDPLVPGPGGWFPSVFTSREGGLEEPGSVG.EEPTDADARAIGRQIAADLGRFAPLYMKALTRIFGLHTYS.GVAESHFCTAGAGALEQAGDnVDRHLRYKTVAPYFWIEPTSLLE.RNAFGTLAESEGYGAKVTP.GDEEAYPCFERFKTMAMGSSAtHATVAFKMRTARTSALVCAYAAAP-APLANVKLYQFDESAVALPGDQ..........GPTAG.TVAAKHAAADPVSSYLWARGQSCFPAPAEFINTQSSYGAKIRMVSWDnDDFDAEM.TDIPPADELEHDVIKFRVSVPAGLE.SGVSNYANRQARRARTRAANALAQAVVRSRAFGLAVSPVMEVSDVPPVFDE.--..-------------.---.-------------------.-----------------------------.--.--------------.-.................---------------------------------pt................................................
G3C8V3_9VIRU/10-741             ....LSGVIANGRGALLTAD...........-NQFRRYAANTRSSATIGGNEDARLARIFYEVGRVHS........TKARALAAAPDGLLRVDAAYPTTGTLAEEFIGLAKKYTN.......FSATFEYSSLAGIVERIAKGLASQSVFGN...-.VDTGDLAAGRPIIVNALGTFDGPVNSLTNTV..FIPRLVNSSVTGDVFSVLVHAAAGEGAAIATDLLELDAATRQPILTVVDADGLARACVEALRLLGTNMMASNQGPLFALALCRGLHQVVTVVGHTDEGGIVRDLLRHSAFGVPFGGIHFSLE...PYAGLPALATNSVPDVCSYVDALALSSAALVAHADPGQLYDGRWYPTFYSGTSSDDVEVRPGGnLPGTDDMARRNRSQLIGGLSRFSEVYVRGLAQLFACPGDS.-RVASTFFNS---SVANIG-.VSRHLRYASVAPYFWIEPTSLIP.HDFLGTDAEAFGSGALATK.DVPRTKGFFEDCWASGVGDAA.FSGYHVMLRNPRSAWFFAHWLNHPRNGLGGTQVRQLDPNAIIHPG-G..........HATLP.DIRDRVEMALPWTDYLWTRGQSPFNAPGEFLNLAGTAGFMVNHYTFD.EDGIPQL.EHLPTAREFASGEVTISVGRPQGLA.NGPSNWGDSNARRARTRATRELAASAARVRAFGRPDVAEMPILTTAPQPRG.SR..VRPEPARANDQAG.VGGwRRASNSAGSGEAVP---EP.FGVPRDVVPQHQAVRYPVLARNLGAGGGV.AH.IPPPNRGPEGGENV.D.................-P-------------------------------vaiagaappggpnp....................................
Q1M2S1_9VIRU/18-766             ....LTGAVADPVGGLLQRG...........-KDFRRYRSGLSSEIPGPGRTFVEYRSIFYEVGRHYG........NISDALATPTPAAVRIDCSHTINETQAANFEGLARQYSN.......FASQWEKMDLCGIAERLARAIATQSVFGG...-.VTTTHMRAGQPLRVVALGTLDSPQTASTSSV..FIPRTVDSVGSDHVFAVLCAAANGEGASVSTDVLRLDVSNNAPLVPAVAGAPLATACVEALRVLGANMEESGAGDLFAYAVTRGIHRVVTVVSHTDEGGILRDLLRHDAFRVPYGGINASLR...HYPALPSAAGSHESSIAAWVDGIALKTAAVAAHCDPLVPGVGGMYPTVLVASKGSISPPGTPE.GDVSPDDARSLGRQLSADIGRFAPNYIRGLSALFGLQGYT.AIAERHLCATAGHYLEENSA.TNRHLLHKTIAPYFWVEPTSLIP.RDFLGTSAESENYAAKVSP.GCVAHEPLFEKFAPLAQGTTMtCATAGFKMRTARTSGYVCSQAAAP-ASLAMIQLKQFDTQSVVLAGDQ..........GPISG.DVVTKHRASSPLSSYLWVRGQSALPAPAEFINTQGCYGAKIKLVDWT.DDWDPES.TDVPRPDQFATGVVAWRVSLPTGLP.TGPSNAADRQARRARSRGAIALAQALNRARAFGEGASPTMEVSDVPPDLGL.AD..L-GHYDHTGFREH.RSD.PGKAQETGDGNPSPTPTLL.RGAAMPPTEQHKPQGGPRLPAP-PPTMGR.AA.GPVGPPSTPAPPPP.A.................-PVIAPPTVSDPPPMPEAA--------------tgaepvpqa.........................................
