GenomeNet

Database: Pfam
Entry: VCBS
LinkDB: VCBS
Original site: VCBS 
#=GF ID   VCBS
#=GF AC   PF13517.2
#=GF DE   Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
#=GF AU   Coggill P
#=GF SE   Jackhmmer:B8J4T8
#=GF GA   26.90 26.90;
#=GF TC   26.90 26.90;
#=GF NC   26.80 26.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Repeat
#=GF CC   This domain of about 100 residues is found in multiple (up to
#=GF CC   35) copies in long proteins from several species of Vibrio,
#=GF CC   Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS)
#=GF CC   and in smaller copy numbers in proteins from several other
#=GF CC   bacteria. The large protein size and repeat copy numbers,
#=GF CC   species distribution, and suggested activities of several member
#=GF CC   proteins suggests a role for this domain in adhesion (TIGR).
#=GF SQ   13922
#=GS X5JR45_9NOST/141-200        AC X5JR45.1
#=GS A0A025WSY8_ECO57/4646-4719  AC A0A025WSY8.1
#=GS B8FFY5_DESAA/521-594        AC B8FFY5.1
#=GS H0BCH9_9ACTO/241-306        AC H0BCH9.1
#=GS Q025B3_SOLUE/295-358        AC Q025B3.1
#=GS M7N3A9_9BACT/252-315        AC M7N3A9.1
#=GS K3VDR6_FUSPC/834-904        AC K3VDR6.1
#=GS I2GSR9_9BACT/725-794        AC I2GSR9.1
#=GS Q1D2F8_MYXXD/429-496        AC Q1D2F8.1
#=GS W0F0Y4_9SPHI/15-101         AC W0F0Y4.1
#=GS M7SK63_EUTLA/391-455        AC M7SK63.1
#=GS E8R616_ISOPI/577-638        AC E8R616.1
#=GS H8MXT1_CORCM/402-467        AC H8MXT1.1
#=GS E2Q7S1_STRC2/176-237        AC E2Q7S1.1
#=GS K3VDR6_FUSPC/1046-1116      AC K3VDR6.1
#=GS W7QDU2_9ALTE/94-168         AC W7QDU2.1
#=GS U3AMH6_9RHOB/278-349        AC U3AMH6.1
#=GS E1ZWJ9_CAMFO/325-393        AC E1ZWJ9.1
#=GS I5SDD5_ECOLX/4646-4719      AC I5SDD5.1
#=GS B7RJQ4_9RHOB/267-338        AC B7RJQ4.1
#=GS B8KPX9_9GAMM/313-384        AC B8KPX9.1
#=GS X0V3I9_9ZZZZ/27-94          AC X0V3I9.1
#=GS K4R7G0_9ACTO/134-209        AC K4R7G0.1
#=GS D3F2E4_CONWI/157-218        AC D3F2E4.1
#=GS Q0FNU1_PELBH/174-241        AC Q0FNU1.1
#=GS Q9Y7C6_ASPTE/698-773        AC Q9Y7C6.1
#=GS W9GHY3_9MICO/319-380        AC W9GHY3.1
#=GS A2TV56_9FLAO/34-127         AC A2TV56.1
#=GS Q1IUM0_KORVE/317-383        AC Q1IUM0.1
#=GS A0A023BTV4_9FLAO/705-774    AC A0A023BTV4.1
#=GS Q02BD5_SOLUE/2679-2742      AC Q02BD5.1
#=GS U0SUY4_ECOLX/4646-4719      AC U0SUY4.1
