GenomeNet

Database: Pfam
Entry: YjcQ
LinkDB: YjcQ
Original site: YjcQ 
#=GF ID   YjcQ
#=GF AC   PF09639.9
#=GF DE   YjcQ protein
#=GF AU   Coggill P
#=GF SE   pdb_2hgc
#=GF GA   23.30 23.30;
#=GF TC   23.60 23.80;
#=GF NC   23.20 23.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 26740544 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   15033535
#=GF RT   Systematic analysis of SigD-regulated genes in Bacillus subtilis
#=GF RT   by DNA microarray and Northern blotting analyses. 
#=GF RA   Serizawa M, Yamamoto H, Yamaguchi H, Fujita Y, Kobayashi K,
#=GF RA   Ogasawara N, Sekiguchi J; 
#=GF RL   Gene. 2004;329:125-136.
#=GF RN   [2]
#=GF RM   15016546
#=GF RT   The prophages of Lactobacillus johnsonii NCC 533: comparative
#=GF RT   genomics and transcription analysis. 
#=GF RA   Ventura M, Canchaya C, Pridmore RD, Brussow H; 
#=GF RL   Virology. 2004;320:229-242.
#=GF DR   INTERPRO; IPR018597;
#=GF CC   YjcQ is a protein of approx. 100 residues containing four alpha
#=GF CC   helices and three beta strands. It is expressed in bacteria and
#=GF CC   also in viruses. It appears to be under the regulation of SigD
#=GF CC   RNA polymerase which is responsible for the expression of many
#=GF CC   genes encoding cell-surface proteins related to flagellar
#=GF CC   assembly, motility, chemotaxis and autolysis in the late
#=GF CC   exponential growth phase. The exact function of YjcQ is unknown
#=GF CC   [1]. However, it is thought to be a prophage head protein in
#=GF CC   viruses [2].
#=GF SQ   72
#=GS F7V709_CLOSS/16-53       AC F7V709.1
#=GS A0A0E3UUN9_9FUSO/38-133  AC A0A0E3UUN9.1
#=GS B8I8U0_CLOCE/10-94       AC B8I8U0.1
#=GS A0A133XQR9_9ACTN/1-92    AC A0A133XQR9.1
#=GS U7UKH4_9FIRM/22-111      AC U7UKH4.1
#=GS A0A0Q9YFP3_9BACI/4-91    AC A0A0Q9YFP3.1
#=GS F9VIQ3_ARTSS/11-109      AC F9VIQ3.1
#=GS R6AGU8_9FIRM/12-105      AC R6AGU8.1
#=GS U1GUZ1_TRESO/18-118      AC U1GUZ1.1
#=GS A0A075KC10_9FIRM/7-102   AC A0A075KC10.1
#=GS A0A133YTV9_9FIRM/9-103   AC A0A133YTV9.1
#=GS C7MPB3_CRYCD/11-103      AC C7MPB3.1
#=GS E4KQ92_9LACT/11-97       AC E4KQ92.1
#=GS W4D585_9BACL/5-81        AC W4D585.1
#=GS A0A0M2PCX7_9BACI/8-105   AC A0A0M2PCX7.1
#=GS A0A0L0WF33_CLOPU/8-103   AC A0A0L0WF33.1
#=GS F7UWJ1_EEGSY/11-107      AC F7UWJ1.1
#=GS U2JT34_9FIRM/11-110      AC U2JT34.1
#=GS R6HIB3_9ACTN/11-80       AC R6HIB3.1
#=GS R6NR22_9CLOT/8-102       AC R6NR22.1
#=GS F7NGE1_9FIRM/7-102       AC F7NGE1.1