E7BMY2_9VIRU/1-168              ...m----------------...........-------------------------------------........---------------------------------------.......-----------------------------...-.-------------------------------..--------------------------------------------------------------------------------------------------------------------------...---------------------------------------------------------------.----------------------------------------.--------------------.-----------------------.-------------------.---------------------.---------------------NHPMNGLGAMKVRQLDPNGIIHPG-P..........CEAHP.QVRDRVEADLPFTDYLWVRGQSPFPAPGELINLGLSVGFLVRHMTLD.DEGIPNE.EHVPTSREFQDCVVTIDVGRPIGLQ.SGKTNASDSQAKRARTRANNELAAARTRARQYGVPDVGEMPTLTTAPGYAT.--..-------------.---.-------------------.-----------------------------.--.--------------.-.................---------------------------------rwsneqg...........................................
Q60GI3_9VIRU/9-746              flss----VLGDQRGGVLNS...........DSVFRRYRAAITTSTIVRGVQDTRVGFLVFAVGRVFS........SFSAALVRPKSSVPAIDATYPCPATRSEEFVGLAKKYSN.......FSSTFTHANFAGVVERLSRALAVLSTLPDsdtAaLTSLDIAGGVMPTVYSIATFDSPVNALARVV..FIPRIVDSLLSPNSLAVLIAAVAGEGSSVATDILRLDVSTRKAIVPIVSGPGLATAIVDALRVLASNMVEAGQGQLFSFAVTRGLHQALNVSSGTDGQYVMQSILRSGRFSPPLGGIHTSLP...VFSGLPALVSESRRDVATFVDALALVSAAGAAPADPCIVERGNTFPTVLVSPGQISDLDSSSS.MPGAFPSTPQLLGQLKEALPAFFSNYLRILSTVFAAGESD.-SVALDCACAFASLLEDLPT.---PLSAPTVLPFFWVEPTSLLP.ASVFSTTAESAGFGALATP.GSPVTRPAWGAIEHLVSPSSA.VSTATVSWTSARQNPFLWHFKGMRSDPLAAVIVDQFDPTDLAFAG-P..........GGAET.TLQ-KWGRQAPLTDYLWRDSASCLPAPGELLNLSGAIGLRFRHFVID.DNDDCAF.TRIPMFHEIGTGSVTIAVSRPCGLA.PDGPPARLERAT-VVSPALGYLRQRGANLRAFGRPDDLLAPRRLGPASLTV.AP..KAPPA-----PVS.APV.SSFAFSGPKTSSRDPLSGE.LPTPLVPVQHYKAETGPKTGGLGAAGGGG.GT.VKPPTAVPPGLTEV.P.................TAPDAGPTPEPHGA-------------------apslhe............................................
Q99AT4_9VIRU/17-776             ....LTGTLADPVGGTIQAD...........--HYRRYRAGVFMSVPDMGHVSNVGRSIFYEVGRHHG........RARDLLAAPHAEAIPIDCSVDINAAEAANFEGMARRFSN.......FSPQWVKMDLAGMVERLAKGVTAAGVFGG...-.IDTGTLRGGQAIRVTALGTLDSPQTASINSV..FIPRTVDTVGNDHVFAVLVSAANGEGAAVTTDVVRLDANTNQPMIPAVAGASFATACVEALRILGANMEASGAGDVFAYAVTRGVHAGVSVVAHTDEGGWFRNVLRHDRFRVPYGGINQGLR...QYPALPALASTSPSSIAAWADAIALKTAAAVAHCDPLVPGEGGWYPSVFTAGQNGTSAPGSSEsAEVGDQEARSIGRQIASDIGRFAPAYCRALGTLFGLHTSS.GVAESHLSTVAMRALTQDVN.TDRHLRHETVAPYFWIEPTSLIA.VNAFGTPAEAEGYGSKVTP.GDTRSEPCFERFRLLQKGSTAnHMTVAFKMRTARTSALVSAYAAAP-APLADLKLYQFDESSVVLPGDQ..........LPTQG.DVAHKHAAADPLSSYLWKRGQSCFPAPAEFINTNSNYGAKVRLVTWD.DDFNASL.SDLPNDEEMATGVVTFRVTVPTGLA.SAGSNAENREAKRARTRGAIALAQAVLRARATGLAVSPSMEISDVPPTFDT.PPllPAPTYSDTQSASG.PRD.PGPVPVLAVGGGLDVGRVA.RGAPLPPTAHHMPQRAPRIAGAVVPPGGP.VA.GPPAATGGPAAPNV.P................pPPPAGPLDSQDPLPAPPAHLPAEATAAEAVPA-q.................................................