#=GS E1R0W3_SPISS/105-167        AC E1R0W3.1
#=GS X0M9Q8_FUSOX/551-614        AC X0M9Q8.1
#=GS Q1IMB9_KORVE/62-121         AC Q1IMB9.1
#=GS B6B2T1_9RHOB/76-138         AC B6B2T1.1
#=GS K6TPL9_LEPIR/324-392        AC K6TPL9.1
#=GS F4L4K5_HALH1/569-630        AC F4L4K5.1
#=GS F0YGA8_AURAN/99-159         AC F0YGA8.1
#=GS Y1NWH0_9ENTR/2607-2677      AC Y1NWH0.1
#=GS Q3LTM3_DANRE/309-386        AC Q3LTM3.1
#=GS B1ZY88_OPITP/381-444        AC B1ZY88.1
#=GS M5RY82_9PLAN/179-238        AC M5RY82.1
#=GS F0YDE3_AURAN/232-292        AC F0YDE3.1
#=GS R7ZMK0_9BACT/799-853        AC R7ZMK0.1
#=GS K8KIP8_9LEPT/382-450        AC K8KIP8.1
#=GS M6GRD9_9LEPT/382-450        AC M6GRD9.1
#=GS L7CFP6_RHOBT/550-620        AC L7CFP6.1
#=GS V4I097_9GAMM/436-505        AC V4I097.1
#=GS X0SR57_9ZZZZ/83-143         AC X0SR57.1
#=GS B5JKM1_9BACT/57-118         AC B5JKM1.1
#=GS S2E103_9BACT/713-769        AC S2E103.1
#=GS M1Z008_NITG3/91-151         AC M1Z008.1
#=GS A9VCP5_MONBE/350-411        AC A9VCP5.1
#=GS F2IJ54_FLUTR/430-490        AC F2IJ54.1
#=GS L7CPH0_RHOBT/508-578        AC L7CPH0.1
#=GS Q2S3E7_SALRD/436-498        AC Q2S3E7.1
#=GS G3SS90_LOXAF/62-132         AC G3SS90.1
#=GS V3HXD0_ENTCL/2487-2557      AC V3HXD0.1
#=GS M3G3V4_9LEPT/211-274        AC M3G3V4.1
#=GS H1Y295_9SPHI/667-733        AC H1Y295.1
#=GS F5RYD0_9ENTR/3007-3077      AC F5RYD0.1
#=GS X6GEV6_9RHIZ/3-64           AC X6GEV6.1
#=GS B5JL06_9BACT/251-314        AC B5JL06.1
#=GS U0RJR7_ECOLX/4761-4822      AC U0RJR7.1
#=GS S7V5Y9_9BACT/177-263        AC S7V5Y9.1
#=GS A0A024RWP2_HYPJE/333-403    AC A0A024RWP2.1
#=GS L0DC99_SINAD/449-512        AC L0DC99.1
#=GS X0V1L7_9ZZZZ/23-85          AC X0V1L7.1
#=GS K1YD45_9BACT/158-225        AC K1YD45.1
#=GS A0A017T6A3_9DELT/196-258    AC A0A017T6A3.1
#=GS E6QIK3_9ZZZZ/377-438        AC E6QIK3.1
#=GS M5T5B6_9PLAN/773-839        AC M5T5B6.1
#=GS A0A034UHS9_9NOCA/114-173    AC A0A034UHS9.1
#=GS E8X073_ACISM/440-503        AC E8X073.1
#=GS I9HWI6_9BACE/62-125         AC I9HWI6.1
#=GS A6G5I7_9DELT/167-229        AC A6G5I7.1
#=GS X1DC51_9ZZZZ/118-179        AC X1DC51.1
#=GS L8JT78_9BACT/452-520        AC L8JT78.1
#=GS U1Y362_9MICC/263-324        AC U1Y362.1
#=GS G2Z5E3_FLABF/122-190        AC G2Z5E3.1
#=GS R7ZQI4_9BACT/763-823        AC R7ZQI4.1