#=GS C2KWG9_9FIRM/8-103       AC C2KWG9.1
#=GS A0A075JJE1_9BACI/4-92    AC A0A075JJE1.1
#=GS J5UL11_9FIRM/8-100       AC J5UL11.1
#=GS A0A124EGU1_9ACTN/9-96    AC A0A124EGU1.1
#=GS I7IZF4_9LACO/1-58        AC I7IZF4.1
#=GS R9KXX7_9FIRM/8-104       AC R9KXX7.1
#=GS A0A0A0X0T5_9SPIO/9-106   AC A0A0A0X0T5.1
#=GS C7MM64_CRYCD/11-103      AC C7MM64.1
#=GS A0A062XBY1_9LACO/1-68    AC A0A062XBY1.1
#=GS A0A069RIE2_CLOLI/8-104   AC A0A069RIE2.1
#=GS E6U3U0_ETHHY/87-177      AC E6U3U0.1
#=GS A0A0A0WZ27_9SPIO/20-111  AC A0A0A0WZ27.1
#=GS C4F8C8_9ACTN/11-106      AC C4F8C8.1
#=GS A0A0X8JT98_9FUSO/8-103   AC A0A0X8JT98.1
#=GS E5BHZ7_9FUSO/9-104       AC E5BHZ7.1
#=GS A0A0N0VNQ2_9BACI/11-97   AC A0A0N0VNQ2.1
#=GS F4LSP5_TEPAE/8-104       AC F4LSP5.1
#=GS R9MAF9_9FIRM/8-102       AC R9MAF9.1
#=GS YJCQ_BACSU/4-92          AC O31639.1
#=GS YJCQ_BACSU/4-92          DR PDB; 2HGC A; 5-82;
#=GS A0A0M1V0W3_CLOSO/3-91    AC A0A0M1V0W3.1
#=GS G1WGI6_9ACTN/11-105      AC G1WGI6.1
#=GS A0A101WM28_9FIRM/4-88    AC A0A101WM28.1
#=GS D2RJS3_ACIFV/1-82        AC D2RJS3.1
#=GS U2DVQ8_CLOS4/2-86        AC U2DVQ8.1
#=GS C7GYV1_9FIRM/11-106      AC C7GYV1.1
#=GS A0A0D4CJ13_9LACO/11-106  AC A0A0D4CJ13.1
#=GS R5X8J2_9FIRM/11-107      AC R5X8J2.1
#=GS Q7P5S3_FUSNV/6-101       AC Q7P5S3.1
#=GS A0A0V8J8Y9_9BACI/4-92    AC A0A0V8J8Y9.1
#=GS F7V711_CLOSS/3-86        AC F7V711.1
#=GS N1ZXY3_9FIRM/8-104       AC N1ZXY3.1
#=GS A0A154BM87_9FIRM/6-91    AC A0A154BM87.1
#=GS G2FW86_9FIRM/5-89        AC G2FW86.1
#=GS K6DM73_9BACI/9-74        AC K6DM73.1
#=GS A0A120KPB5_9FUSO/8-103   AC A0A120KPB5.1
#=GS E6MH26_9FIRM/9-59        AC E6MH26.1
#=GS E0E3V7_9FIRM/8-99        AC E0E3V7.1
#=GS A0A117SK07_9FIRM/9-104   AC A0A117SK07.1
#=GS A0A0X8F9B2_9LACT/11-110  AC A0A0X8F9B2.1
#=GS C8PDE3_9LACO/11-110      AC C8PDE3.1
#=GS R6M2H2_9FIRM/8-101       AC R6M2H2.1
#=GS G9YWE1_9FIRM/11-109      AC G9YWE1.1
#=GS R9LQ45_9FIRM/11-108      AC R9LQ45.1
#=GS F7V714_CLOSS/20-115      AC F7V714.1
#=GS F7V708_CLOSS/1-59        AC F7V708.1
#=GS Q5FM49_LACAC/22-118      AC Q5FM49.1
#=GS B2A5C4_NATTJ/11-106      AC B2A5C4.1
#=GS F7V702_CLOSS/11-101      AC F7V702.1
#=GS R5KEQ8_9CLOT/11-73       AC R5KEQ8.1
#=GS Q65PQ3_LACJO/11-106      AC Q65PQ3.1
#=GS A0A073IQ60_9BACT/8-84    AC A0A073IQ60.1
F7V709_CLOSS/16-53                  ..............YQVLKYMYDCLKAGEKVE.....AV..R..L..TADA....YMIPENYWGYI--------------------...-...--..-.-..-..---...--------------.......----------------y................
