KEGG   Pseudomonas ogarae: PSF113_5855
Entry
PSF113_5855       CDS       T01734                                 
Symbol
uvrD
Name
(GenBank) UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pfe  Pseudomonas ogarae
Pathway
pfe03420  Nucleotide excision repair
pfe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PSF113_5855 (uvrD)
   03430 Mismatch repair
    PSF113_5855 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfe03400]
    PSF113_5855 (uvrD)
Enzymes [BR:pfe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PSF113_5855 (uvrD)
DNA repair and recombination proteins [BR:pfe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PSF113_5855 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     PSF113_5855 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor AAA_11 Viral_helicase1 AAA_22
Other DBs
NCBI-ProteinID: AEV65829
Position
6766877..6769060
AA seq 727 aa
MRDDLSLLLNSLNDAQRQAVAASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACQRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHVLVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSADFPDAEVIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLIEGRGNDAALERVINVPTRGI
GEKTVEAIRDHARHSHVSMWEAMHQLVANKGMTGRAAGALKAFMDLIEDLAAKCGEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFESTEEDEDLTPLSAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQSTSSLFGGSNIPETGFSLGQTVRHSVFGDGVILNFEGAGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgtcaggccgta
gccgcctccgtgggtcgtcagttggtcctggccggtgccggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcctcgccccattcgatcctg
tcggtgacgttcaccaacaaggccgcggccgagatgcgtcatcgcatcgagcaactgatg
ggcatcaaccccgccggcatgtgggtcggcacgttccacggcctggcgcaccgcttgttg
cgggcgcattggcaggaggccgggctgagccagaccttccagatcctggacagcgacgac
cagcagcgcctggtcaagcgggtgatccgcgagctgggcctggacgagcagcgctggcca
gcccgccaggcgcaatggttcatcaacggccagaaagacgaaggcctgcgtccgcagcac
atccaggccagcggcgacctgttcctggcgaccatgcgcagcatctacgaagcctacgag
gcggcgtgtcagcgtgccggagtcatcgacttctccgagctgctgctacgggcactggac
ctgtggcgcgaccacccaggcctgctggcccattaccagaagcgcttccggcatgtactg
gtggacgaattccaggacaccaacgccgtgcaatacgcctggttgcgcctgctcgccaag
ggcggtgacagcctgatggtggtgggtgacgacgaccagtcgatctacggctggcgcggc
gccaagatcgagaacatccaccaatactcggcggacttcccagacgccgaagtcatccgc
ctggaacagaactaccgctccaccgccggcatcctcaaggccgccaatgccctgatcgcc
aacaacaccgggcgcctgggcaaggaattgtggaccgacggcggcgaaggcgaagcgatc
aacctctacgccgccttcaacgagcacgacgaagcccgctacgtggtggaaaccattgaa
agcgcgctgaaaaccggcctggcccgcagcgatatcgccatcctgtaccgttccaacgcc
cagtcgcgggtgctggaagaggccttgctgcgcgaacggatcccctaccgcatctacggc
ggccagcgcttcttcgagcgtgctgaaatcaagaacgccatggcctacctgcgcctgatc
gaaggacgcggcaacgacgcggccctggaacgggtgatcaacgtgccaacgcggggcatc
ggtgagaaaaccgtcgaggcgattcgcgatcacgcgcgccacagccacgtgtccatgtgg
gaagccatgcaccaactggtcgccaacaaaggcatgaccggtcgcgccgccggtgcgctg
aaggccttcatggacctgatcgaggacctggccgccaagtgcggggagatgccgctgcac
ttgatgacccagaccgtcatcgagcaatccggcctgatcgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtggaaaaccttgaggaactggtcagcgccgcgcgcaac
ttcgaaagcaccgaagaagacgaagacctgacgccgctgtcggccttcctgggtcacgcc
tccttggaggccggcgacacccaggccgacgagcatgaagacagcatccagctgatgacc
ctgcacagcgccaagggcctggaattcccctacgtattcctcgtgggtatggaagagggc
ctgtttccccacaagatgagcctggaagaaccgggacgcctggaagaggaacgacgcctg
gcctatgtcggcatcacccgcgccatgcagaatctggtcatgacctacgccgaaacccgg
cgtttgtatggcagcgagacctacaacaaggtgtcgcgcttcgtgcgtgaagtcccgaag
ggcctgattcaggaagtgcggctgtccaacagtgtcagccgaccgttcggtggcggccag
caacaaagcaccagcagcctgttcggcggcagcaacatcccggaaaccgggttcagcctc
ggccagaccgtgcggcattcggtattcggcgacggcgtgatcctcaacttcgagggtgcc
ggcgcccaggcgcgggtgcaggtgaacttcagcgaaggcagcaagtggctgatgctgggg
tatgccaagctggaagcgatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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