KEGG   Plasmodium falciparum Dd2: PFDG_00542
Entry
PFDG_00542        CDS       T01051                                 
Name
(Broad) conserved hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pfd  Plasmodium falciparum Dd2
Pathway
pfd03020  RNA polymerase
pfd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFDG_00542
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFDG_00542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfd03021]
    PFDG_00542
   03400 DNA repair and recombination proteins [BR:pfd03400]
    PFDG_00542
Transcription machinery [BR:pfd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PFDG_00542
  RNA polymerase III system
   RNA polymerase III
     PFDG_00542
  RNA polymerase I system
   RNA polymerase I
     PFDG_00542
DNA repair and recombination proteins [BR:pfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PFDG_00542
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat
AA seq 205 aa
MEDPVTRFYKCRKTCCEMLEDRGYIMTPREKLENFSTFKEMFEDNDRQRSKMGISTTHKN
DSNNRIIVYFADEVKKTGVKPLRELTERMEEKSIQRAILVTQNILTPFARDAIKEAAPRH
IIENFLDTELLVNITKHELVPRHIPLTSDEKKNLLQRYKIMENKLPRIQDVDPVCRYFGL
SKGQVVKIIRPSETAGRYVTYRLVV
NT seq 1483 nt   +upstreamnt  +downstreamnt
atggaagatccagtaacgaggttttataaatgtcgaaaaacgtgttgtgaaatgttggag
gataggggttatattatgactccaagagaaaagcttgaaaacttttcaactttcaaagaa
atgtttgaggataatgatagacagtaatacaaaatatatgagaatattatatgctatata
tagatatgtacatacatgtaaatatatatatatatatagtatgttctcttatcatatatg
atcttttttatttgtctttgatcttatagacgatctaaaatgggtattagtactactcat
aaaaatgattcaaacaatagaattatagtttattttgctgatgaagttaaaaaaacaggg
gttaaaccactaagggagtaagtcaaaaataaatatataaataatttaataaataaaaca
aacacaaatatgataaaataatataatgataaaatgataaaatgataaaataattatata
aaaaccgtttgttatttattcatcttattttttattttatgttttatgttttattttttt
ttttattccttataatagattaaccgaaaggatggaagaaaaatcaattcagcgtgctat
tcttgtaacacaaaatatattaaccccttttgccagagatgtaagttaatatatagatat
acatgcttatttacaaaaataaaaaaaatatattaaatatatatcatcctatattttttc
tatatttgttttttttcctataggccattaaggaagcagcaccaagacacattatagaaa
actttttggatactgaattattggtaaaaaataaacaaacaaacaaaaaattaattaata
taaaataaactataattattaaaatatatatatatatatatatattttttttttattgtt
tattaaaattttcataggttaatataacaaaacacgaattagtccccagacatattcctc
taacaagcgatgaaaaaaaaaacttgctccaaagatataaagtaaaaataataaataaat
aaataaatatatatatatatattatttaatacttaaatttatatgtacaattaaatatat
atatatatatatatatatattttttttttttttttgaattgctttattttttagattatg
gaaaacaaattaccaagaattcaagatgtcgatcctgtgtgtcgttattttggattatca
aaaggacaggtaaaataaataaatgaacaaataaaaatcattaaatagaaataatattgt
atataatcaaagaatgttcactgtacaaatgagtaaaatatctttatatataagattgtg
atatattaatactgtatttattcccatcccatatatatatatatatatatatatatattt
atatatatatacatatatttctatttttattatttaggttgttaaaattattaggcctag
tgaaacagcaggaagatatgttacctacagattggtagtgtaa

DBGET integrated database retrieval system