A0A0E3UUN9_9FUSO/38-133             ..............YKILKIIDNGYKNKQPI-.....--..N..F..DLKS....LNITEHELGLYLHNLIEANYIEGIIVSKALNqtyF...EK..Y.R..F..YQY...ARLTLDGMLFYESN.......TTIKRFCKNLKET---vef..............
B8I8U0_CLOCE/10-94                  .............iYSILKEVESG--------.....NK..N..L..THED....YDIEFDLFWDISIMIRDAGLLKGVRFTL---...-...DP..R.V..A..FEN...SQITFEGLNYLKSN.......SALSKTYKGLKAIREW.................
A0A133XQR9_9ACTN/1-92               ..............--MLKTLQKATDYDEGAD.....PD..S..L..SAQA....LGISSNRLKALWHMLSQEGYVECVDVGSFQN...G...GL..-.T..W..SKR...RTITIKGLEYLCEN.......SLMKKAALAEKGI---va...............
U7UKH4_9FIRM/22-111                 .............f-KVLLYYYAVLKRKISFE.....--..K..M..TFDKvigiNDISEEYFIEVLLMMQEDGYIKNLVVKKAWG...G...DY..I.L..LsdFDE...IKITSKGIEYLKEN.......SKMQK-----------e................
A0A0Q9YFP3_9BACI/4-91               .........kkirl-AILKELEKG--------.....NK..K..F..TNED....FEISIDDLINILNWLKEEELINDYKFFYD--...-...-E..S.F..W..FEK...TEVTLRGEQYLNEN.......SAALKTYKGLKEIRDW.................
F9VIQ3_ARTSS/11-109                 ..............YKLLSYLYSCLKKGTYVD.....IE..N..L.rDVIK....VDIVDSYWNYIILELYKEGYIDGITKIKYIGd.iN...EN..V.K..I..NKN...IRIKPKGIEFLESN.......SFVAKAKEFIKEAGE-i................
R6AGU8_9FIRM/12-105                 .............i--ILSYMYECLKTGKQVK.....LE..L..M..NPEA....LKLCDNYWMYIIRHLVKDGYIEGVLCTHTKE...G...-Y..S.F..T..FDD...INITPKGIEYLQEN.......SYMQKAKETVRS----lanf.............
U1GUZ1_TRESO/18-118                 ..............YKLLNRLEKSLDVDKETHrgfkiSD..E..I..GHEA....LDISYPRWKEYITMLRDAGYIDGVRIKSFID...G...TS..S.V..D..ISE...IRITLQGLQYLAEN.......TMMLRTYKMIKGIKDI.................
A0A075KC10_9FIRM/7-102              .............q-KVLIAIYTEYQKDIPD-.....MA..S..I..TSSN....LGIDHDIFKIALDKLDNEGLVNGLNILKGGYr.sI...PK..Q.V..I..IHH...AKMSSYGINYVE--.......----------------tklniqpslsnkekvkv
A0A133YTV9_9FIRM/9-103              ..............YKILSILKSSLDNLKCD-.....ID..R..L..SPQS....LNISIEKRDNIIELLLDKNLIKGVIIKKYQD...G...DS..V.L..V..LND...IKITLDGLEYLEEN.......SIMKKMYKLAKGIKD-v................
C7MPB3_CRYCD/11-103                 ..............YKVLAYIMACAKADVAPS.....IA..K..A..R-EI....SKAGSVYWAMVARSMVADGLIVGVSVETYYD...G..tSE..V.T..A..GTD...FGITQRGAQYLRDN.......AKMREAAHL-------lgsa.............
