KEGG   Pseudomonas synxantha LBUM223: VO64_1312
Entry
VO64_1312         CDS       T03769                                 
Name
(GenBank) VgrG protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pfb  Pseudomonas synxantha LBUM223
Pathway
pfb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pfb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VO64_1312
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfb02044]
    VO64_1312
Secretion system [BR:pfb02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VO64_1312
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF6484 DUF2345
Other DBs
NCBI-ProteinID: AKA81858
Position
complement(1457445..1459382)
AA seq 645 aa
MSFKGHEALDQPYFIHMQLISEDPSIDLEALLRQPAYLDFGEGDTGLHGQVYAIGRDDQG
VRFTRYHLTLAPRLAWLAHRRNQRVFQQRNVPQIIATILEHHGILADTYTFELGPVVYPP
RTFCVQYMESDLHFIQRLCEEEGIHFHFRHSTDNHLLVFGDDQTVFRRLPVQRYCSSPDP
ALEARVVQRFDRRLQTRSQRSVRRDFDFEHPSLHLQAQAGATDPLEDYGSPAGFTSRERG
AQLARRGLERHQRDRHRVLGKSDQPALCSGHFLELCDHPDPVCNDLWLLTSVRHEGYQPQ
VLEEAAFGVDRFQGYRNRFTATPWSAVHRPPLKHPKSTISGSQTATVTGPAGEDIHCDAY
GRVKVRFHWDRRDKPDDTSSCWLRVASGWAGDGFGAMVIPRVGMEVLVSFLEGDPDQPLV
SGCLPNALHLPAYPLPQHKTRSVLRSRSSPHGAGANELHLEDRRGEELIYLRAQRDLEQQ
VGRDSRLEVAGQRHEIIRGVSTLRLESEEHRHVDGDRKVTLKAHDHLDVQGDSLTRVGQT
LVIEAGQQIHLQAGASLVIDAGAQLSLKAGGEHLVIQAGSIFSSRTISLGGTPSATHPVG
PVRVDAPISAVQGVIMDLAKQLGADFCPLCEGCREGGCDIVGRAA
NT seq 1938 nt   +upstreamnt  +downstreamnt
ttgtccttcaaaggtcacgaagccctcgaccagccgtacttcattcacatgcaattgatc
agcgaagacccttccattgacctggaagccttgcttcgtcaacccgcctatctggacttc
ggcgagggggatacgggcctgcatgggcaggtctacgccatcggccgggatgaccagggc
gtacggttcacccgttatcacctgacgctggccccccgccttgcatggcttgcccatcgc
cgcaaccagcgggttttccagcagcgcaacgtgccgcagattattgcgacgatccttgag
caccacggcattctcgccgatacctataccttcgagctcgggccggtggtgtatcccccg
cggacattctgcgtgcagtacatggagtccgacctgcacttcatccagcgactgtgtgaa
gaggagggtattcacttccattttcgccatagtacggacaatcatctgctggtgtttggt
gatgaccagacagtatttcgacggttaccggtgcagcgttattgttcatcgcctgatcct
gcgctcgaggcccgcgtagtccagcgtttcgaccggcgcctgcaaacccgcagtcaacgc
agcgtacgccgtgatttcgactttgagcatccttcgctacacctgcaagcccaggccgga
gccacggatcctttggaagactatggctcccccgctgggttcaccagccgtgaacgaggt
gctcaactggcgcgccgcggcctggagcgccatcagcgtgatcgtcatcgagtattgggc
aagagcgatcaaccggcgttatgcagtggtcactttctcgagttgtgcgatcaccccgat
ccagtctgcaacgacttgtggctactgacttcggtacgtcatgagggctaccaaccgcag
gttttggaggaggccgcatttggagtcgacaggtttcaaggctatcgcaaccgcttcacc
gcgacaccttggagcgcagtgcatcgaccgccgctcaagcaccccaagtcgacgatcagt
ggcagccaaaccgcgacggtgaccgggcctgcgggtgaggatatccattgcgatgcctat
ggccgtgtgaaggtgcgctttcattgggatcgtcgggacaagcctgacgataccagcagc
tgttggctgcgggtggcgtccggttgggcgggggatgggtttggcgccatggtcattcca
cgggtgggcatggaagtgctcgtgagcttcctggagggcgaccccgaccaacccctggtc
agcggttgcctgcccaacgcgctacacctgcccgcctaccctttgccgcagcacaagacg
cgcagcgttctgcgtagccgcagttctccccacggagcaggggccaacgagttgcacctt
gaagacaggcgcggcgaagaactgatctacctgcgcgcacaacgcgacctggaacaacag
gtgggccgtgacagccgcctggaggtcgccgggcagaggcatgaaatcatccgaggggtg
agcacgctccggctggaaagcgaggagcatcgccacgtcgacggtgatcgcaaggtaacg
ctcaaggcacatgaccaccttgacgtacagggcgatagcctgacccgagtgggccagacc
ctggtgatcgaagccggccagcagattcatctccaggccggtgccagcctggtaatcgat
gcgggtgcgcaactgagccttaaggcgggcggagagcacctggtgattcaagccgggagt
attttcagcagccgcaccatcagccttggtggcacaccgtcggcaacccatccggtgggc
cctgtgcgggttgacgcgccaatatctgcggtgcaaggcgtcatcatggacttggccaag
caactgggcgcggatttttgccccctgtgcgaaggctgccgagaaggcggctgcgatatc
gtggggagggcggcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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