GenomeNet

Database: Pfam
Entry: Trypan_PARP
LinkDB: Trypan_PARP
Original site: Trypan_PARP 
#=GF ID   Trypan_PARP
#=GF AC   PF05887.8
#=GF DE   Procyclic acidic repetitive protein (PARP)
#=GF PI   Trypano_PARP; 
#=GF AU   Moxon SJ
#=GF SE   Pfam-B_9554 (release 8.0)
#=GF GA   40.00 40.00;
#=GF TC   40.20 40.30;
#=GF NC   39.90 39.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   2342468
#=GF RT   Transcription of the procyclic acidic repetitive protein genes
#=GF RT   of Trypanosoma brucei. 
#=GF RA   Clayton CE, Fueri JP, Itzhaki JE, Bellofatto V, Sherman DR,
#=GF RA   Wisdom GS, Vijayasarathy S, Mowatt MR; 
#=GF RL   Mol Cell Biol 1990;10:3036-3047.
#=GF DR   INTERPRO; IPR008882;
#=GF CC   This family consists of several Trypanosoma brucei procyclic
#=GF CC   acidic repetitive protein (PARP) like sequences. The procyclic
#=GF CC   acidic repetitive protein (parp) genes of Trypanosoma brucei
#=GF CC   encode a small family of abundant surface proteins whose
#=GF CC   expression is restricted to the procyclic form of the parasite.
#=GF CC   They are found at two unlinked loci, parpA and parpB;
#=GF CC   transcription of both loci is developmentally regulated [1].  
#=GF SQ   21
#=GS D3SGT3_THISK/18-125     AC D3SGT3.1
#=GS B8GPQ1_THISH/57-202     AC B8GPQ1.1
#=GS W7JNA2_PLAFO/81-183     AC W7JNA2.1
#=GS M5A3Q6_9ACTN/14-112     AC M5A3Q6.1
#=GS Q389V1_TRYB2/1-141      AC Q389V1.1
#=GS Q581F3_TRYB2/1-127      AC Q581F3.1
#=GS S1NDH9_9ENTE/3654-3756  AC S1NDH9.1
#=GS C7NK75_KYTSD/80-204     AC C7NK75.1
#=GS A6W0U4_MARMS/92-172     AC A6W0U4.1
#=GS Q581G0_TRYB2/1-129      AC Q581G0.1
#=GS C5YCQ9_SORBI/4-123      AC C5YCQ9.1
#=GS F9WBZ0_TRYCI/1-149      AC F9WBZ0.1
#=GS Q389V2_TRYB2/1-129      AC Q389V2.1
#=GS Q581F6_TRYB2/1-123      AC Q581F6.1
#=GS Q21LI5_SACD2/135-214    AC Q21LI5.1
#=GS Q581F9_TRYB2/1-114      AC Q581F9.1
#=GS A0RXY2_CENSY/77-190     AC A0RXY2.1
#=GS E1SSB7_FERBD/1549-1644  AC E1SSB7.1
#=GS F7XNB6_METZD/612-690    AC F7XNB6.1
#=GS Q8IM51_PLAF7/81-183     AC Q8IM51.1
#=GS Q21GJ5_SACD2/1103-1197  AC Q21GJ5.1
D3SGT3_THISK/18-125                aigaavlggltlamaptvavadegahrvvitssg----------------------------.-------------------------...DHV.G.....SVTVPPP.EP.EPEPEPEP..EPEPEPEPEPE..PEPEPEPEPEPEPEP.EPEPEP...EPEPEPEPEPEP-------------------------inagggmqv........
B8GPQ1_THISH/57-202                .........................plavalhas--------LALLLTVTLAMPGHGQAQTAtDEQSLETSTSPGRGNGNGRVKDSDDggkTNN.GrgnnkVSNDPEP.EP.EPEPQPEP..EPEPQPEPEPE..PQPEPEPEPQPEPEP.EPQPEP...EPEPQPEPEPEPQP-----------------------epepvvelntwyvvvq.
W7JNA2_PLAFO/81-183                ...........................smkyrha----------------------------.--------SKGSKGYSKKMTKTSSR...SRQ.C.....NDLP-LE.KS.EQETEPEL..EPEVEPEVEPE..VEPEVEPEVEPEVEP.EVEPEV...EPEVDPEVDPENDQGT---------------------gsqnnitecys......
M5A3Q6_9ACTN/14-112                .......................agallvsacgg----------------------------.----------------------GSD...DAS.N.....DELAPEV.EP.APEAEPEP..VPETAAEPEPE..PE--------LEPEP.EPELEP...EPEPELEPEPEPEAAGEVIEATL--------------teweiaapteyaagtit
Q389V1_TRYB2/1-141                 ..................................MAPRSLYLLAILLFSANLFAGVGFAAAA.EGPEDKGLTKGGKGKGEKGTKVGAD...DTN.G.....TDPDPEP.EP.EPEPEPEP..EPEPEPEPEPE..PEPEPEPEP--EPEP.EPEPEP...EPEPEPEPEPEPEPGAATLKSVALPFAVAAAALVAAF.................
Q581F3_TRYB2/1-127                 ..................................MAPRSLYLLAILLFSANLFSGVGFAAAA.EGPEDKGLTKGGKGG--KGTKVSDD...DTN.G.....TDPDPDP.EP.EPEPEPEP..EPEPEPEP---..-----------EPEP.EPEPEP...EPEPEPEPEPEPEPGAATLKSVALPFAIAAVGLVAAF.................