E4KQ92_9LACT/11-97                  ..............FKVLSYFYNQKKNGKEIK.....EE..N..I..NAYK....LQVNQTYLMDIYKELFEEGYLKGGHVRSYMD...G...SI..Q.L.dN..FED...IRITIAGVEFLKEN.......NQMKK-----------s................
W4D585_9BACL/5-81                   ....ekiyailkri-------E---------A.....EQ..A..V..NQEV....MELEAEAFADIMEELIDSRMVENIKISRSGS...G...IV..T.V..R..TTD...IKLTRRGHDFI---.......----------------llkesg...........
A0A0M2PCX7_9BACI/8-105              ............qq--VLVAIYTEYQKDLPN-.....MS..S..V..NHES....LEMDEEIFVVALEKLLNEGLIIDVDFYLG--...G...--..D.Y..S..LQT...TKMTSYGLNYVEEKlgieptlSGAEKVKE--------vakqatqf.........
A0A0L0WF33_CLOPU/8-103              ..............YKILERLDKAMDEERFD-.....WN..E..I..DHNT....FGITKIRWVRIMHIMNENGFIDGVSIVNTIG..qK...NS..E.V..R..FID...IRITLKGLEYLAEN.......SNMGKLITTAKLLKDI.................
F7UWJ1_EEGSY/11-107                 ..............YKILAYLYDCMKKGEEPQ.....NS..M..I..SYDSd..lLGIPAAYWNQIMAQMVELGLVKGIAVRYYDN...-...SP..T.V..L..ISK...PYVTLEGVQFMQEN.......SMMSKALKFLKESKA-a................
U2JT34_9FIRM/11-110                 ..............YQILSYLYNCLKKGIDIE.....PD..Y..L..IANGk..lFNINSNYWRFIIYNLHKDGLIDGISLVYTWG..dK...YP..H.I..N.dLTN...IGITPKGIQFLTDN.......SFIQKSKELLKDVK--gi...............
R6HIB3_9ACTN/11-80                  ..............FKILSYLYRRMKSGKKVD.....IA..A..L..R-QL....VGCNETYFGAVVRSLQSKGLVEGCDLRERE-...-...--..-.-..-..---...--------------.......----------------lanaqgkglcrarir..
R6NR22_9CLOT/8-102                  ..............YKILKKLEKAMDLDEFS-.....ID..D..V..SAEV....LKISESRWAAIIEMLCENGYIAGVTVQRSVD...G...EI..Q.I..S..ESS...LRITLKGLEYLSDN.......SFMKKAANVAKGIV--et...............
F7NGE1_9FIRM/7-102                  kvlvavyvelnsva----------------PQ.....PG..Q..I..SPAS....LQMEEESFQRAINILYTEGLISGASIKIGDDe.aN...PT..Q.V..S..IDD...VLITRAGVSFMESY.......T---------------gishqlpkldklqkl..
C2KWG9_9FIRM/8-103                  ..............YRILSILHKAMDLEEWD-.....SK..L..L..SPEA....LDISLPMWSRLMAILLKEGYIAGGEVWESFD..vS...YP..K.V..K..LVR...PEITLKGLEYLEEN.......SLMKKAGEMLKEV---ihi..............
A0A075JJE1_9BACI/4-92               .............n-----KLRYAILKEIDSD.....NK..A..L..TEED....FAVTADQFDDAIRFLSRENYLMGVFYADD--...-...RP..W.L..F..EGT...AYLTEDGENYLKEN.......SSFTKTYRGLKEIRDW.................
J5UL11_9FIRM/8-100                  ..............YKILKNLESA--KDVEYM.....GT..L..I..SPEH....LNVSDEEWLMVMKNLLEEGYIRGVDISKNVL...G...ET..K.V..N..IEE...ARITLKGAQYLHEN.......SAMQKFMRIA------tnvit............
A0A124EGU1_9ACTN/9-96               .............r--ILGAIRSC--EGRPFD.....VA..A..V..SPEA....MGVSEEQRDVLACKLQRAGKVDGLITTEDID...GaplRV..L.W..A..QSS...PEVTLDGLEYMA--.......----------------treplrsaar.......
