KEGG   Plasmodium falciparum Dd2: PFDG_00107
Entry
PFDG_00107        CDS       T01051                                 
Name
(Broad) hypothetical protein similar to DNA repair protein rad54
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pfd  Plasmodium falciparum Dd2
Pathway
pfd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PFDG_00107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfd03400]
    PFDG_00107
DNA repair and recombination proteins [BR:pfd03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     PFDG_00107
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD AAA_22
AA seq 1247 aa
MRKYNGNVKRSRDDEYEENENVNGERTSITLVRATLLPILSIGKNEKTTLFHPFKNPLPG
FVSDKTLYLKKTLGVKVRRTGWINLMKNSIPRRSDETEEQEKIEEVIKKHEPLILYKDEN
DKIEVDPILAQYLREHQREGVQFVFECLMNIKDDKISGCILADDMGLGKTLQSITVLYTL
LKQGFHKKCAVRRCLILCPASLINNWNDEISKWIPNRCNVTCVNDNAKEKIVSKLEGFKY
DIQSTVLICSYECFRINNEFLDKSSIDMIICDEAHRLKNDKTKTYTSIYNLTAKKRLLLS
GTPIQNDLGEFYALISLCNPDLFDDINLFRKKFANPILIGRDKDATEKEQEIASERLTEL
SNITNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEALYVLFLKDKKILKNDNTNNKVN
VLINIKKLEKICNHPLLLNVNDIKEIGQVTLWKLIEDVIFEMQTNMKICNRGNKRDNKND
SKSGCVLKVDKSMSSISNNNMKNGNDMNNTNNNTNNNTNNNTNNNTNNNTNNNTNNNINS
NINNNINNNINSNINNNINSNMNNNTNLRCGSRGNQNDASGYVGNKRKPIELDYNKPVKR
IIEECKRDIYRSYYNFSCKFLLLHFLLKNIKQNTNDKVVIVSNYTQTLDYMEILCKENMY
KFVRLDGGINIKKRHKVINDFTHSADIFIFLLSSKSGGCGINLISSNRLILLDPDWNPAN
DKQALARVWREGQKKICYIYRLFCTGTIDEKVYQRQISKDGLSNMIVTTTNLSKDQMSDE
NVKKLFNYKMNTVSETHDNIECNRCNLNGVSPNIHKVAHVDSINKNKSKGKNDNNNNNNN
NNNSNSNGNGNNYKSDDDKNYIDGEHFAEQLEDFEEDDVNTWAHHQNIDTVPDNILIKAV
KDAEEYKKNDMNSMPLLQKLTHDFVTFTMSCKIEYRDDLIKQKSEQAKMREKGASQTNGK
SMKEMKLESQDGKKGKGHKNGKREEDEDEDEFDGDEEDNDEEDEFDDDDDEEEENDDDND
EEDEFVDEEEDDRDESNESDDDVQEVGVHSGLDKIKNTKMENIIESDRDEPSDACRKKLN
ELVQYQRERKKREEEFLNKKREPLSDDDKEKVVCLKEEKSNIKGNIKSNTNNNTNNNTNN
ITNNITNNNINGSASTSTRHDNNIENNNMKKEEEANYGNNSHNKNKNEEKIKNGKDEPSK
RITRNMSHRSLVELLSQDEDSKESLTMSEDIEEMSAENVSTDSSYFI
NT seq 3744 nt   +upstreamnt  +downstreamnt
atgagaaaatataatggaaacgtcaaaagaagcagagacgacgaatatgaagagaatgaa
aatgtgaatggagagcggactagcataacattagtccgagcaactttattaccaatatta
agtataggtaagaatgaaaagacaacattatttcatccttttaaaaatcccttacctggt
tttgtaagtgataagacgttgtatttgaaaaagacattaggtgttaaggtgagaagaaca
ggttggataaatttgatgaagaattctattcctagaagatctgatgaaacagaagaacaa
gaaaagatcgaagaagttataaaaaagcatgaaccgttaattttatacaaagacgaaaat
gataagattgaggttgatcctatattagctcaatatttaagagaacatcaaagagaaggt
gttcaatttgtttttgaatgtttaatgaatataaaagatgataaaataagtggatgtata
ttagctgatgacatgggtcttggaaaaacattacagagtataactgttttatatacttta
ttaaaacaaggatttcataaaaagtgcgctgtacgtagatgtttaatattatgtccagct
agcttaataaacaattggaatgatgaaataagtaaatggattcccaatagatgtaatgta
acatgtgtaaatgataatgcaaaagagaaaattgtaagtaaattagaaggatttaaatat
gacatacaatctactgtcttgatatgttcttatgaatgttttcgtataaataatgaattt
ctagataaatcatcaatagatatgataatatgtgatgaagcacatcgtttaaaaaatgat
aaaacaaaaacatatacaagtatttataatctcacagcaaaaaaaaggttattattatca
ggaactccaatacaaaatgatttaggagaattctatgctttaatatctttatgtaatcct