Q83070_9VIRU/1-41               ....MNTSVFNLTRGRRVVS..........gDTSERVYTAVLNYCSTVRQSYQAT-------------........---------------------------------------.......-----------------------------...-.-------------------------------..--------------------------------------------------------------------------------------------------------------------------...---------------------------------------------------------------.----------------------------------------.--------------------.-----------------------.-------------------.---------------------.-----------------------------------------------..........-----.-----------------------------------------------.-------.-------------------------.---------------------------------------------------.--..-------------.---.-------------------.-----------------------------.--.--------------.-.................---------------------------------..................................................
Q9YXE5_9VIRU/15-789             ....LVGTLADPQGGGLAAD...........-NQFRRYRAALRIRAPDRGNYLTSTRSIFYEVGRRYG........SGGDALAPPPEAAMRIDCSVPINPAEAANFEGLARRFSN.......FSPQWEMMDLAAIAERLAKGVAAASVYGQ...G.LDTQALRAGQPIRVVALGTLDSPQTASTASV..FIPRTVDAVSNDHVFAVLCAAANGAGAAVTTDVLRLDANTNQPIVPAVTGAAFTTACVEALRMVGANMEASGAGDVFAYAVTRAIHSIVSVVAHTDEGGIMRGLLRHDAFRVPYGGINQALR...QYPGLPPLASVAQSAVSAWVDAIALKTAAVVAHCDPLVPGAGGLFPTVFVSRGDVPAAPGTAE.GDITDAQALSVARQMAADLGRFAPMYMRALTMIFGLRSNS.AIAEQHFCTAGARYLDQDGHrIDRHLRHGTVAPYFWVEPTSLIP.HDFLGTAAEAADYAAKCSPmGGVRSQPLFEEHRILGHGATAnHMSLAFKMRSARTSAFVAAYAASP-SVLGNFRLYQFDSASVVLPGDQ..........GPTNG.TVADKHAAADPLSSYLWVRGQSAIPAPAEFMNTQSAYGAKVRLIKWD.DDWDATR.TDAPDEMDF-QGSIDWAVTVPTGLA.IGASNAPDRAAKRARTRAATALAQVLQQMRGAGPASSPVMEISDVPPDFGG.--..AREEYRNTNNNVF.AGN.PGAGVIGGEAGAVAPQVPAhRGPPLGPTTHHQALRAPQLPRPGQAGAGG.GG.AAPPPLPPLVATPF.PffrrppeetmtalaarpLPFRLPLTRSPSPTTPLPLKAPTVKYRRRPRNE..................................................
Q6Q425_9VIRU/10-765             ....LSGVIAAPKGGRLAED...........-SAFRRYRAHVRTTATIGGNTDARNAFIRYEVGRSSG........KRGQLLAAPPDDSRRIEASYPTNAVLAEDFLGLAKKYSN.......FSAQFQFSSLAAVAERLAKGLAVHATVAD...-.VDSVALRGGAPLIVAGLGTYDGPINSLISSV..FIPRLVNNVLTGDVFSVLANAIAGEGASIATDIAEIDPSTRQPVIPEVDGDGFAKAATEALRIVGANMAQSDQGLLFSLAVTRGIHSVVSWLPTAMKAALL-GICCVWTFQCPFVGFITGSK...LHGPPSLLSTVSRSVLLCRCH--CTDPAAAVAPSDPGENYNGEWFPTFYSGTKGGDPTVRPGGdCPGNSETSGRIRSQLLADCEKFFRNYIPALGRIFGLTGSP.-NLAVTVAVGMSRFLHADP-.--RHLRYASVAPWYWIEPTSLLP.SDFLGSVAEMNGSGSFGGK.DSTKTKLAWEDIELAGDRDTT.FSAYRAKFLSPRRAWFMAHWNGHPDNGLGCIRLRQADPNGFIHPG-R..........GTSGA.DLRDRLEDDAPISDYLWDRGQSPFCAPGELLNLGSTIGFLVRHVTFD.DDGIPTT.EHVPTSREFLDTTVTIEVGRPLSIS.IGKSNCPDSKARRARTRATIELGAASRRARAFGSAAVAEMPTLSTAPRALTfAP..SRLMVKDTGGGAG.--S.SRHGADSGGSGADDAARKA.DGVPVRATAHNQPVRFPTLANPTGPTRSS.AA.PAAAARDQSAGGPS.Vdivr.........sggdAASEVGSDVAPAP--------------------apgvesgvvsssvaaptne...............................