I7IZF4_9LACO/1-58                   ..............------------------.....--..-..-..----....-------------MLLDDGYITGVSLERTVN...G...PI..V.V.nN..IQN...TEITSKGLQYLEEN.......SMMKKVCKVLKEFRAW.................
R9KXX7_9FIRM/8-104                  ..............YKILRELEKNMGNERFN-.....IE..T..V..SAEK....LKISFEKWEQLLILMQDEGYIKGLVLSKDLGq.mY...RH..I.A..E..PIK...PQITIRGLEYLAGN.......SFMGKAKEALKMAGE-i................
A0A0A0X0T5_9SPIO/9-106              ..............YTLLNRLEKGLDYEDFDA.....EK..E..I..SPKA....LKITENRWNAYIKMLNDAGYITGVRIDDYIN...G...EV..D.I..D..ISE...ISLTLQGLQYLAEN.......TMMVRMWNAFKTVKE-vkd..............
C7MM64_CRYCD/11-103                 ..............YKVLAYIMACAKADVVPS.....IA..K..A..R-EI....SKAGSVYWAMVARSMVADGLIVGVSVETYYD...G..tSE..V.T..A..GTD...FGITQRGAQYLRDS.......SKMREAAHL-------lgsa.............
A0A062XBY1_9LACO/1-68               .............m--------NCYKNDLDIN.....ID..S..L..NASM....LDVSNRQLYETMKMLSEYGYVKGMEFMDVISl.eN...SV..L.N..H..PRN...WHITSQG-------.......----------------.................
A0A069RIE2_CLOLI/8-104              .............v-KVLEKLDKSLDENEPE-.....FS..D..I..RPDA....LEISSERWAYILEMMQDACLIKGVAFSRGGR...Gr.aPL..A.T..H..IDN...MQITLMGVRYIDEN.......TTTAKIVKAAKLLKDT.................
E6U3U0_ETHHY/87-177                 .......seiikll----------LEKYQSGD.....AS..N..I..DPAE....YGVDRIRLLEIVDIMEKGNLIKGASITRAGQ...G...NK..I.V..YgwPEQ...ARITLQGINYLQGR.......SAT-------------mtnqttyni........
A0A0A0WZ27_9SPIO/20-111             ..............YEILSRLERKLDNVEKP-.....--..D..I..SSKT....LCITEARRDAYIKMLEEEGYITGSRCKRTVE...G...ED..H.V..I..ANK...ARITLKGLQYLVEN.......KQMLRC----------fnedrkvin........
C4F8C8_9ACTN/11-106                 ..............YRIIAYLYDCMKRGVEPE.....DA..M..W..SSHA....MGIPESYWTSIVEQLVSHGYITGVGIEEYFG...G...ER..M.V..S..IFR...PEVTMEGLAFAEEN.......SMMGKARKFLQDAK--aa...............
A0A0X8JT98_9FUSO/8-103              ..............FRILKAIDVAYENNNFNL.....EE..T..L..NLEK....LGISERRLILMLEQLKEKNYITGISTVNSVT...G...YI..H.I..S..INN...PRLTLDGMDFLENN.......TAMKKAYKMLKEAKEW.................
E5BHZ7_9FUSO/9-104                  ..............YKILRTIDYCYSKKIMI-.....--..K..F..DLEK....LGLSQHELGLYLHNLVEAGYIGGIIISQAFGqthF...EK..Y.R..A..HEY...AYITLSGMMFLEEN.......SEMKNFYKTITEIRDW.................
A0A0N0VNQ2_9BACI/11-97              ..............YSILKEIEKG----NEP-.....--..-..-..KRED....YGLEFEQWGELAELIRDCGFVRNLGVMYAND...V...VY..I.V..S..FSS...AKITIQGLDYLEEN.......SVFARTYKGLKEVRDW.................