gatttatttgatgatataaatttgtttaggaaaaaatttgcgaatcctatattgataggt
agagataaagatgctacagaaaaggagcaagaaatagcatctgaacgtttgacagaatta
tctaacattacaaataaatttatattaagaagaacaaataatttattatctaaagtatta
ccagtcaaatatctcatcaatatatttattaaattaaatcctattcaggaagctttatat
gtgttattcttgaaggataaaaaaatattaaaaaacgataatactaataataaagtgaat
gtattaataaatataaagaaacttgaaaagatatgtaaccacccattattattaaatgta
aatgacataaaggaaattggacaagtaacattatggaaattgatagaagatgtaatattt
gagatgcagacaaatatgaagatctgtaataggggtaataaaagagataataaaaatgat
agtaaaagtggttgtgtgttaaaggtcgataagagtatgtcgtcaataagtaataataat
atgaaaaatgggaatgatatgaataatacaaacaataatacaaacaataatacaaacaat
aatacaaacaataatacaaacaataatacaaacaataatacaaacaataatataaacagt
aacataaacaataacataaacaataacataaacagtaacataaacaataacataaacagt
aacatgaacaataatactaatttaaggtgtggtagtaggggtaatcaaaatgatgcctcg
ggttatgtaggaaataaaagaaaaccaattgaattagactacaataaacctgtaaaaaga
attattgaagaatgtaaaagagatatttatagatcgtattataatttttcatgcaaattt
ttattattacattttttattaaaaaatataaaacaaaatactaatgacaaagtagtgatt
gtaagtaattatacacagacattagattatatggaaatcttatgtaaagaaaatatgtat
aaatttgtacgtttagatggaggaataaatataaaaaagaggcataaagttataaatgat
tttacacattctgctgatatatttatatttcttttatcttctaaatcaggaggatgtgga
ataaatttgataagttcaaatcgtttaattttgttggatcctgattggaatccagctaat
gataaacaagctttagcaagagtgtggagagaaggtcagaaaaaaatttgttatatatat
cgtcttttctgtacaggtactatagatgaaaaggtatatcaaagacaaataagtaaagac
ggcttatctaatatgatagtaacaactacaaatttgtcaaaagatcaaatgtcggatgag
aatgtaaagaaattgtttaattataaaatgaatactgtatcagagactcatgataatatt
gaatgtaaccggtgtaatttaaatggggtgtccccaaacatacataaggttgctcatgtt
gattcgattaataaaaataagtctaaaggtaaaaatgataacaacaataataataataat
aataataatagtaatagtaatggtaatggtaataattacaaaagtgatgatgataagaat
tatattgacggtgaacattttgctgaacagctagaagacttcgaagaagacgatgttaat
acttgggcacaccatcaaaatatagacacggttcctgacaatattttaataaaagcagta
aaggatgctgaagaatataagaaaaatgatatgaatagtatgccacttcttcaaaaactt
acacacgattttgttaccttcaccatgagctgcaaaatagaatatagagatgatttgatc
aagcaaaagtcggagcaagctaagatgcgggagaagggggccagccagacaaatgggaag
agcatgaaagagatgaaattagagtcccaagatggtaaaaaggggaagggacataaaaat
ggtaaaagagaagaagatgaagatgaagatgaatttgatggtgatgaggaggataacgac
gaagaagatgaatttgatgatgatgatgatgaggaggaggaaaacgacgacgataatgac
gaagaagatgaatttgttgatgaggaagaggacgatcgtgacgaatcaaatgaatctgat
gatgatgtgcaggaagttggtgtccattcaggattggataaaataaaaaatacaaaaatg
gagaatattattgagagtgatagggacgagccgagtgatgcatgtcgaaagaagcttaac
gaattggttcaatatcagagggaaaggaaaaagagagaggaggaatttttgaataaaaag
agggagccgttaagtgacgacgacaaggaaaaggttgtgtgtttaaaggaggaaaagagc
aacattaaaggaaacattaaaagcaacactaataacaacactaataacaacactaataac
atcactaataacatcactaataataacattaatggtagtgctagtactagtactagacat
gataacaatattgagaataataacatgaagaaggaggaggaagcaaattatggtaataat
tctcacaataaaaataaaaacgaagagaaaatcaaaaatggtaaggatgaaccatctaaa
agaattacaagaaatatgagccacagaagtttagttgaacttctttctcaagatgaagat
tcaaaggaaagcttaaccatgtcagaggatatagaagaaatgtccgccgaaaatgtaagt
actgatagttcgtattttatatag

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