Q6GYC1_9VIRU/17-776             ....LTGTLADPVGGTIQAD...........--QYRRYRAGVFMSVPDMGHVSNVGRSIFYEVGRHHG........RARDLLAAPHAEAIPIDCSVDINAAEAANFEGMARRFSN.......FSPQWVKMDLAGMVERLAKGVTAAGVFGG...-.IDTGTLRGGQAIRVTALGTLDSPQTASINSV..FIPRTVDTVGNDHVFAVLVSAANGEGAAVTTDVVRLDANTNQPMIPAVAGASFATACVEALRILGANMEASGAGDIFAYAVTRGVHAGVSVVAHTDEGGWFRNVLRFDRFRVPYGGINQGLR...QYPALPALASTSPSSIAAWVDAIALKTAAAVAHCDPLVPGEGGWYPSVFTAGQNGTSAPGSSEgAGVGDLEARSIGRQIASDIGRFAPTYCRALGTLFGLHTSS.GIAESHLSTVAMRALTQDVS.TDRHLRHETVAPYFWIEPTSLIA.VNAFGTPAEAEGYGSKVTP.GDTRSEPCFERFRLLQKGTTAnHMTVAFKMRTARTSALVSAYAAAP-APLADLKLYQFDESSIVLPGDQ..........LPTQG.DVASKHAAADPLSSYLWKRGQSCFPAPAEFINTNSNYGAKVRLVTWD.DDFNASL.SDLPNDEEMATGVVTFRVTVPTGLA.SAGSNAENREAKRARTRGAIALAQAVLRARATGLAVSPSMEVSDVPPTFDT.PPllPAPIYGDTQSASG.PRD.PGPVPVLAVGGGLDVGRIA.RGAPLPPTAHHMPQRAPRIAGAVVPPGGP.TA.GPPAAAGGPVAPNVlP.................PPPAGPADSQDPLPAPPAHLPTDATAAEAVPA-q.................................................
CAPSD_HV19S/10-772              ....LAGVIARPQGGNITSD...........-ETFRRYRTIVRTSATIGGNEDSRTTSIFHEIGRAVN........TKGKALAVAGMEAPLVEASYPTNAVLVEDFIGLAKKYTN.......FSATFEYSSLAGVVERLARGLAACSVFED...-.VTSTDLRGNNPLAVHALATYDGPVNSLTSAV..FIPRLVNNALTGDVFAVLCNCVAGEGGTVVTDTIELDANTRQPIVPEVGPLGVPGAIVDALRLLGSNMIASDQGPLFALALTRGIHRVLSVVGHTDEGGIVRDLLRCGGFGLPFGGIHYGLE...EYSGLPALQFNSAAATAAYVDGIALVTAAVVAHADPGERYNGEWFPTFFDGTTHADTMRRSGDsTEGTAAMADRNRAQLLARQQLFWRPYITALGACFSTAGDI.-SVAERFQCAASHSLGADP-.--RHLRLPSVAPYFWIEPTGLIP.HDFLGSVAEEEGFASYCWR.DTTRTRPAWDSIVLSGARDTT.FSAYHIRMKGARTAWFLAHWLGHPENGLGATRVRQLDPNAVLHPG-P..........CEGNE.QVRDRVEADLPLTDYLWRRGQSPFPAAGELLNLTSEWGILFRHVTFT.DDGDLNP.EHLPAAHEMADTTVTMTVGRPIGIA.PGRSNAGDNQARRARTRASVELSAASRRARVFGRPDVGEMPTLTSAPAPIP.AS..PAYDGNRGGEAGG.VTG.RGNNRSAAPGHASWSERQA.DGVPVNVTPHHNALRAPPFPRQQGALGGG.GN.VPLPPAPGAAPPPP.Pgppng.......ppagpPPSDDGSSNPAAPVPTAIHAPPAAAQADRAEGQ..................................................