F4LSP5_TEPAE/8-104                  ..............YKILQKLDETLDENNPD-.....FT..D..L..SPES....LGISEERRNYILEMMQDAGLIKGVNFIRDGNn.rA...PI..M.A..F..LDN...MKITLKGIEYLAEN.......SSTAKILRAAKEIKD-l................
R9MAF9_9FIRM/8-102                  ..............YKILSALEKSMDMGGID-.....VN..C..I..SAEQ....LKVSQERWNRYMEMLTDAGYIKGVSIKKYVT...G...DI..V.I..N..IDE...IRITLKGLEYLSEN.......SIMQRMYKAAKGFTD-l................
YJCQ_BACSU/4-92                     ............dk------LRYAILKEIFEG.....NT..P..L..SEND....IGVTEDQFDDAVNFLKREGYIIGVHYSDD--...-...RP..H.L..Y..KLG...PELTEKGENYLKEN.......GTWSKAYKTIKEIKDW.................
#=GR YJCQ_BACSU/4-92          SS    ............X--------HHHHHHHHHHH.....-S..-..-..-HHH....HTS-HHHHHHHHHHHHHHTSEE--EESSS--...-...SE..E.-..-..SS-...-EE-HHHHHHHHHH.......T-S---XXXXXXXXXX.................
A0A0M1V0W3_CLOSO/3-91               ............ke-----KLRYAMLKEIDKG.....NV..P..L..SEQD....FNVEEDIFDEAAWFLQREGYLIGVGKGDD--...-...-R..A.W..I..EID...TKLTEKGERYLKEN.......STLAKGYKGLKEFKSW.................
G1WGI6_9ACTN/11-105                 ..............YTILKYLYECLKSGIDPD.....PL..K..F..SAEA....LGINERYWTAIVADLANRGYIRGVVVVHKPS...G...-D..V.V..Q..VVN...PSVTIEGVEFMMEN.......SMMQKALDFVKEAK--sa...............
A0A101WM28_9FIRM/4-88               .......kkliysv---LREIEKG--------.....-E..N..I.pKFSD....FGISLIEFRDLIDQIQDDDLIKGASVPRGSG...N..pDQ..M.V..L..LNT...AKVTLKGLEYLEKN.......SAFA------------esiq.............
D2RJS3_ACIFV/1-82                   ..........mknf-----------------D.....DE..N..F..TASH....FAVSDALFLNILQSLIEAGYIGGIKIVTDKC...G...-S..A.I..S..LIS...PHLSLSGMEYLADN.......TMMKKAYRLLKGIRD-v................
U2DVQ8_CLOS4/2-86                   .....revndgnip------------------.....--..-..-..RAAD....YGITDKEFWEIIDACQDDGLIKGARFSRGGQ...G...NPilV.A..F..LDG...VTLTVKGLEYLDEH.......SAAMRAYKGLKELRDW.................
C7GYV1_9FIRM/11-106                 ..............FKVLTELYTALRTGERIE.....VT..K..I..TDEA....LRIPQAYWAEIMHNLLDDGYVKGYSVRRYLS...G...TA..I.T..G..LED...IQITPKGIEYLKEN.......NMMRKVFTYLKEIGE-l................
A0A0D4CJ13_9LACO/11-106             ..............YKILSYLKFCYENGQTPD.....PN..V..L..NADT....FNVSKVQFGNTLEMLADHGYISGIQFHNTKM...G...KT..Y.S..S..LLD...LRITIEGLQYLAEN.......SMMKKAYRIFKEVKDW.................
R5X8J2_9FIRM/11-107                 ..............YKILKYLYESIKAGHRAA.....LS..E..VawHCEL....FDITRDYWLYIMHDLIERELVSGLKYVDAKD...M...ES..V.L..K..VGT...FAITQVGREYLKEN.......NLMQKVKSLL------geafk............
