GenomeNet

Database: Pfam
Entry: UvsY
LinkDB: UvsY
Original site: UvsY 
#=GF ID   UvsY
#=GF AC   PF11056.7
#=GF DE   Recombination, repair and ssDNA binding protein UvsY
#=GF AU   Pollington J, Finn RD
#=GF SE   PRODOM
#=GF GA   22.80 22.80;
#=GF TC   24.80 35.70;
#=GF NC   22.40 22.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 26740544 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   2522995
#=GF RT   UvsY protein of bacteriophage T4 is an accessory protein for in
#=GF RT   vitro catalysis of strand exchange. 
#=GF RA   Harris LD, Griffith JD; 
#=GF RL   J Mol Biol. 1989;206:19-27.
#=GF DR   INTERPRO; IPR021289;
#=GF CC   UvsY protein enhances the rate of single-stranded-DNA-dependant
#=GF CC   ATP hydrolysis by UvsX protein. The enhancement of ATP
#=GF CC   hydrolysis by UvsY protein is shown to result from the ability
#=GF CC   of UvsY protein to increase the affinity of UvsX protein for
#=GF CC   single-stranded DNA [1].
#=GF SQ   4
#=GS G8GIU9_9CAUD/16-138  AC G8GIU9.1
#=GS E1XTE8_BPSAV/17-151  AC E1XTE8.1
#=GS UVSY_BPT4/9-137      AC P04537.3
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT I; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWS B; 9-136;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWS D; 9-136;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT F; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWR E; 9-136;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWS F; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT B; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWQ B; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWR F; 9-136;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWS C; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT C; 9-134;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT L; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT J; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWR B; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT G; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWQ F; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWR D; 9-134;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWQ D; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWS E; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWR C; 9-136;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT K; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWR A; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWQ E; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT H; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWQ G; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWQ A; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWS G; 9-137;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT M; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT A; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT E; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT N; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWS A; 9-136;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWQ C; 9-135;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWR G; 9-133;
#=GS UVSY_BPT4/9-137      DR PDB; 4ZWT D; 9-135;
#=GS Q6WHC3_BPKVM/9-136   AC Q6WHC3.1
G8GIU9_9CAUD/16-138             ...........e-YDMDSNWNPLTIKHHLTTLSGTIAKYLNYWSRLKHIIIQIDEEYNEKYMMLYSHYRENSN.-----IN.....YTVT-EIKDLISKDNELCNIRVKKSTAILIMEYIEKCVDNLNKTRYDLSNYIEIEKFLNGK.
E1XTE8_BPSAV/17-151             eldplisvnped----------MNLDQISLKIGRSWMAVQRHYIREGRYLEFLTGKFRQIDLYLRRYYAGELP.PNIYVERplkvrPLKS-DIDVWVKADDDYIELSSMLQEQKAKVKLIESSLERLNKLGYEVKNAIDWRKYLDG-m
UVSY_BPT4/9-137                 ............ELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARLDYYSGRGDgDEFSMDR.....YEKS-EMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRGFAIKHIQDMRAFEAGK.
#=GR UVSY_BPT4/9-137      SS    ............HHHHHHS--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSSSB--SS-.....--HH-HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTX.
Q6WHC3_BPKVM/9-136              ............EYHEDVKIDTTALETAAIRIPVLHAKWLAYRADARQLLIKAEMKMEAVRKDRWLFYSGKHD.DEVCDFI.....VEKS-EMKYALAGDEALQLAIARFQHMKDVLSFIEEALKGISQMGFTIKHIIDNRKIESG-i
#=GC SS_cons                    ............HHHHHHS--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSSSB--SS-.....--HH-HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTX.
#=GC seq_cons                   .............hc.Ds.hsshsLcptuhplshhauKaLsaauch++hllpl-tchcthhhhhhpaYuGcts.sph...p.....hpKS.EhKshluuDc-lhplpsphQphthllcaIEpuL-slsphGaslKphIDhRKa.sG..
//
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