#=GS A0A024FGV3_9FLAO/623-686    AC A0A024FGV3.1
#=GS W2RXW2_9EURO/419-483        AC W2RXW2.1
#=GS A9A0T6_DESOH/78-151         AC A9A0T6.1
#=GS I1WMN2_BURP2/470-534        AC I1WMN2.1
#=GS G8SKN2_ACTS5/299-367        AC G8SKN2.1
#=GS F6RCT6_MACMU/55-118         AC F6RCT6.1
#=GS M4RXX9_9ALTE/270-330        AC M4RXX9.1
#=GS Y1CUD3_ENTCL/1938-2008      AC Y1CUD3.1
#=GS A8UJP2_9FLAO/208-259        AC A8UJP2.1
#=GS W7QG36_9ALTE/859-911        AC W7QG36.1
#=GS D6KE69_9ACTO/180-243        AC D6KE69.1
#=GS G6FR32_9CYAN/307-366        AC G6FR32.1
#=GS J4KSC8_9GAMM/136-199        AC J4KSC8.1
#=GS K1L9D8_9BACT/211-264        AC K1L9D8.1
#=GS M6NFP1_LEPIR/1074-1150      AC M6NFP1.1
#=GS V5TSD0_HALHI/106-169        AC V5TSD0.1
#=GS Y1LRZ9_9ENTR/4979-5042      AC Y1LRZ9.1
#=GS B3QTF5_CHLT3/340-404        AC B3QTF5.1
#=GS A0A025U3Z5_ECO57/4761-4822  AC A0A025U3Z5.1
#=GS L0D8D4_SINAD/45-102         AC L0D8D4.1
#=GS B5JCM9_9BACT/738-813        AC B5JCM9.1
#=GS B5JCM9_9BACT/31-112         AC B5JCM9.1
#=GS Q026H2_SOLUE/302-368        AC Q026H2.1
#=GS H0QNF8_ARTGO/495-556        AC H0QNF8.1
#=GS U8TC48_PSEAI/740-815        AC U8TC48.1
#=GS E1IEW0_9CHLR/188-249        AC E1IEW0.1
#=GS M7MLS7_9FLAO/408-477        AC M7MLS7.1
#=GS D2QIP4_SPILD/37-127         AC D2QIP4.1
#=GS M5V1L5_9LEPT/382-450        AC M5V1L5.1
#=GS U1ZYG6_9MICC/55-115         AC U1ZYG6.1
#=GS F4B1I9_KROS4/811-872        AC F4B1I9.1
#=GS K1VWG7_TRIAC/180-244        AC K1VWG7.1
#=GS Q7NDW2_GLOVI/628-687        AC Q7NDW2.1
#=GS A6G6D3_9DELT/395-476        AC A6G6D3.1
#=GS A9VDV1_MONBE/238-299        AC A9VDV1.1
#=GS L0FU86_ECHVK/264-327        AC L0FU86.1
#=GS A8ZY20_DESOH/628-704        AC A8ZY20.1
#=GS M3D9N6_9ACTO/169-235        AC M3D9N6.1
#=GS F5UNF9_9CYAN/404-465        AC F5UNF9.1
#=GS S0DZ45_GIBF5/909-975        AC S0DZ45.1
#=GS M5ZC68_LEPIR/213-274        AC M5ZC68.1
#=GS V7H8A0_9RHIZ/626-681        AC V7H8A0.1
#=GS M5ZYI0_LEPIR/1074-1150      AC M5ZYI0.1
#=GS G8TCP4_NIAKG/849-911        AC G8TCP4.1
#=GS W3VSV2_9BASI/193-258        AC W3VSV2.1
#=GS A0YMD7_LYNSP/491-557        AC A0YMD7.1
#=GS A2U4A3_9FLAO/233-296        AC A2U4A3.1
#=GS H1LBH5_GEOME/919-975        AC H1LBH5.1
#=GS X1BRP6_9ZZZZ/39-124         AC X1BRP6.1
#=GS M7X8M6_9BACT/443-527        AC M7X8M6.1
#=GS A9UZK7_MONBE/258-319        AC A9UZK7.1