Q7P5S3_FUSNV/6-101                  ..............FQILKAIDVAFENQDFNY.....ET..T..L..DLKK....LKISKHRLELFIEELVDKNYIKGLTVRHSIN...G...NP..I.I..S..IGN...PRLTLDGLDFLENN.......SSMKKAYKFLKEAKEW.................
A0A0V8J8Y9_9BACI/4-92               .........kklrf-AILKEIDA--------G.....NA..P..L..NEHD....FSVSEEEFDEAINFLTREKYLIGITWGD---...N...RP..I.V..S..LIG...PIVTEKGETYLEEN.......SLLAKAYKGLKEAREW.................
F7V711_CLOSS/3-86                   ..............YRILRYIDICLKSGKTPT.....KE..D..IlrDCQL....YKLSESYADALLEEVSDDGYVKGISIVSTKD...G...GV..V.I..V..HDN...VRIRLTGRNYLTE-.......----------------ven..............
N1ZXY3_9FIRM/8-104                  ..............YKILRSLEKNMGNDEFD-.....IK..S..V..SAER....TNISFERWEQLLIMMQDEGYIKGLVLSSGLS...St.yRH..I.T..E..PIR...PQITIKGLEYLAEN.......SLMRKAKEALKMAGE-i................
A0A154BM87_9FIRM/6-91               .............r--ILLAIYREYRKGNSDM.....RR..S..V..RHDG....LQLDPGSFNQDIQSLQSEGLIRGAVLVRDRS..kN..yPD..Q.V..I..LNQ...VAVTHYGLHYLRRN.......L---------------lakt.............
G2FW86_9FIRM/5-89                   .............k--IIYNVLSAIKKGENL-.....-S..K..L..KFSD....FGLSLIEFRDLIDQIQDDDLIKGASVPRGQG...N..pDR..M.V..L..LEA...SKITLKGLAYLEKN.......STL-------------vetk.............
K6DM73_9BACI/9-74                   ..silrqlgdgkqp------------------.....--..-..-..KHED....YNVDEELWRSTASFLKDEGYIKNITISKNTK...-...--..-.-..-..YMF...AELTQDGEEYLKEK.......S---------------i................
A0A120KPB5_9FUSO/8-103              ..............FRILKAIDVAYEENNFNF.....DE..T..L..NLKK....LGISERRLILMLEQLKEKNYITGISTITSIS...G...HI..H.I..G..INN...PRLTLEGMDFLENN.......TAMKKAYKMLKEAKEW.................
E6MH26_9FIRM/9-59                   ..............YRILSILEKSMNYPEFD-.....PD..S..I..SAKT....LGVSEERWRLCIQMMADDGYVTDVQ------...-...--..-.-..-..---...--------------.......----------------i................
E0E3V7_9FIRM/8-99                   ..............YKILVGIEASMDSNRFD-.....GT..F..-..-LEA....LKISEERRNKILQSMIDDGLIDGFTRVNYAG...G...-Y..G.F..K..ALE...HRLTIKGMEFLQEN.......SAMQKIKNGLKDIKD-v................
A0A117SK07_9FIRM/9-104              ..............YKILKTLEQEMDTEGFD-.....FD..S..I..SHEV....LKISELRWTRLMQMLIENHYIDGVEEIYMMG..qT...YP..E.F..K..NMD...VRITLEGLQYLEEN.......SMMTKIKNAVKEIKD-f................
A0A0X8F9B2_9LACT/11-110             ..............FKLLVYFYACLKRVTVFK.....QE..EfdL..ITKK....AGVNEQYLLDILHMMQNEGLIEGLSFTMAWGk.vL...IL..V.G..N..VSD...AKITAEGIRYLKEN.......GQMKKVLAFL------idkadt...........
C8PDE3_9LACO/11-110                 ..............FKLLVYFYACLKRVTVFK.....QAefD..L..ITKK....AGVDERYLLDILRMMQDEVLIEGLAFTKAWG...E...EL..I.LlgN..VSD...AKITAEGIHYLQDN.......GRMKKVLAFL------idkadt...........
