GenomeNet

Database: Pfam
Entry: Viral_P18
LinkDB: Viral_P18
Original site: Viral_P18 
#=GF ID   Viral_P18
#=GF AC   PF04521.9
#=GF DE   ssRNA positive strand viral 18kD cysteine rich protein
#=GF AU   Mifsud W
#=GF SE   Pfam-B_2612 (release 7.5)
#=GF GA   25.90 25.90;
#=GF TC   25.90 27.00;
#=GF NC   24.80 25.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR007609;
#=GF SQ   24
#=GS VSR_SBWMN/17-134     AC Q06392.1
#=GS Q9WIE7_9VIRU/16-135  AC Q9WIE7.1
#=GS Q02475_9VIRU/28-137  AC Q02475.1
#=GS Q80876_BSMV/24-139   AC Q80876.1
#=GS Q88465_SBWMV/17-134  AC Q88465.1
#=GS VSR_PCV87/2-123      AC Q84688.1
#=GS Q2PCP0_9VIRU/17-134  AC Q2PCP0.1
#=GS Q8JV06_SBWMV/17-134  AC Q8JV06.1
#=GS Q83081_9VIRU/29-143  AC Q83081.1
#=GS Q9JGJ8_SBWMV/17-134  AC Q9JGJ8.1
#=GS VSR_BSMV/24-139      AC Q80874.1
#=GS Q9Q9P9_9VIRU/17-134  AC Q9Q9P9.1
#=GS Q9QCE5_9VIRU/17-134  AC Q9QCE5.1
#=GS Q779A2_SBWMV/17-134  AC Q779A2.1
#=GS Q9QBU5_9VIRU/16-133  AC Q9QBU5.1
#=GS Q86999_SBWMV/17-134  AC Q86999.1
#=GS B3IUI0_9VIRU/16-134  AC B3IUI0.1
#=GS Q9JGJ2_9VIRU/17-131  AC Q9JGJ2.1
#=GS Q9Q9Q1_9VIRU/17-134  AC Q9Q9Q1.1
#=GS G4XG11_BSMV/24-139   AC G4XG11.1
#=GS Q9DJG1_9VIRU/17-134  AC Q9DJG1.1
#=GS Q82719_9VIRU/2-123   AC Q82719.1
#=GS Q9Q9Q3_9VIRU/17-134  AC Q9Q9Q3.1
#=GS Q91QY5_9VIRU/16-133  AC Q91QY5.1
VSR_SBWMN/17-134                ...........KSIKCVSKYRISVY.KT..LGLD...VV..kCRLPADCGVNCGMPAA------------------FVLEQghpkltmdgYCGEKHrgYVLSGAWRHAQLRSLnaELD....TLEAREESLRAQ.I-KALSAGDHCPAVLAYVPKKLtKLK................
Q9WIE7_9VIRU/16-135             ........snv---ICVSKYRTSVY.KS..LGLV...PV..kCRLPADCGVNCGMPAA--FVLVKGHPE-------LSMDG.........FCGEKHrgYVVSGAWRMAQLQTLnaELD....KLEAREESLRSQ.I-RGLNEAIKASTAPVY-----.---apiklqklkve.....
Q02475_9VIRU/28-137             csakclrkatf------RRVRKQLAeEY..LKHD...LIpvsCQLNSFPGYHCGMISALEM-----DPSGK-----PVVMN.........FCGQKH..EALALALKAKDGAKL..RLE....YLERRFYQMKDV.YARRLDRI--------------.---aenlke..........
Q80876_BSMV/24-139              ..erkhvyset------RNKRLELY.KK.yLLEP...QK...CALNGIVGHSCGMPCSI--------AEEACD-QLPIVSR.........FCGQKH..ADLYDSLLKRSEQEL..LLE....FLQKKMQELKLShIVKMAKLE--------------.---sevnairksvassfe.
Q88465_SBWMV/17-134             ...........KSIKCVSKYRISVY.KT..LGLD...VV..kCRLPADCGVNCGMPAA------------------FVLEQghpkltmdgYCGEKHrgYVLSGAWRHAQLRSLnaELD....TLEAREESLRAQ.I-KALSAGDHCPAVLAYVPKKLtKLK................
VSR_PCV87/2-123                 ...........PKSEFFREERKRRV.AL..LGED...AV...CKLNGVCGYSCGMPPAVEKVSVPADTEEDVYMLIFPYEQ.........FCGEKH..FKLYESLKDVSDDEL..KLR....RLERQRETLLAS.FQQKLKRYDEKIALLSEKFKNL.RSK................
Q2PCP0_9VIRU/17-134             ...........KSVVCVSKYRHSVY.KV..LGLS...VV..kCRLPADCGVNCGMPAA----FVLENGH-----PRLTLDG.........YCGEKHkgYVISGAWRHAQLRTLneELD....KLEKREEFLKTQ.I-KLLSDSAKANTAPVYIPKKInRM-k...............
Q8JV06_SBWMV/17-134             ...........KSIKCVSKYRISVY.KT..LGLD...VV..kCRLPADCGVNCGMPAA------------------FILEQghpkltmdgYCGEKHrgYVLSGAWRHAQLRSLnsELD....ALEAREESLRAQ.I-KALSVGDHCPAVLAYVPKKLtKLK................
Q83081_9VIRU/29-143             ......etrag-----FKSERKRRA.EL..FAKHnltAK..tCGLNKFPAESCGMYANIAEHQLPDGTT------TLTIDD.........YCGSKH..YYQGGLLAVMSDTEL..KIRaaalKLEHQRATAVAK.----------------------.---giklakelaalrnssk
Q9JGJ8_SBWMV/17-134             ..........k-NVVCVSKYRHSVY.KV..LGLT...VV..kCRLPSDCGVNCGMPAA----FVLENGH-----PRLTLDG.........YCGEKHkgYVISGAWRHAQLRTLneELD....RLEKREEFLKTQ.I-KLLSDSAKANTAPVYVPKKInRM-k...............