#=GS F2B087_RHOBT/531-596        AC F2B087.1
#=GS W5N6T6_LEPOC/335-414        AC W5N6T6.1
#=GS A0YAG6_9GAMM/109-174        AC A0YAG6.1
#=GS B8IAR4_METNO/400-460        AC B8IAR4.1
#=GS E8JB12_ECO57/6498-6559      AC E8JB12.1
#=GS D2QL98_SPILD/853-915        AC D2QL98.1
#=GS A6FCH9_9GAMM/281-348        AC A6FCH9.1
#=GS W0F0Y4_9SPHI/800-860        AC W0F0Y4.1
#=GS B8LX80_TALSN/415-483        AC B8LX80.1
#=GS S7VH08_9BACT/12-84          AC S7VH08.1
#=GS A0A031V9T5_9ENTR/2607-2677  AC A0A031V9T5.1
#=GS A2U0E6_9FLAO/257-320        AC A2U0E6.1
#=GS Q5XQ52_9ARCH/294-353        AC Q5XQ52.1
#=GS M7EW35_9LEPT/428-497        AC M7EW35.1
#=GS A0A024FHT3_9FLAO/79-142     AC A0A024FHT3.1
#=GS S1SDV8_STRLI/122-191        AC S1SDV8.1
#=GS K4IHV8_PSYTT/122-185        AC K4IHV8.1
#=GS H0TIB5_9BRAD/315-386        AC H0TIB5.1
#=GS A5UW85_ROSS1/307-372        AC A5UW85.1
#=GS A0ZCF1_NODSP/355-417        AC A0ZCF1.1
#=GS L0D7I7_SINAD/1017-1078      AC L0D7I7.1
#=GS A9VDF6_MONBE/710-771        AC A9VDF6.1
#=GS A0A027DU20_ECO57/4761-4822  AC A0A027DU20.1
#=GS Q113P3_TRIEI/545-605        AC Q113P3.1
#=GS G8T7L2_NIAKG/792-864        AC G8T7L2.1
#=GS B5EAC8_GEOBB/928-990        AC B5EAC8.1
#=GS F0Y9J2_AURAN/63-120         AC F0Y9J2.1
#=GS A4AU08_MARSH/831-892        AC A4AU08.1
#=GS M5S366_9PLAN/99-171         AC M5S366.1
#=GS B5JID6_9BACT/267-330        AC B5JID6.1
#=GS B4D5G2_9BACT/563-628        AC B4D5G2.1
#=GS F2JVF6_MARM1/601-666        AC F2JVF6.1
#=GS A0A010Q8F5_9ALTE/220-287    AC A0A010Q8F5.1
#=GS S7V5Y9_9BACT/441-522        AC S7V5Y9.1
#=GS M5T9V9_9PLAN/804-864        AC M5T9V9.1
#=GS C3RVL5_9NOST/390-450        AC C3RVL5.1
#=GS S4WCB6_STRCH/415-477        AC S4WCB6.1
#=GS S0DZ45_GIBF5/1062-1132      AC S0DZ45.1
#=GS E8R0Z2_ISOPI/563-625        AC E8R0Z2.1
#=GS C3RVL5_9NOST/292-352        AC C3RVL5.1
#=GS B1ZQJ2_OPITP/203-260        AC B1ZQJ2.1
#=GS K6HIM4_9LEPT/165-229        AC K6HIM4.1
#=GS H0SNE7_9BRAD/231-302        AC H0SNE7.1
#=GS A0A025P2G0_ECO57/4646-4719  AC A0A025P2G0.1
#=GS A0A059G793_9RHOB/209-269    AC A0A059G793.1
#=GS F0YJ47_AURAN/1395-1453      AC F0YJ47.1
#=GS A9GDC9_SORC5/98-167         AC A9GDC9.1
#=GS L9CB46_ECOLX/4761-4822      AC L9CB46.1
#=GS B0XNC7_ASPFC/73-140         AC B0XNC7.1
#=GS B1ZY67_OPITP/290-357        AC B1ZY67.1