Q76L28_9VIRU/13-702             ....LAGVIANPRGGQMGQQ...........---YRSTVSTITTMAKVNSNADSRSSVVKYEIGRRHD........ARRNAFAPYADEAIRVDVSYDTPAIMSETFAGLAKKYSN.......FSASFERSSLAGIVERLAK-VSRCKLLPR...C.-YIGGFDRRARDPVTGLATHFTPVSSLDASV..FIPRRIDTMTCPGVFAVLCAAVAGEGSQIVTDLIEINVGNNHPIVTTVDVAGLPAACVGALRVLGANMIAAGQGDLFGYAVARGIHQVVSVVGHTDEGGVMRDLLRVDGFGAPFGGIHFGLP...VYTGLPHIDVGNDLQLSGWVDGIALSTAALVAHCDHGVVYNGTWFPTTLSGSAAAPVEPGLDA.PAGDEGYVARNRNQLADELSPFSLNYANGLAKLFGAGTAG.GLTVLHLSGR-AGSLADDC-.--RHLNFATANPFFWIESTSILP.ANFLGTQAETEGRASYGGR.CSNSSLPLWNQATCVSAVDSA.VCEYTVEMASPRRVPFMLHWNGNPRNGLGNILPRQMDPMAIIQPG--..........GAEAR.SIRERMIANNDLASYLWTRGQSPIAAPGEFMNTSINVGILVKHCE--.TTWDGAVlSHLPSPSEFTTGALWLQVGRPTGVA.VGPLGKTNANERRARTAATNALLRARHLSRGHNLVAVNMLPLSFSAPSFGA.PR..VIETHDNINRAPP.GG-.-------------------.-----------------------------.--.--------------.-.................---------------------------------gsadtgvgvdrvvnaadaqgplrptgrttsngcpsrqgdqtw........
E7BBP6_9VIRU/10-757             ....LSGVIASPRGGSLDND...........-NRFRRYRTSVRTTATIGGNDDSRTTSIFYEVGRAVN........TKGRALNRPSDGALCIEAAYPTNTVLAEDFIGLAKKYTN.......FSASFEYSSLAGVAERLARALAASSVFTD...-.VDSNDIRGGAGLVVNAVGTYDGPISSLTNTV..YIPRLVNSSITGEVFSVLANAVSGEGSSVATDIIELDAGTRQPLIPEVDPAGLAAACVDALRIVGSNMIASDQGPLFSLAVTRGIHRVLSVVGHTDEGGITRDLLRCSSFAPPFGGIHYALE...PYAGLPALQFTAFPAYAAYVDSIALTTAAVVAHADPGVMYGGSWFPTFYNGTADSDGTVRPGQnQAGTAAMANRNRAQLLGSAPAFFSEYIRGLATIFGASGDS.-SLACRFMGAASYALPQDP-.--RHLRYATVSPWFWIEPTGLLP.HDFLGSKAEANGAGSFAWK.DTTRTRVAWDELTQHGEADTT.FSAYVARFRSPRQQWFFAHWMNHPLNGLGAIRVRQLDPNGIVQPG-Q..........CVAHP.DVRDRVEADLPFTDYLWTRGQSPPPAPGELLNLSGSVGFLVRHLTYD.DDGVPHE.EHVPTRREFLDTTVTIEVGRPVGIA.TGASNAGDNHVRRARTKAANELAAARRRAAVFGRADVAEMPILTSAPALAP.P-..PSAGLERGSDPGGsGSQ.RRAVPAGLPGNDTWA-REP.TGAPRNPVPHHQPLRAPQLARQAGGLGG-.GA.APIPPPPPGVPAPP.A.................LPPADDDNAPPAPVATAPPVA------------dpqamvgdq.........................................