S1NDH9_9ENTE/3654-3756             ..tiagytflkvdesseakstgvvekgtheiklv----------------------------.-------------------------...---.-.....YTKDSEP.TP.DPEPNPEP..NPEPEPEPEPT..PDPEPEPTPDPEPNP.EPNPEP...NPEPEPTPEPEP-------------------------vikngyvevv.......
C7NK75_KYTSD/80-204                efapradlatkaeqiaaaqrllaiqgpgawplcs----------------------------.-------------------VKAGLT...SANgG.....ADRNAMP.GDsAPAPKPEP..KPEPKPEPKPE..PKPEPKPEPKPEPKP.EPKPEP...KPEPAPKAEPAPEATTWT-------------------iergvnlrpaag.....
A6W0U4_MARMS/92-172                .................saqvdglsldsegvsii----------------------------.-------------------------...---.-.....-------.--.----QPEP..EPEPEPEPEPE..PEPEPEPEPE--PEP.EPEPEP...EPEPEPEPEPEPEPVKK--------------------isrtdplpwatgr....
Q581G0_TRYB2/1-129                 ..................................MAPRSLYLLAVLLFSANLFAGVGFAAAA.EGPEDKGLTKGGKGKGGKGTKVSDD...DTN.G.....TDPEPEP.EP.EPEPEPEP..EPEPEPE----..----------PEPEP.EPEPEP...EPEPEPEPEPEPEPGAATLKSVALPFAIAAVGLVAAF.................
C5YCQ9_SORBI/4-123                 ..............................hhaa---------TILLLIASLFVAVAISRAN.ARPTMRPSKMAALRHDAYGQGYVA-...--D.A.....TELKPEP.EP.KPTCDNCE..QPKPEPEPEPE..PEPEPEPEPEPEPKP.KPEPEP...KPEPEPEPKSE--------------------------ltcnkvhgvqt......
F9WBZ0_TRYCI/1-149                 ..................................MTPRHLCFLTVLLFGAALFSAEGSAAAA.PAPAVRRNVEVPLAKAEEPGENGTE..pGEN.G.....TEPGENG.TE.PGENGTEPgeNGT-EPGENGTepGENGTEPGENG-TEPgENGTEPgenGTEP-GENGTEPAAGASGFMSVVMPMAFVAVGMVATF.................
Q389V2_TRYB2/1-129                 ..................................MAPRSLYLLAILLFSANLFAGVGFAAAA.EGPEDKGLTKGGKGKGEKGTKVQ--...---.-.....----DEV.EP.EPEPEPEP..EP----EPEPE..PEPEPEPEPEPEPEP.EPEPEP...EPEPEPEPEPEPEPGAATLKSVALPFAIAAVGLVAAF.................
Q581F6_TRYB2/1-123                 ..................................MAPRSLYLLAILLFSANLFSGVGFAAAA.EGPEDKGLTKGGKGG--KGTKVSDD...DTN.G.....TDPDPEP.EP.EPEPEPEP..EPEP-------..-----------EPEP.EPEPEP...EPEPEPEPEPEPEPGAATLKSVALPFAIAAVGLVAAF.................
Q21LI5_SACD2/135-214               ......................lpdvylngvncs----------------------------.-------------------------...---.-.....----NPG.EP.EPEPEPEP..EPEPEPEPEPE..PEPEPEPEPEPEPEP.EPEPEP...EPEPEPEL-----------------------------aysldatasflnfvs..
Q581F9_TRYB2/1-114                 ..................................MAPRSLYLLAILLFSANVFAGVGFAAAA.DESASNVIVKGGKGK----------...---.-.....-EREDGP.EE.PEETGPEE..TGPEETGPEET..GPEETGPEETG---P.-EETEP...EPEP----------GAATLKSVALPIAVAAAALVAAF.................
A0RXY2_CENSY/77-190                .......................tivgidqivpg---------------------------S.DGSYEKTLVAGGPQW-KQGGDYEIK...VQY.G.....AQSHVGFfEY.LGGAAAQP..EPEPEPEPEPE..PEPEPEPEPEPEPEP.EPEPEP...EPEPEPEPEPEVQCGAGTI------------------lqdgs............
E1SSB7_FERBD/1549-1644             .hgetevtvtvqdkvhgsdiatttfmltvvsdgv----------------------------.-------------------------...---.-.....-------.--.----EPQP..EPVPEPEPEPE..PEPEPEPEPEPEPEP.EPEPEP...EPEPEPEPVSSGSLGS---------------------glllmlalaml......
F7XNB6_METZD/612-690               ...................dvrfypfvertvgep----------------------------.-------------------------...---.-.....-------.--.--------..-VAPEPEPEPE..PEPEPEPEPEPEPEP.EPEPEP...EPEPEPEPEPEPTPGFEAIFAIAGLLAVAY-------far..............
Q8IM51_PLAF7/81-183                ...........................smkyrha----------------------------.--------SKGSKGYSKKMTKTSSR...SRQ.C.....NDLP-LE.KS.EQETEPEL..EPEVEPEVEPE..VEPEVEPEVEPEVEP.EVEPEV...EPEVDPEVDPENDQGT---------------------gsqnnitecys......
Q21GJ5_SACD2/1103-1197             ................vfgasvnlnwlnigdals----------------------------.-------------------------...---.-.....--PELEP.EP.EPEPEPEP..EPEPEPEPEPE..PEPEPEPEP--EPEP.EPEPEP...EPEPEPEPEPEVDPTA---------------------plactatassqegala.
#=GC seq_cons                      .................................s.............................................................s.....sp.tsts.Es.cPEs-PEP..EPEPEPEPEPE..PEPEPEPEPpPEPEP.EPEPEP...EPEPEPEPEPEPpsus......................................
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