#=GS B5JID6_9BACT/103-167        AC B5JID6.1
#=GS M7NWT0_9BACT/396-464        AC M7NWT0.1
#=GS A9VCI7_MONBE/130-191        AC A9VCI7.1
#=GS S4Y8I5_SORCE/584-649        AC S4Y8I5.1
#=GS A0A023BX47_9FLAO/661-725    AC A0A023BX47.1
#=GS B5JGL0_9BACT/537-601        AC B5JGL0.1
#=GS M6B5W3_LEPIR/788-857        AC M6B5W3.1
#=GS A1ZJS6_9BACT/322-384        AC A1ZJS6.1
#=GS L5JQ20_PTEAL/288-352        AC L5JQ20.1
#=GS Q0C5N8_HYPNA/74-136         AC Q0C5N8.1
#=GS L8EYY5_STRRM/83-159         AC L8EYY5.1
#=GS I5YEI3_ECOLX/4646-4719      AC I5YEI3.1
#=GS Q11XP9_CYTH3/257-320        AC Q11XP9.1
#=GS A9VCP5_MONBE/100-161        AC A9VCP5.1
#=GS M6E2R8_9LEPT/263-336        AC M6E2R8.1
#=GS F3YXK7_DESAF/253-319        AC F3YXK7.1
#=GS B5JFN0_9BACT/425-512        AC B5JFN0.1
#=GS W0RHU1_9BACT/517-585        AC W0RHU1.1
#=GS U9Y8Y5_ECOLX/4689-4750      AC U9Y8Y5.1
#=GS F4U580_ECOLX/155-216        AC F4U580.1
#=GS F8ECB6_RUNSL/693-757        AC F8ECB6.1
#=GS B0C415_ACAM1/1294-1354      AC B0C415.1
#=GS Q7NM73_GLOVI/269-329        AC Q7NM73.1
#=GS A6G5I7_9DELT/348-410        AC A6G5I7.1
#=GS M7N6S4_9FLAO/255-314        AC M7N6S4.1
#=GS A4CY56_SYNPV/465-533        AC A4CY56.1
#=GS B0JT51_MICAN/146-206        AC B0JT51.1
#=GS D9XSN7_9ACTO/73-154         AC D9XSN7.1
#=GS L0DPF8_SINAD/632-688        AC L0DPF8.1
#=GS J4JPW0_9LEPT/325-393        AC J4JPW0.1
#=GS Y1MEP2_9ENTR/2065-2128      AC Y1MEP2.1
#=GS F0YNC4_AURAN/2051-2111      AC F0YNC4.1
#=GS R4PKX6_9BACT/303-373        AC R4PKX6.1
#=GS Q01TD2_SOLUE/50-113         AC Q01TD2.1
#=GS U1JUG6_9GAMM/381-443        AC U1JUG6.1
#=GS V4E1Z6_ECOLX/6383-6456      AC V4E1Z6.1
#=GS T7P0Z5_ECOLX/6498-6559      AC T7P0Z5.1
#=GS G0J5H0_CYCMS/54-129         AC G0J5H0.1
#=GS K9V5U1_9CYAN/155-214        AC K9V5U1.1
#=GS G5SPF3_9BACT/200-272        AC G5SPF3.1
#=GS M7X0M5_9BACT/132-185        AC M7X0M5.1
#=GS M7X277_9BACT/713-771        AC M7X277.1
#=GS F0KEP8_CLOAE/91-158         AC F0KEP8.1
#=GS R6E7A2_9BACE/585-649        AC R6E7A2.1
#=GS W0EHC6_9FIRM/370-437        AC W0EHC6.1
#=GS A0A027S0C2_ECO57/4646-4719  AC A0A027S0C2.1
#=GS F0Y8F2_AURAN/1098-1158      AC F0Y8F2.1
#=GS C3YSP9_BRAFL/312-382        AC C3YSP9.1
#=GS A0A022MCA2_9ACTO/311-373    AC A0A022MCA2.1
#=GS F6C4X4_SINMB/576-640        AC F6C4X4.1
#=GS G0L957_ZOBGA/735-792        AC G0L957.1