A4FRF5_9VIRU/10-762             ....LSGVLANARGGRITTK...........-DTYRRYKTIVRTSATIAGVLDTRLTGIFYEIGRAVD........TKGKLLKSHKEDITLVEASYPTNSVLAEDFIGMAKKYTN.......FSASFEYSSLAGVVERLGKGLAACSLFDS...-.VTSTDLRGGAVLAVNALGTYDGPVNSLTDAV..YIPRLVNTTLTGDVFAVLCNAVAGEGSQVVSDVVELDANTRQPIIALVDSVGLPGAIVDALRVLGSNMIASDQGPLFSLALARGLHRGLSLVGHTDEGSITRDLLRCGGFAPPFGGIHYGLE...PYVGLPALQTNLDKGVSAYVDAIVIATGAAVAHADPGTRFDGHWFPTFISGTASGEPLLRPGEhTTGTTAMADRIRARLLADQSPFWEGYTRALSIIFGAEGDT.-SLSVRFACAASTALDVDN-.--RHLKHASVSPWFWVEPTSILP.PNLLGSEAELEGCASLAHK.DTVVSKPAWDTITRVGSSDVS.FSAYRARFKFARQTWFFNHWLNHPMNGLGAMKVRQLDPNGIIHPG-P..........CTAHP.QVRDRVEADLPFTDYLWIRGQSPFPAPGELINLGLGVGFLVRHMTLD.AEGIPNE.EHLPTSREIQDCVVTIDVGRPIGLA.SGKTNAADSQAKRARTRANNELAAARTRARVFGTPDVGEMPTLTTAPGYAT.R-..WSSEQGIDSTSGG.VVS.RGRHDHAAPGHASGGDREP.TGKQNIAVPQHQPLRYPALPRQGAGLGGG.ANpIPPPPAPPAGGPDD.G.................-PQSDDDNTPSAPTAP-----------------lglsttpprspaapgngp................................
Q83072_9VIRU/8-713              ....MNTSVFNLTRGRRVVS..........gDTSERVYTAVLNYCSTVRQSYQAT-TNVHWRLKQRGK........KASHVSRAHAGISASFD--------YADNLKQEILKYHSrhvcteiVVGRDYRFDFRSLLHHAGACMAHYCLTGV...LdLNVLSSGKSGGTRVTVLSNADGLSILATDVL..YLPNALK-MMDINIFNCIYLLAAACECNIVFDDVILTGGTSAYNVPALNSVTVEYAPTLHNYISVAFTSNGDGGCDGALALTAGLHTVVTVVAHSDEGGQMRDVLRALHYAPAKGIVVADPNrtvNHSLPLLMYEPTWDSVCGMWDYVAVATAGLVHLCDPCELIAHDVYPTIIT---APDENNVRAI.-----------EARVEAALPAFASIYIHNLAMFMGVGGDDcGRAVDTLVEAGVYIYSLTGNdASRHMLKGTMAPWFWVESTGLFRdLTCFNIPGLSAGYGPQAIY.GTAITQPAMQACEYTGTRGS-.YDYYNVGWTSLRKHPLLVLTNNRAGDGIAHMEVGRDAAIPWVLLGQPqrrectaqghGTQTA.TCGHTKHNRGTLDEYIWGRFSTGLFHPAELTTFTN---VEFRVKCWT.EDNDGNVlETGAPVKDIVEGGVTVSVNAILLTN.STNHIRTVPAVRRSYQAGAKYLEE----ARSRGTMSTLNRIIGGQ------.--..LFRDLQPISKRGV.PPQ.PEPVCASMPVETTKEVSLS.RIGPIRINQNVFRPRPQPTEEEMHEEPTP.VA.LE------------.-.................---------------------------------aeppgen...........................................
CAPSD_LRVLG/17-741              ....MFCEIIKLANRKRLIL..........dTTGERVYDARINYCSTADATVQAD-CHIYWRLKLR--........RTDAVFEEYTGQGYALD-----TASYPQQYADIIRGYYSkhvssalAANTQHFVNVLAMLRHAGACIAHYCMTGK...IdFDILSKKKHKNKEVVTLSSADSLSFLPHSAL..YLPSALR-ASDPEIFNVLYLLGCACDASIAMDNIANTSGAAKYAMPHYNPLQLSHALHVTIFYMLGLMDSCGYGEDAVLALTAGLHSVTTVIAHSDEGAITRDALRELSYTQPYGTMPVPIAgyfQHINVLFTTQPAWDQFAGIWDYVILATAALVHLSDPGMTVNDVTYPTTLTTKVASVDGRNSDI.-----------AAQMMHSATRFCDIYIENLCLFWGVVANPdGNASQALLHA--FNVVACGTePNRHLEMNVMAPWYWVESSALFSdYSQFRSPISSAGYGPQSIY.GARLVLAATNSLEFTGEAGD-.YSAYRFEWTTMRHNPLFNILNKRVGDGLANVDFRLRPFNEWLLEGQPsrrscdavghGTPTA.TCNHKTPNRNTVDEFIWGSTSCDLFHPAELTSYTA---VCVRFRNYL.SEADGDVrVLNTPTREVIEGNVVTRCDGIRCLD.SNKRIQHVPEVARRYCMMARYL-Q----ARTFGALTIGDDIIRGFDKVDKV.VK..MHKSNNRLGQMPL.IDV.TGLCQPMIETSTARASMTT.RIDPNRLAAATARIELPLAPRCTSSLIPS.SD.AVPEPEPHVGEPGN.G.................---------------------------------sgca..............................................
