GenomeNet

Database: Pfam
Entry: Viral_P18
LinkDB: Viral_P18
Original site: Viral_P18 
#=GF ID   Viral_P18
#=GF AC   PF04521.8
#=GF DE   ssRNA positive strand viral 18kD cysteine rich protein
#=GF AU   Mifsud W
#=GF SE   Pfam-B_2612 (release 7.5)
#=GF GA   23.10 23.10;
#=GF TC   23.20 105.30;
#=GF NC   22.60 23.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR007609;
#=GF SQ   25
#=GS Q80876_BSMV/26-136   AC Q80876.1
#=GS Q9WIE7_9VIRU/15-134  AC Q9WIE7.1
#=GS Q86999_SBWMV/16-135  AC Q86999.1
#=GS Q91QY5_9VIRU/15-134  AC Q91QY5.1
#=GS Q9JGJ2_9VIRU/16-136  AC Q9JGJ2.1
#=GS Q8JV06_SBWMV/16-135  AC Q8JV06.1
#=GS G4XG11_BSMV/26-136   AC G4XG11.1
#=GS Q9Q9Q1_9VIRU/16-135  AC Q9Q9Q1.1
#=GS Q83081_9VIRU/31-144  AC Q83081.1
#=GS Q02475_9VIRU/35-144  AC Q02475.1
#=GS Q9QBU5_9VIRU/15-134  AC Q9QBU5.1
#=GS Q9Q9P9_9VIRU/16-135  AC Q9Q9P9.1
#=GS Q88465_SBWMV/16-135  AC Q88465.1
#=GS Q5S2C6_BSMV/26-136   AC Q5S2C6.1
#=GS Q9DJG1_9VIRU/16-135  AC Q9DJG1.1
#=GS Q9QCE5_9VIRU/16-135  AC Q9QCE5.1
#=GS Q82719_9VIRU/1-124   AC Q82719.1
#=GS B3IUI0_SBWMV/15-134  AC B3IUI0.1
#=GS VSR_BSMV/26-136      AC Q80874.1
#=GS VSR_SBWMN/16-135     AC Q06392.1
#=GS VSR_PCV87/1-124      AC Q84688.1
#=GS Q2PCP0_9VIRU/16-135  AC Q2PCP0.1
#=GS Q779A2_SBWMV/16-135  AC Q779A2.1
#=GS Q9JGJ8_SBWMV/16-135  AC Q9JGJ8.1
#=GS Q9Q9Q3_9VIRU/16-135  AC Q9Q9Q3.1
Q80876_BSMV/26-136              k-HVYSETRNKRLELYKKYLL..EPQKCALNGIVGHSCGMPCSIA....-EEACDQ.....LPIvSRFCGQKHADLYDSLLKR----SEQELLLEFLQKKMQELKLSHIV-----KMAKLESEVNAIRKSV--as.
Q9WIE7_9VIRU/15-134             f-SNVICVSKYRTSVYKSLGL..VPVKCRLPADCGVNCGMPAAFV....LVKGHPE.....LSM.DGFCGEKHRGYVVSGAWRMAQLQTLNAELDKLEAREESLRSQIRGLNEAIKASTAPVYAPIKLQKLKV...
Q86999_SBWMV/16-135             p-KSIKCVSKYRISVYKTLGL..DVVKCRLPADCGVNCGMPAAFV....LEQGHPK.....LTM.DGYCGEKHRGYVLSGAWRHAQLRSLNAELDALEAREESLRAQIKALSAGDHCPAVLAYVPKKLTKLK-a..
Q91QY5_9VIRU/15-134             f-SNVICVSKYRTSVYKSLGL..VPVKCRLPADCGVSCGMPAAFV....LVKGHPE.....LSM.DGFCGEKHRGYVVSGAWRSAQLRTLNAELDKLVAREESLRLQIRGLNEAIKTSTAPVYAPIKLQKLKV...
Q9JGJ2_9VIRU/16-136             r-TSLRCENKYRLSVYQSRQVekSAYACKISQF-GVPCGMPAQFE....LDGETLK.....VVC.DGYCGLKHKNMAESGSWRGTLLVILQKELEALQLKEEQLKTRIAEVTQQHDLVMAETAAVLRPDSP--pk.
Q8JV06_SBWMV/16-135             p-KSIKCVSKYRISVYKTLGL..DVVKCRLPADCGVNCGMPAAFI....LEQGHPK.....LTM.DGYCGEKHRGYVLSGAWRHAQLRSLNSELDALEAREESLRAQIKALSVGDHCPAVLAYVPKKLTKLK-a..
G4XG11_BSMV/26-136              k-HVYSETRNKRLELYKKYLL..EPQKCALNEIVGHSCGMLCSIA....-EEACDQ.....LPIvSRFCGQKHADLYDSLLKR----SEQELLLEFLQKKMQELKLSHIV-----KMAKLESEVNAIRKSV--as.
Q9Q9Q1_9VIRU/16-135             p-KNVVCVSKYRHSVYKVLGL..SVVKCRLPADCGVNCGMPAAFV....LEDGHPR.....LTL.DGYCGEKHKGYVISGAWRHAQLRTLNDELDKLEKRGEFLKTQIRVLSETANANTAPVYAPKKINRMK-a..
Q83081_9VIRU/31-144             r-AGFKSERKRRAELFAKHNL..TAKTCGLNKFPAESCGMYANIAe.hqLPDGTTT.....LTI.DDYCGSKHYYQGGLLAVMSD---------TELKIRAAALKLEHQRATAVAKGIKLAKELAALRNSSK-l..