#=GS F3QS10_9BACT/1097-1166      AC F3QS10.1
#=GS E8R3G7_ISOPI/207-266        AC E8R3G7.1
#=GS A7NNN6_ROSCS/188-247        AC A7NNN6.1
#=GS D1W3W3_9BACT/567-632        AC D1W3W3.1
#=GS W4BKM4_9BACL/252-312        AC W4BKM4.1
#=GS A9V295_MONBE/527-589        AC A9V295.1
#=GS T0LHQ2_9BACT/199-257        AC T0LHQ2.1
#=GS H2SVD8_TAKRU/64-134         AC H2SVD8.1
#=GS A1ZRD6_9BACT/323-392        AC A1ZRD6.1
#=GS A9A0T2_DESOH/548-623        AC A9A0T2.1
#=GS Y1KR00_9ENTR/2012-2076      AC Y1KR00.1
#=GS G0IZR7_CYCMS/121-189        AC G0IZR7.1
#=GS A0A030WRR7_PSEAI/740-815    AC A0A030WRR7.1
#=GS G2PS17_MURRD/65-128         AC G2PS17.1
#=GS X1FZY0_9ZZZZ/233-294        AC X1FZY0.1
#=GS X1HYD8_9ZZZZ/1-63           AC X1HYD8.1
#=GS X1BIY0_9ZZZZ/106-165        AC X1BIY0.1
#=GS S3BLA4_9ACTO/393-474        AC S3BLA4.1
#=GS L9MSU1_9GAMM/2509-2585      AC L9MSU1.1
#=GS K9RDW6_9CYAN/263-326        AC K9RDW6.1
#=GS Q15VU0_PSEA6/224-289        AC Q15VU0.1
#=GS A6G6J2_9DELT/93-155         AC A6G6J2.1
#=GS K5CEN3_RHOBT/725-791        AC K5CEN3.1
#=GS R4LNB1_9ACTO/146-222        AC R4LNB1.1
#=GS Y1L8Q2_9ENTR/2666-2730      AC Y1L8Q2.1
#=GS E8WPB3_GEOS8/508-564        AC E8WPB3.1
#=GS F5UKV0_9CYAN/330-395        AC F5UKV0.1
#=GS N4UMU1_FUSC1/765-825        AC N4UMU1.1
#=GS D9VC07_9ACTO/144-212        AC D9VC07.1
#=GS R7XUM5_9ACTO/752-813        AC R7XUM5.1
#=GS A9V9R3_MONBE/255-307        AC A9V9R3.1
#=GS B5JJ98_9BACT/411-473        AC B5JJ98.1
#=GS K2Q9F3_9RHIZ/68-131         AC K2Q9F3.1
#=GS U5QK37_9CYAN/574-635        AC U5QK37.1
#=GS F4AIU0_GLAS4/509-575        AC F4AIU0.1
#=GS T2KLJ7_9FLAO/25-88          AC T2KLJ7.1
#=GS G1RW10_NOMLE/62-132         AC G1RW10.2
#=GS D3FEL0_CONWI/369-452        AC D3FEL0.1
#=GS F0K619_CLOAE/296-367        AC F0K619.1
#=GS M1YWZ1_NITG3/88-148         AC M1YWZ1.1
#=GS A6GA24_9DELT/376-446        AC A6GA24.1
#=GS M6BET8_LEPIR/160-224        AC M6BET8.1
#=GS C3RVQ6_9CYAN/155-215        AC C3RVQ6.1
#=GS U3AMH6_9RHOB/69-127         AC U3AMH6.1
#=GS B1WSA4_CYAA5/1212-1274      AC B1WSA4.1
#=GS I0H658_ACTM4/325-391        AC I0H658.1
#=GS C0BLB8_9BACT/822-885        AC C0BLB8.1
#=GS G8SDQ3_ACTS5/1307-1368      AC G8SDQ3.1
#=GS B1VN12_STRGG/523-591        AC B1VN12.1
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