Q83098_9VIRU/1-41               ....MNTSVFNLTRGRRVVS..........gDTSERVYTAVLNYCSTVRQSYQAT-------------........---------------------------------------.......-----------------------------...-.-------------------------------..--------------------------------------------------------------------------------------------------------------------------...---------------------------------------------------------------.----------------------------------------.--------------------.-----------------------.-------------------.---------------------.-----------------------------------------------..........-----.-----------------------------------------------.-------.-------------------------.---------------------------------------------------.--..-------------.---.-------------------.-----------------------------.--.--------------.-.................---------------------------------..................................................
E7BMY1_9VIRU/1-258              ....----------------...........-------------------------------------........---------------------------------------.......-----------------------------...-.-------------------------------..--------------------------------------------------------------------------------------------------------------------------...---------------------------------------------------------------.----------------------------------------.--------------------.-----------------------.-------------------.-----MPAFSGVSVHGVGDFV.KSFYRADIPSARRCGALLHFWGHPLDGVATIIPRQFDVENVIQPGAG..........SAGTPdRLYDRLVASRSLADYLWTRGQSPFPAPGEMMNLSVSLGFMVQHTVVG.DEFDFVD.THMYQNTELLAARVTLHVGRPRGLA.TGPAHQGTRDVRRARTAATAALQSVKRRVQIFGTNDPGEMPIMASAPPREP.QV..LQNGELD------.---.-------------------.-----------------------------.--.--------------.-.................---------------------------------sgaglggraraydrrlvangpsgpphlpqghegthtvprlpaqgrpgggg
Q8AZ67_9VIRU/15-773             ....LTGTVAGISAGTIGQD...........-NQYRRYRAGLTIGVHEHGSYTQARRSIFYEVGRRYG........RLTDALGPHGAEAVPIDASVRINAAEAANFEGFARKFSN.......FSPQWLTMDLCGIAERLAKGVAAQSVYGG...-.VNIVNLRGHLPVRVVALGTLDSPQTASNNSV..FIPRTVDTVGNDHVFAVLAAAANGEGAAVSTDVLRLDANTNEPVIPAVSGPSLASACIEALRIVGANMEASGAGDLFAYAVTRGIHAVVSVVAHTDEGGYMRALLRHGRFRVPYGGINQALR...DYPALPAAGALATHVISSWVDAIALKTAAVVAHSDPCVIASGGLYPTVFTSSQGDITPPGTDEgDSPTDADARAIGRQIAGDLGRFAPTFMAGLLRIFGLQTSS.QVAEAHFCTVGGMYLSENV-.-DRHLRHKTVAPYFWVEPTSLIE.VGFLGSTAETAGFGSLVTP.GDQAMIPTFERVREMDRGRNAnFSTIAFKMRTARTSGLVCAHAAAP-TPLAGLKLYQFDQDSLILAGDQ..........GPTNG.DVPTKHVAADPLSSYLWVRGQSAIPAPAEMINTQASYAAKYKNITWD.DDFEGTV.SDLPKAWEL-EHDTMWRVTVPTAFSvTGPSNYLDREARRARSRAAISLAQAALRARAYGEANSPVIDVSNVPPTWDD.--..ERAPVVVFSDEIH.TSD.PGTAQGRGIGNPPDVTAPV.TGAPLVPIPHHQPLRGPPFPRGAGVM-GG.GV.APPPPAGPGGPPAG.Pgpnp.........ppppPPGGDGGDDAAAA--------------------aavaggdvhgaagalpap................................