Q02475_9VIRU/35-144             .KATFRRVRKQLAEEYLKHDL..IPVSCQLNSFPGYHCGMISALE....MDPSGKP.....-VV.MNFCGQKHEALALALKAK----DGAKLRLEYLERRFYQMKD-----VYARRLDRIAENLKEERNRLT-t..
Q9QBU5_9VIRU/15-134             f-TRVVCVSKYRNSVYKSLGM..EVVKCRLPSACGVNCRMPAALV....LVKGHPE.....LSM.DGFCGEKHRGYVVSGAWRHAQLRSLNAELDKLTEKEESLRTQIIVLTAAAKTADAPVYVPKKLNKLKV...
Q9Q9P9_9VIRU/16-135             p-KNVVCVSKYRHSVYKVLGL..SVVKCRLPADCGVNCGMPAAFV....LEDGHPR.....LTL.DGYCGEKHKGYVISGAWRHAQLRTLNDELDKLEKRGEFLKTQIRVLSETANANTAPVYAPKKINRMK-a..
Q88465_SBWMV/16-135             p-KSIKCVSKYRISVYKTLGL..DVVKCRLPADCGVNCGMPAAFV....LEQGHPK.....LTM.DGYCGEKHRGYVLSGAWRHAQLRSLNAELDTLEAREESLRAQIKALSAGDHCPAVLAYVPKKLTKLK-a..
Q5S2C6_BSMV/26-136              k-HVYSETRNKRLELYKKYLL..EPQKCALNEIVGHSCGMLCSIA....-EEACDR.....LPIvSKFCGQKHADLHDSLLKR----SEQELLLEFLQKKMQELKLSHIV-----KMAKLESEVNTIRES---ivs
Q9DJG1_9VIRU/16-135             p-KNVVCVSKYRHSVYKVLGL..SVVKCRLPADCGVNCGMPAAFV....LEDGHPR.....LTL.DGYCGEKHKGYVISGAWRHAQLRTLNDELDKLEKRGEFLKTQIRVLSETANANTAPVYAPTKINRMK-a..
Q9QCE5_9VIRU/16-135             p-KNVVCVSKYRHSVYKVMGL..SVVKCRLPADCGVNCGMPAAFV....LEDGHPR.....LTL.DGYCGEKHKGYVISGAWRHAQLRTLNDELDKLEKRGEFLKTQIRVLSETANANTAPVYAPTKINRMK-a..
Q82719_9VIRU/1-124              .MAKSDFFREERKRRVAILGE..QAV-CKVNGVPGYSCGMPPAVEqvfvPVDNEEEaymlvFPY.DGCCGEKHYKLYNSLA----DISDDDLKLQCLERQRETLLTNFQKKLKDYDSAIALLSEKFKKLRSKM...
B3IUI0_SBWMV/15-134             f-SNVICVSKYRTSVYKSLGL..DPVKCRLPADCGVNCGMPAAFV....LVKGHPE.....LSM.DGFCGEKHRGYVVSGAWRSAQLRTLNAELDKLVAREESLRSQIRGLNEAIKTSTAPVYAPIKLQKLKV...
VSR_BSMV/26-136                 k-HVYSETRNKRLELYKKYLL..EPQKCALNGIVGHSCGMPCSIA....-EEACDQ.....LPIvSRFCGQKHADLYDSLLKR----SEQELLLEFLQKKMQELKLSHIV-----KMAKLESEVNAIRKSV--as.
VSR_SBWMN/16-135                p-KSIKCVSKYRISVYKTLGL..DVVKCRLPADCGVNCGMPAAFV....LEQGHPK.....LTM.DGYCGEKHRGYVLSGAWRHAQLRSLNAELDTLEAREESLRAQIKALSAGDHCPAVLAYVPKKLTKLK-a..
VSR_PCV87/1-124                 m-PKSEFFREERKRRVALLGE..DAV-CKLNGVCGYSCGMPPAVEkvsvPADTEEDvymliFPY.EQFCGEKHFKLYESLK----DVSDDELKLRRLERQRETLLASFQQKLKRYDEKIALLSEKFKNLRSK-l..
Q2PCP0_9VIRU/16-135             p-KSVVCVSKYRHSVYKVLGL..SVVKCRLPADCGVNCGMPAAFV....LENGHPR.....LTL.DGYCGEKHKGYVISGAWRHAQLRTLNEELDKLEKREEFLKTQIKLLSDSAKANTAPVYIPKKINRMK-a..
Q779A2_SBWMV/16-135             p-KNVVCVSKYRHSVYKVLGL..SVVKCRLPADCGVNCGMPAAFV....LEDGHPR.....LTL.DGYCGEKHKGYVISGAWRHAQLRTLNDELDKLEKRGEFLKTQIRVLSETANANTAPVYAPTKINRMK-a..
Q9JGJ8_SBWMV/16-135             p-KNVVCVSKYRHSVYKVLGL..TVVKCRLPSDCGVNCGMPAAFV....LENGHPR.....LTL.DGYCGEKHKGYVISGAWRHAQLRTLNEELDRLEKREEFLKTQIKLLSDSAKANTAPVYVPKKINRMK-a..
Q9Q9Q3_9VIRU/16-135             p-KNVVCVSKYRHSVYKVLGL..SVVKCRLPADCGVNCGMPAAFV....LEDGHPR.....LTL.DGYCGEKHKGYVISGAWRHAQLRTLNDELDKLEKRGEFLKTQIRVLSETANANTAPVYAPKKINRMK-a..
#=GC seq_cons                   ..+slhCVSKYRtSVYKsLGL..ssVKCRLPuDCGVNCGMPAAFV....LEcGHPc.....Loh.DGaCGEKH+GYVlSGAWRpAQLRoLNtELDpLE+RtEpLKsQI+sLotst+sssA.sYsPpKls+hK.A..
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