R6M2H2_9FIRM/8-101                  ..............YKILKVLESAMDCDEVD-.....RS..L..L..KAEN....FKITENRFENIIRMLAKEEYITGVIIVDMIG...-...IQ..G.I..K..FDD...VRITLKGLEYLSEN.......SLMKKAANLAKSIKET.................
G9YWE1_9FIRM/11-109                 .............n-KFLRYLYKCLKQNIAPD.....WN..L..L..APNTk..dFPVHEEYFTYMLAHLLADGYIEGIAEVRRIG...S...PV..QfK..E..TSG...LKITPAGIEYLEEN.......STMERVTEFL------gpagei...........
R9LQ45_9FIRM/11-108                 ..............YKILRYLYECMKNGKTPV.....LE..D..F..SWDSk..lMTIPKRYWMEIVATLIEKGYIEGFAILRNRT...K...DV..G.L..Y..IETdppYKITYEGVGYLNTN.......SRMEKAKEFC------gqa..............
F7V714_CLOSS/20-115                 ..............YAILTELYAAARAGEKVQ.....LA..H..I..SPER....FHIDESYWLDIMCNQVDSGRIKGFKYMNIKT...G...RA..V.I..S..LDD...IGITECSIEFLMEN.......SMMKKVVEALKIAKDI.................
F7V708_CLOSS/1-59                   ..............------------------.....--..-..-..----....-----------MITMIDQGFISGIEYTPTKD...G...IL..F.S..N..LEN...ALITFNGVEYLFDN.......SLMQKLKRTLKDVK--gi...............
Q5FM49_LACAC/22-118                 ..............YKILLYLKYCYENGIEVD.....PD..I..L..SSEN....IGISEKQFVLTLQMLLEDGYIKGVSLKPTIQ...G..pTI..I.C..N..IQD...TYATSSGLQYLIEN.......SMMHKAYKVSKEVRDW.................
B2A5C4_NATTJ/11-106                 ..............FQILERLEKAMDEEQFNW.....EK..E..I..SHEA....LDISETRWTLIIEMMEENNLIKGLNIDRGAK...G...DI..S.I..S..IHS...PRIRLQGLNFLIEN.......SQTAKVINAAKLLKDT.................
F7V702_CLOSS/11-101                 ..............YRILSYLYQQLKDGTEID.....ES..K..I..DEHA....LNIPHSYWIYIFDELQSAKYTKGYTIVNVNG...G...RK..R.L.eH..LDR...AVITLRGVEYLTSD.......QLMIKVKN--------es...............
R5KEQ8_9CLOT/11-73                  ..............FKILTYLYACVKRKTVFE.....EA..A..F..YHAI....GEIEKSYLIDILYMMKNEGLIEGVAVQKVWG...T...--..-.-..-..---...--------------.......----------------eksih............
Q65PQ3_LACJO/11-106                 ..............YKILSYLKYCYEEGQNPD.....LD..I..L..DAPT....FKISNNQFYKTLMMLMDDGYIKGLKFTPTKT...G...TI..V.S..N..MDR...VYITSDGLQYLEEN.......TMMKKAYKIFKEVRDW.................
A0A073IQ60_9BACT/8-84               ..........fvly-----AIYVEYQKDLPN-.....ME..S..V..TAEA....LGIDEDVFNVAVLKLCNEGYITGADPIYVDQl.aY...PV..S.V..D..MSR...VMPTQKGIE-----.......----------------aa...............
#=GC SS_cons                        ............X--------HHHHHHHHHHH.....-S..-..-..-HHH....HTS-HHHHHHHHHHHHHHTSEE--EESSS--...-...SE..E.-..-..SS-...-EE-HHHHHHHHHH.......T-S---XXXXXXXXXX.................
#=GC seq_cons                       ..............aplLphl.tshcpst.s.......p..p..l..s.cs....hslscphattllphLh-cGaIcGlshhpshs...s.......h.h..t..hps...hplThcGlpYLp-N.......ohhtKhhphh.......................
//
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