Q83100_9VIRU/17-741             ....MFCEIIKLANRKRLIF..........nTTDERVYDARLNYCSTADSTVQAD-CHIYWRLKLR--........RTDAVFEEYTGQGYSLD-----TAAYPQQYTDIIRGYYSkhvssslAANTQHCVNVVAMLRHAGACIAHYCMTGK...IdCDIVSKKKHKNKEVVTLSNADSVSFVAHSAL..YLPSPLR-ASDPEIFNMLYLLGCACDASIAMDNISNTSGAAKYSMPHYNPLQLSHALHVTIFYMLSLMDSCGYGDDAVLALTSGLHSVTTVIAHSDEGGITRDALRELSYTQPYGTMPVPIAgyfQHINVLFTTQPAWDQFAGIWDYVILATAALVHLSDPGMTVNDVTYPTTLTTKVATVDGRNSDL.-----------AAQMMHSATRFCDIFVENLSTFWGVVANPdGNASQALLHA--FNIVACAVePNRHLEMNVMAPWYWVESSALFCdYAPFRSPISSAGYGPQCVY.GARLVLAATNSLEFTGEPGD-.YSAYRFEWTTMRHNPLFNILNKRVGDGLANVDFRLRPFNEWLLEGQPsrrscnsaghGTPTA.TCSHKTPNHDTLDEYIWGSTSCDLFHPAELTSYTT---VCVRFRNYL.SGADGDVrILNTPTREVIEGNVVTRCDGIRCLD.SNKRIQHVPEVARRYCMMARYLAQ----ARTFGALTIGDDIIRGFDKVEKI.VK..MHKSNNRLDQMPL.IDV.TGLCQPMIETSTVRASTPT.RIDPNKLAAATARVELPLAPRCTSSLIPS.SD.TVPEPEP-------.-.................---------------------------------qvgetgdnggc.......................................
Q9YXE7_9VIRU/67-833             ....LAAVIASPRGGTLLTAptkkgkekkapLATYRRYRANIRTESTIAGNVDARVAGIQYEIGARYE........RVGEAFAPVPEEQVLFEAAYPSSAALAEDFVGFARKYSN.......FSATFAHSSLAGLVERVARTLGALTVFPS...GtFDQDAIRGGRPLMIAALGTLDGPVNSLAGSV..FIPRLVDSVISPDVFTILINAAAGEGSRVITDVLELDATTRRPIVPTLRDSSMLLPCVEALRILGANMAACDQGPLFAFALVRGLNAVLSLVGHTDEAGVTRDIFRVSGFDIPFGGIHFGLE...PYAGLPAVASNAGADACCYVDALLMTSGALVAHCDPGQEYGGRWFPTVLQGTGPDTAEVRPGQsQEGTADMANRNRGLLASSMPRFAEHYARGLGRLFAIEGDA.-RIVVNILSASARLLPDNC-.--RHLRYPSVSPYFWVEPTSLLP.PDFLGTAAELNGCGSLAMR.GTSRTRQAWEDIERVGDEDVT.FTGYNVAMPFARSSWFLIHWLNHPANGLGALRVRQLDPNGVIHPG-P..........CADNP.DVRDRVEASLPITDYLWVRGQSPFPAPGEFLNLTGTLGLLARHLTMD.DDGIPTE.EHLPTGREFRDTAVTVVAGRPVGLP.NGAHNAYDSQARRARTRATRELAASAARARLYGRATVAEMPILTSAPVLRA.AP..PRPEAVNPMEGGG.PGH.DLARHSGMGRHTYPPDREQ.RGDPAVPVPQHQALRAPQMPRPGPNPQGG.GV.IPPPPPLPPSGGGD.G.................SGPSSGGSCAQEDTNPAPPVAPGPAQPDGPANE..................................................
#=GC seq_cons                   ....LsuslssspuGphhss............spaR+YcAslphsushtGshpsp.ptIhaElGtths........pttphht...ttuh.l-suhshsss.utpF.GhA++aoN.......Fuspa.h.slsuhsERlu+slAshslhss.....hs.sshttstshhVsuLuThDuP.su.tsuV..aIPRhlssshssclFsVLhtAssGpGuslsoDhlcLDsssppPhlPtlsssshstAhstALRllGuNM.sustGslFuhAlsRGlHpsloVVuHoDEGGhhRslLRpstFtsPaGGlp.uLp....asuLPshsssu.sshuuaVDulALtTAAhVAHsDPhh.hsGshaPThhsustssss.stsst...ss...stt.ttQlhushstFs..YhcuLutlFGhtsss...sttphhsshshhLstss....RHLchtoluPaFWlEPToLls.hshhGosAEttGhuuhsh..ssstshPsa-phphhupssss.aushthchposRpsshhstatspP.suLuslclcQhDssullhsG............sssps.sltc+htAssPlosYLWsRGQSshPAPuEhlNhsushGhhlRhhsas.--hsss..pclPsscEhhpssVohcVstPtGLs.sGssNttsppA+RARo+AsttLupuhhRARsaGtsssspM.l.sssPshts......t.thtphsttsh..st..t.s.shh.sts..s.t.s.pssPh.ss.ppts.chP.hst.hss..us.us.hss.s.s..s.sss.s..................................................t.................................................
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