VSR_BSMV/24-139                 ..erkhvyset------RNKRLELY.KK.yLLEP...QK...CALNGIVGHSCGMPCSI--------AEEACD-QLPIVSR.........FCGQKH..ADLYDSLLKRSEQEL..LLE....FLQKKMQELKLShIVKMAKLE--------------.---sevnairksvassfe.
Q9Q9P9_9VIRU/17-134             ..........k-NVVCVSKYRHSVY.KV..LGLS...VV..kCRLPADCGVNCGMPAA----FVLEDGHP-----RLTLDG.........YCGEKHkgYVISGAWRHAQLRTLndELD....KLEKRGEFLKTQ.I-RVLSETANANTAPVYAPKKInRM-k...............
Q9QCE5_9VIRU/17-134             ..........k-NVVCVSKYRHSVY.KV..MGLS...VV..kCRLPADCGVNCGMPAA----FVLEDGHP-----RLTLDG.........YCGEKHkgYVISGAWRHAQLRTLndELD....KLEKRGEFLKTQ.I-RVLSETANANTAPVYAPT--.---kinrmk..........
Q779A2_SBWMV/17-134             ..........k-NVVCVSKYRHSVY.KV..LGLS...VV..kCRLPADCGVNCGMPAA----FVLEDGHP-----RLTLDG.........YCGEKHkgYVISGAWRHAQLRTLndELD....KLEKRGEFLKTQ.I-RVLSETANANTAPVYAPT--.---kinrmk..........
Q9QBU5_9VIRU/16-133             .........tr--VVCVSKYRNSVY.KS..LGME...VV..kCRLPSACGVNCRMPAA--LVLVKGHPE-------LSMDG.........FCGEKHrgYVVSGAWRHAQLRSLnaELD....KLTEKEESLRTQ.I-IVLTAAAKTADAPVYVPKKLnKLK................
Q86999_SBWMV/17-134             ...........KSIKCVSKYRISVY.KT..LGLD...VV..kCRLPADCGVNCGMPAA------------------FVLEQghpkltmdgYCGEKHrgYVLSGAWRHAQLRSLnaELD....ALEAREESLRAQ.I-KALSAGDHCPAVLAYVPKKLtKLK................
B3IUI0_9VIRU/16-134             ........snv---ICVSKYRTSVY.KS..LGLD...PV..kCRLPADCGVNCGMPAA--FVLVKGHPE-------LSMDG.........FCGEKHrgYVVSGAWRSAQLRTLnaELD....KLVAREESLRSQ.I-RGLNEAIKTSTAPVYAPIK-.---lqklkv..........
Q9JGJ2_9VIRU/17-131             .........ts--LRCENKYRLSVY.QSrqVEKS...AY..aCKIS-QFGVPCGMPAQ---------FELDGETLKVVCDG.........YCGLKHknMAESGSWRGTLLVILqkELE....ALQLKEEQLKTR.IAEVTQQHDLVMAE--------.---taavlrp.........
Q9Q9Q1_9VIRU/17-134             ..........k-NVVCVSKYRHSVY.KV..LGLS...VV..kCRLPADCGVNCGMPAA----FVLEDGHP-----RLTLDG.........YCGEKHkgYVISGAWRHAQLRTLndELD....KLEKRGEFLKTQ.I-RVLSETANANTAPVYAPKKInRM-k...............
G4XG11_BSMV/24-139              ..erkhvyset------RNKRLELY.KK.yLLEP...QK...CALNEIVGHSCGMLCSI--------AEEACD-QLPIVSR.........FCGQKH..ADLYDSLLKRSEQEL..LLE....FLQKKMQELKLShIVKMAKLE--------------.---sevnairksvassfe.
Q9DJG1_9VIRU/17-134             ..........k-NVVCVSKYRHSVY.KV..LGLS...VV..kCRLPADCGVNCGMPAA----FVLEDGHP-----RLTLDG.........YCGEKHkgYVISGAWRHAQLRTLndELD....KLEKRGEFLKTQ.I-RVLSETANANTAPVYAPT--.---kinrmk..........
Q82719_9VIRU/2-123              ..........a-KSDFFREERKRRV.AI..LGEQ...AV...CKVNGVPGYSCGMPPAVEQVFVPVDNEEEAYMLVFPYDG.........CCGEKH..YKLYNSLADISDDDL..KLQ....CLERQRETLLTN.FQKKLKDYDSAIALLSEKFKKL.RSK................
Q9Q9Q3_9VIRU/17-134             ..........k-NVVCVSKYRHSVY.KV..LGLS...VV..kCRLPADCGVNCGMPAA----FVLEDGHP-----RLTLDG.........YCGEKHkgYVISGAWRHAQLRTLndELD....KLEKRGEFLKTQ.I-RVLSETANANTAPVYAPKKInRM-k...............
Q91QY5_9VIRU/16-133             ........snv---ICVSKYRTSVY.KS..LGLV...PV..kCRLPADCGVSCGMPAA--FVLVKGHPE-------LSMDG.........FCGEKHrgYVVSGAWRSAQLRTLnaELD....KLVAREESLRLQ.I-RGLNEAIKTSTAPVYAPI--.---klqklk..........
#=GC seq_cons                   ..........h...hCVSKYRpSVY.Ks..LGLs...sV..KCRLPuDCGVNCGMPAA.....l..psc......hhslDs.........aCGEKH+GYVlSGAWR+AQLRoLNtELD....pLE+RtEpL+sQ.I.+sLspsspssss.sYhPp......t...............
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